Msep258517.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- Rel
- Assembly
- GCA_034769895.1
- Location
- CM068375.1:232884242-232890110[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.23 1.5e+04 -0.1 0.1 123 147 39 63 22 81 0.63 2 2 2.5e-24 1.6e-19 74.6 0.1 1 87 100 192 100 197 0.91
Sequence Information
- Coding Sequence
- ATGACAGATTTTATGAAAAGTGTCAGAACAGGCGAAGAATTGTGGATTTTTGAGTGTGATCCAGAAACAAAATGGCAAAGTGAAGAGTGGCACACAAAAGACTCGCCACACCCAAAAAAAAGCAAGAAAGAGCAAATCCAAGAGCAAGTCAATGCTCATTACCTTTTTTTGACATTCGAGGTATTGTGCATAAGGAATTTGTGCCTCAAGGACAGAAAGTTAATCAAACTTACTACCATCAGGTTCTTGAGAGACTCAGAAAAAGGGTCATTCATGTCCGGTACAAATAGGCCATTCCTAAAGATAGTAGAGCAAGCTTCACCTAAATTTCATTTCCGATACAGATCGGAAATGCAAGGAACTCATGGTGCCATACAGGGGGAAAAAGCATCCAAACAAAAGAAGACTTTTCCTACCGTTAAGCTTTGTAATTTCGACAACATAGCTTTTATTCGATGTACTTTATATTCTGCGGACGAAAACAACAGGCATATACATGCCCATCGCTTAGTGGCGAAAGGCCCAGAGAAGAAGGAAGATAAGGATGATCCACATGATATAAAAGTGGGACCATTTAATAATTACGAAGCTTGGTAA
- Protein Sequence
- MTDFMKSVRTGEELWIFECDPETKWQSEEWHTKDSPHPKKSKKEQIQEQVNAHYLFLTFEVLCIRNLCLKDRKLIKLTTIRFLRDSEKGSFMSGTNRPFLKIVEQASPKFHFRYRSEMQGTHGAIQGEKASKQKKTFPTVKLCNFDNIAFIRCTLYSADENNRHIHAHRLVAKGPEKKEDKDDPHDIKVGPFNNYEAW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -