Mleu016915.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- -
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000020.1:616914-618299[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.2e-06 0.13 13.2 0.0 27 49 178 200 170 205 0.92 2 5 0.007 1.1e+02 3.8 0.1 20 48 231 258 222 262 0.86 3 5 0.032 5e+02 1.7 0.1 20 43 259 282 255 286 0.73 4 5 4.9e-06 0.076 13.9 0.5 22 53 289 320 279 321 0.90 5 5 0.0012 19 6.2 0.1 6 49 326 369 324 372 0.92
Sequence Information
- Coding Sequence
- ATGGATCGAAAAATCTGTCGAATTTGTTGCAAGAACGATGGCAGTGTTTATTTATTCGACAATAATGATGTACTTCGAGTGAGCgacaaaataatgtattgttgTGCAAAAATAAGTGTTGATGAAAGCGACGGTTTACCGACTCACATCTGTGGCGATTGCGAGGTGGAACTGGATGCTTCGTACCACTTTGTATTAAAATGTGAGGCAACCGATCAGCAACTGAGAACGCCACGTCTAATAAACATTGAACAGATAGATAACGAAAACGAATACGAACTAACCTCTAAATTAAAGTCAGAGTATAAATTGGAAAAAGAAGATAGCGACTGTATAGACGACAATACGTGCGATAATGACGATTACTCAGAACTTCTGACCTTAGAAACACCTAcagataaattaaaatgcgaaatAAAAGTGAAAAGGAAACAAGATTCATACAAATGTAAATGCAGTCATGTGTGTGCGAATATCTCTGAATTAACAGCACACAAGTGTCTTTCGTCGACTGTCTTAAAGTCTTACCCTTGTACAGTATGTGATAAAGTGTACAAACAGAACGAATCATTGAAAAGACATGTAGAACGTAATCATTTTAAGGGTACAAGACCCCGTAACTTCATTTGTGAGTTTTGCGGTAAAAAGTTCATGTCTAAGAATTCTATGAAAACACACAGGAGAATCCACACTGGAGAAACCCCTTTTGCTTGCCCTGAATGTCCCAAGAAGTTCTCTCAGTACGGCTCTCTGATACGTCACAAATTGAGACATTCGGGAGAAAAACTACATGTATGTCCTATCTGCAGCAAAAAGTTTTACGGCAAGTTAGAATTACAACGCCACGGTGCAGTGCATACAAATGAGCGAAAATTTACCTGCCCCATATGTCCCATGGCCTTTAAATGCCAAAgcaatttaaaaatacacataaCAAAAAGGCACTCCATAAAATCTGGGTACTGCAATATATGTTCGAAACATGTGCCTAATATGGAGTCTCATATCTCGCGTCACAATGGGGAGCGGAaatttcaatgtgaactgtgtccGTCTAGCTTTTATGGCCAGCAAGGTTTGACTTTACACGTCAACTTCAAGCATTTAATGACCGGGAGATTTAAATGCTCTGAAAGTGGTTGCGATTCTGCATTCCCTTCAAAATCAATGCTGGCTTTGCATAAACTTAAACATGATAATGTCACACCATATCCCTGTGATAGGTGCCCTAGGTGTTTTTACAGAAAGATTGATCTGTGCAAACATAAGTTAGGCACTCATAAAGAAAAAGTTCTAGATTAA
- Protein Sequence
- MDRKICRICCKNDGSVYLFDNNDVLRVSDKIMYCCAKISVDESDGLPTHICGDCEVELDASYHFVLKCEATDQQLRTPRLINIEQIDNENEYELTSKLKSEYKLEKEDSDCIDDNTCDNDDYSELLTLETPTDKLKCEIKVKRKQDSYKCKCSHVCANISELTAHKCLSSTVLKSYPCTVCDKVYKQNESLKRHVERNHFKGTRPRNFICEFCGKKFMSKNSMKTHRRIHTGETPFACPECPKKFSQYGSLIRHKLRHSGEKLHVCPICSKKFYGKLELQRHGAVHTNERKFTCPICPMAFKCQSNLKIHITKRHSIKSGYCNICSKHVPNMESHISRHNGERKFQCELCPSSFYGQQGLTLHVNFKHLMTGRFKCSESGCDSAFPSKSMLALHKLKHDNVTPYPCDRCPRCFYRKIDLCKHKLGTHKEKVLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00943125;
- 90% Identity
- iTF_00943125;
- 80% Identity
- iTF_00943125;