Mleu000128.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000001.1:2872210-2894132[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.11 3.3e+03 -2.2 0.1 175 194 62 81 29 104 0.64 2 3 3.8e-79 1.2e-74 252.1 25.4 1 269 122 384 122 402 0.90 3 3 0.62 1.9e+04 -4.7 17.0 1 49 403 450 403 476 0.73
Sequence Information
- Coding Sequence
- ATGGGAAAACATAATAAGTTGGCGACGCCCGAAAATAGCGAAGAGGAGAGCGGTGATGTCTTCACGGATGGTGATTTTGAGGATTCCGACGATGACACCACAGCTGAACGTAATGAAGCCACCGTTAATTCGAAAATTCCTGTAAATGAAACCGAGAACGGCGAAATTAAAAGCGAGAACAGTAATACCAGCGTCAACGGTCTAATCTTAAAAACTAATGGCGTAGAAAATGGTGATGATACAGCTGTAATCAAAGAATCGAATGTTCTCAGTAACGGTGACAATACAACGGAAATACGAAGAGACTCTCACGGGGACAACAATCCGTCGATAGTTGGAATTCTTGGTGACCAACACAACCATGCGGAGCAGCGGCTAGCGGCACGTAGGGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTCGAGCGTCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGATATGTATGCAGAGACGGTGGGACGACGCGGCGGTACGCGGCTGGCCATGAGCCCCGGCGCCCTGCACTCACCGCGGCGGAGTTCCGAAGACTCCGTTGATGACGTGCTCAGCTTAAAAGATCTTAGGCACGAGCTCAAAGAAGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCACAGTTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTGAAGGACAGGATAGAGGAACTGCACGAAGAGTACGCGCAGTTACAGCGCGAGCACAAAGAGAAATGTTCGTCACACGAGCGCCTAAAACGCGAGCACGCCACCCTGGAGCGCGAGGTGAGCGCGGCGCGGGACGCCATCAGGGCGCGCGacgcggccgccgccgccgcgggcTTCGCCTTCGTGGAGGCCTCCACCGCCGCCGACCGGGCCGCCGGCGAGGGCTTCGGCTCCGTCCCGCCGCTCGCACTAGTCTCACACGAATCGGAACAGTTGCTGAATGACGCCGGCGAAGGCACGCTGGATGTGCGGTTGCAGAAGTTAGTAGGTTCGAAGCAGGCGCTGGAGTCGGAGGTGCGGAAGCTCAAACTGCAGTTGAACGAGGAACGGGCGGCGAGGCAGAACGGCGTCGCCTCGCATCACGACAGAGATCATGAGACCGAATTGGAGACCCTCCGGAAGTGCGCGTCGGAGGCGAAGGCGCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCCGGCGCGGCGCGGCTGGAGGCGCAGGTGGCCCGCCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCAAGAGAAGCCCTGAACCGAGTCGAAGAGTTGGAGACCGAGAATAGTCATTTGACAAAACGGCTGGACAAACTGAAGAATGCCAAGTCCGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MGKHNKLATPENSEEESGDVFTDGDFEDSDDDTTAERNEATVNSKIPVNETENGEIKSENSNTSVNGLILKTNGVENGDDTAVIKESNVLSNGDNTTEIRRDSHGDNNPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAMSPGALHSPRRSSEDSVDDVLSLKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSHERLKREHATLEREVSAARDAIRARDAAAAAAGFAFVEASTAADRAAGEGFGSVPPLALVSHESEQLLNDAGEGTLDVRLQKLVGSKQALESEVRKLKLQLNEERAARQNGVASHHDRDHETELETLRKCASEAKARAARAEAEAALQAAGAARLEAQVARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -