Cten126210.1
Basic Information
- Insect
- Ceriagrion tenellum
- Gene Symbol
- -
- Assembly
- GCA_963169105.1
- Location
- OY720642.1:41468371-41470086[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-13 3.9e-09 39.0 0.0 1 35 18 53 18 60 0.92 2 2 6.8 3.7e+04 -2.5 0.0 16 23 141 148 137 149 0.81
Sequence Information
- Coding Sequence
- ATGCCGAGGAATCCTAAACGTGCTCTTGGAACACGGCATTACAGGAATTATACCGAGGACAGTTTAAACGATGCCTTGCAAGcgataaaaaacaaaactttgtcgaTTCGTCAAGCATCTTCAAAATTTGGAATTccaaaaaatacattacatctgAAGAGCCAGGAGAAACACACCAAACCTGTGGGTCGGGCTCCTGTTTTTACTCATGAAGAGGAGCTACAATTTGTGGGTCACATAATTACTGTATCAAACTATGGTTTCCCTGTGGATACGGTCGATCTTCGGTGCATCGTCAAGTCTTATCTGGACCGCTGTGGAAAGGAGGAGGttcgttttaaaaataactatCCAAGACATGATTGGGCAGAGGGCTTTATGGCACGACACAAATCAGTGCTAACAAAGACGAGTGTgaaaaacatctctctctctAGAGCAGCCACAGATGAAGAGGtggtaaataacttttttgataatttagaaCTGGAACTGAGTGGGATTCCTCCgcaaaacatttataattatgaTGAGACAAATCTTGTTGACGATCCTGGTGCAGGAAAAATCATTACAAAGAGGGGAAACAAGTATTCTGAGAGGATACAAAATTCATCAAAGGCATCCACCTCAATCATGGTATGCGGGAATGCAGCAGGGGATATAACACCACCTTACATAAACTACAAGGCGGAAAAGATTTGGACAACCTGGACCGAAAATGGTCCCTCCGGAGCTCGTTACAACAGGACCAAATCAGGTTGGTTCGATGGGAATACATTTGAGGATTGGTTCATATCATTACTACTGCCTATTCTGAAGCACCGGGACGGACCGAAAGCTATCATCGGCGATAACCTTAGTTCCCACATTAATATTGAGGTACTGTGGCTTTGCAAGAACAACATAAAATTCATAGCTCTTCCCTCGCATTCTACGCATCTCCTGCAGCCATTGGATGTGGCATACTTTCACTCGATGAAAGGTGCCGGGAGGAAAGTGCTGAAAGAGTGGAAGGAGACAGCTGCTGGAAGTCGGTGTAAATCAGTGCCCAGGGACCAATTTCCCACACTTCTGAAGAAACTCTGGGATAACTTACTCACTGGTCCAAATAACTTAATCGCTGGATTCCGTAAGTCGGGAATTTACCCTATTGACAGGCAGCCAGTCCTGAAAAGGTTGCCTTCGCAGAGCCTGGATTCATCAGTTTCTTCTGTTGTTGGGGAAAGCTTCTTAGAACAGATTAttaagaaacaggaagaagcgacCAAAGGATGCAATCGAACCAACAGAAGGAAGAAGCTGAACGTCCCCCCAGGAAAAAGTATTTCAGCAGAAGAACTTAATTCTACAGCAACATGTGAACCCAATCCTTCGACATCCAGCGGTATGCAAGGAGGACAGCGAATACGGCAGCATAAGAGACAAAGAAGAGAGAGCAGCAGCAGCGACAATGATGGAAGCGGTGATATATATTTACAAGACAGTGACGACAGTGTGACATTAAATGAAGACTTTTCCATTGACTTCAATGACGATCCCACCACCTCAACATTATGCCCACAACCTGAAAGTACAGGTAGCCTCCAGAATCTCGCTGTGGGACAATACGTTCTGGTGAATTACGAGGGTGAACTTTACCTAGGACAGATCAAGGAGATAAAAAACATTGACGAAATACTCATCAATGCCATGAAGAAATCCGGAGCCCATTGA
- Protein Sequence
- MPRNPKRALGTRHYRNYTEDSLNDALQAIKNKTLSIRQASSKFGIPKNTLHLKSQEKHTKPVGRAPVFTHEEELQFVGHIITVSNYGFPVDTVDLRCIVKSYLDRCGKEEVRFKNNYPRHDWAEGFMARHKSVLTKTSVKNISLSRAATDEEVVNNFFDNLELELSGIPPQNIYNYDETNLVDDPGAGKIITKRGNKYSERIQNSSKASTSIMVCGNAAGDITPPYINYKAEKIWTTWTENGPSGARYNRTKSGWFDGNTFEDWFISLLLPILKHRDGPKAIIGDNLSSHINIEVLWLCKNNIKFIALPSHSTHLLQPLDVAYFHSMKGAGRKVLKEWKETAAGSRCKSVPRDQFPTLLKKLWDNLLTGPNNLIAGFRKSGIYPIDRQPVLKRLPSQSLDSSVSSVVGESFLEQIIKKQEEATKGCNRTNRRKKLNVPPGKSISAEELNSTATCEPNPSTSSGMQGGQRIRQHKRQRRESSSSDNDGSGDIYLQDSDDSVTLNEDFSIDFNDDPTTSTLCPQPESTGSLQNLAVGQYVLVNYEGELYLGQIKEIKNIDEILINAMKKSGAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00943647;
- 90% Identity
- iTF_01384552;
- 80% Identity
- -