Mleu018750.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- egg
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000022.1:5826664-5848672[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.62 2.4e+03 -1.0 0.0 29 38 41 50 11 52 0.65 2 2 9.3e-16 3.6e-12 46.5 0.0 4 75 82 146 79 148 0.89
Sequence Information
- Coding Sequence
- ATGATTTTGTTAACGCAGCAAGACCTACACCGTCAACGCGCTGTTGCCAAGAAGTCTGTTAGCTCCAGCCAGGTCGCCATACCGTCGTCACTGCCGGCCGCAGCCGGGAGCCTGGACAATGTCACCAGTAGAGTTGTGTACTACACGCCCAAGAACGCGGTGCGGCCGCACAAGATGGTGCCTCACTCCTGCAGCGCCGTGTGCAAGCGGACCGACGTGCTGCCCCTCAAGGAACTGCGCACCTACAACCCGCTCGCCAAGCCTCTGCTGAGCGGCTGGGAGAGACAAATAGTCCGCTACAAGGGTCAACGAGAGGTGATATACCGCGCCCCTTGCGGCCGCCGCCTGCGGAACATGCCCGAGCTGCACCGGTACTTACGTGCCGTACAGTCCGACATGCCCGTCGACCTGTTCGACTTCTCGCCCGCCACGCACTGTCTGGCAGAGTTCGTCATCAACAAGTGTCTCGTTTCCaagaagGACTTGTCCCACGGCAAGGAGAACGTGCCGGTGCCGTGCGTGAACTACTACGACGAGTCGCTGCCGGAGTTCTGCTCCTACAACACGGAGCGGACCCCCACGGCCGGGGTCCCGCTCAACCTGGACCCCGACTTCCTCTGCGGCTGCGACTGTCAGGACGACTGCGAGGACAAGTCGAAGTGCGCCTGCTGGAAGATGACCCTGGAGGGCGCGCGCACCATCGGCATCGACGGCGCCCACGTCGGGTACCGCTACCGGCGGCTGCCCGACCCGCTGCCCTCCGGCATATACGAGTGTAACTCCAGgtgtAAATGCAAACACACGTGCTTGAATCGTGTCGCGCAGCATCCTCTACAGTTAAAACTACaggTATTCAAGACATTGAACCGCGGCTGGGGTATCCGCGCACTGAACGACGTACCTAAAGGCGCCTTCCTATGCGTTTACGCCGGGAACCTTCTCACCGATGCCACTGCCAATTTGGACGGCCTGAACGAAGGCGACGAGTACCTGGCCGAGCTGGATTACATCGAGGTGGTGGAGCAGATGAAGGAGGGCTACGAAGAGGACATACCCGACTCCATCAAGAATTTGGATAAGAAAGAAGTAGAGAAGTTGCAGGAGGAAGAAGACGATAGCGAGCCATCCTCAGAGGAAGAACAACCGAAGTCCAAGACTGAAGAGGACCACGACTTCAGGCCTGGGTACATTGGGCTGGGTGTTGCCGCGTTTAGCAAACGTCTCCGCAAACGCGAcaagaagaaagaaaagaatggaaagaagaaagaaggaaACGCAGAGGATGAATGTATTACTATAAGTGACGACGATGAACAGAGAGAACCGTCGAGATTCGCAGCCGCCGACGGAATGGGCGCCAATCAATTCGTTTCTAAATACAGTTCCGTGCGTACGTTGTTCGGTGAAGACGAAGCCTGCTATATTATGGACGCTAAGGTTCAGGGCAACATCGGACGATATCTGaatCACTCGTGCTGCCCAAACGTGTTCGTACAGAACGTGTTTGTGGACACCCACGACCCAAGGTTCCCTTGGGTCGCGTTCTTCGCGCTATCCTACATCCGCGCCGGCACCGAGTTGACCTGGAACTACAATTATGACGTGGGTTCGGTGCCCGGCAAGGTTTTGTACTGCTACTGCGGCGCGGACACCTGTCGTGGACGATTATTGTAG
- Protein Sequence
- MILLTQQDLHRQRAVAKKSVSSSQVAIPSSLPAAAGSLDNVTSRVVYYTPKNAVRPHKMVPHSCSAVCKRTDVLPLKELRTYNPLAKPLLSGWERQIVRYKGQREVIYRAPCGRRLRNMPELHRYLRAVQSDMPVDLFDFSPATHCLAEFVINKCLVSKKDLSHGKENVPVPCVNYYDESLPEFCSYNTERTPTAGVPLNLDPDFLCGCDCQDDCEDKSKCACWKMTLEGARTIGIDGAHVGYRYRRLPDPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQVFKTLNRGWGIRALNDVPKGAFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPDSIKNLDKKEVEKLQEEEDDSEPSSEEEQPKSKTEEDHDFRPGYIGLGVAAFSKRLRKRDKKKEKNGKKKEGNAEDECITISDDDEQREPSRFAAADGMGANQFVSKYSSVRTLFGEDEACYIMDAKVQGNIGRYLNHSCCPNVFVQNVFVDTHDPRFPWVAFFALSYIRAGTELTWNYNYDVGSVPGKVLYCYCGADTCRGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695622;
- 90% Identity
- -
- 80% Identity
- -