Mleu014495.2
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- UBE2O
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000016.1:17119791-17154213[-]
Transcription Factor Domain
- TF Family
- HMG
- Domain
- HMG_box domain
- PFAM
- PF00505
- TF Group
- Other Alpha-Helix Group
- Description
- High mobility group (HMG) box domains are involved in binding DNA, and may be involved in protein-protein interactions as well. The structure of the HMG-box domain consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin. Many of these proteins are regulators of gene expression. HMG-box proteins are found in a variety of eukaryotic organisms, and can be broadly divided into two groups, based on sequence-dependent and sequence-independent DNA recognition; the former usually contain one HMG-box motif, while the latter can contain multiple HMG-box motifs. HMG-box domains can be found in single or multiple copies in the following protein classes: HMG1 and HMG2 non-histone components of chromatin; SRY (sex determining region Y protein) involved in differential gonadogenesis; the SOX family of transcription factors [1]; sequence-specific LEF1 (lymphoid enhancer binding factor 1) and TCF-1 (T-cell factor 1) involved in regulation of organogenesis and thymocyte differentiation [2]; structure-specific recognition protein SSRP involved in transcription and replication; MTF1 mitochondrial transcription factor; nucleolar transcription factors UBF 1/2 (upstream binding factor) involved in transcription by RNA polymerase I; Abf2 yeast ARS-binding factor [3]; yeast transcription factors lxr1, Rox1, Nhp6b and Spp41; mating type proteins (MAT) involved in the sexual reproduction of fungi [4]; and the YABBY plant-specific transcription factors.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.5 3.3e+03 -0.7 0.0 16 31 784 799 781 801 0.88 2 15 1.7 1.6e+03 0.4 0.0 16 32 832 848 828 851 0.86 3 15 3.5 3.3e+03 -0.7 0.0 16 31 880 895 877 897 0.88 4 15 5.4 5.1e+03 -1.2 0.0 17 31 977 991 973 993 0.87 5 15 3.5 3.3e+03 -0.7 0.0 16 31 1024 1039 1021 1041 0.88 6 15 3.5 3.3e+03 -0.7 0.0 16 31 1072 1087 1069 1089 0.88 7 15 3.5 3.3e+03 -0.7 0.0 16 31 1168 1183 1165 1185 0.88 8 15 3.5 3.3e+03 -0.7 0.0 16 31 1216 1231 1213 1233 0.88 9 15 3.5 3.3e+03 -0.7 0.0 16 31 1264 1279 1261 1281 0.88 10 15 3.5 3.3e+03 -0.7 0.0 16 31 1312 1327 1309 1329 0.88 11 15 5.4 5.1e+03 -1.2 0.0 17 31 1361 1375 1357 1377 0.87 12 15 3.5 3.3e+03 -0.7 0.0 16 31 1408 1423 1405 1425 0.88 13 15 3.5 3.3e+03 -0.7 0.0 16 31 1456 1471 1453 1473 0.88 14 15 5.4 5.1e+03 -1.2 0.0 17 31 1505 1519 1501 1521 0.87 15 15 0.024 23 6.3 0.0 17 41 1553 1577 1548 1579 0.88
Sequence Information
- Coding Sequence
- ATGGCGGGGCAGAATCCTGGTTCGCCCACTGACTTTCAGTTTTTCTATGAGGATGAAGTGTATAAAATCAACAACCGCGGGCAAGTCGTCTTCGGTCTGGTACTCGAAAACTACGAAGCGAATTCGAGTGATCAGGAGAGCGACATTGAAACACCCATTCAGAAAGGTGAAATTCGCGTTGTGTGGCACCCTTCTGGAGCTGAGCGGGTGATATCGGAGAAAACGGTTGGCCTCGCCGACCGTTCTCTAATGCCGGGCGATGTGGTGCGCCGTCTCATCGCCGGCAAAGACACCCAGCGCGGCTACTGTCGCGACATCGAAATGACGGCTGCACTGCAGATTGTCGGCACCAAACACGTCATCCCGTGCGTCGCCAGCGAACGTCTTCAGCCCTTAGAAGACTTCACCCCTGATTTAGCCGTTTGCATGGACTCCTGGGTTGGAACTTCTAAGTCTGTCCACAGTAAGCTGCGTCTGGTGTCAGCGGACGGCTCCAGGCTAGAATACTTGGATCTGGACACCTGCCCATTGGAGGACTACTCCAACCGTCGTCGGCGTTCAACACCCTACACCTCGTCGGAATACTACCCCGGTCAAGTCGTGTTCGGTCCCCTTGGCTCACTGGACAATGCGAACTGGCTCCACATGACCAAGGAGATGAAGGCGGCTAGGAAACACAAGATGCACGATCATAAGTTCACAGTGGAGGCGGTGGTGACAGAGAGCGTGAGCGTTCATTGGCAGTGCCGCGCGCTATGCACACAACCCGAGGCCGTCGCGCCGCAACAACCCAAGTACCTCGTTGAAGGCGAAGATCTGAAGAAACTCAAGTTGCTGAACGTGTTCGAGCCCTGTACGCTGCAGGTCGGCGACAGGAACTTCCTCATCATTGGGCCCGAAGACACCTTCATCACCAAGAAACAATGGAGGAGGCAACAAAGTAAATTCTATAGGAGTCTCCGAAAACAGACTAAGTCCACAAAAAAGCCGATAAAGTCTGAAACTAATTCTACGGAGCACGTGCCGTCGCGGCCCAAGAAGCGTGCTTCGTCTCGTCGCAAACTCAAGTCCATTGAACATGAAATGGAAGTGGACGCCCAAGACGTGAAATTGGAGTCCCTCGATGATGCATTACGTGCGGACGCGAAATGTCCGAGCATCAAGATCGAGCCGAGCGGCGACGTGTCTCTGCCCATAGCCAGTAGCCAGGAGGACCCCGCTACTGAGGAGAAAAATGACTCTGGTATCAGTGGGCTCAGCAAATCGCACACCCGCAGTCCCGAGCCGACGAAGGACGGCATCTTGAATGGTGACCGCCTCTCCGAGATCAACGACGATGACTCCGAGTGGGAGAACACTAGCAGCGACGGCAGTGATACTGACAGTGGTGCAACATGGTCATCACGCTGCTCATCCGCCGCTTCTGGTTCGGGACGCGGCAAGCGTTCACCACAACTGGCAGTGCGGCTTCTGCGCGGTAAACGTCTCAAACGCACCGCGCGTCGAGCGCCGCCCGCACCGCCCCCGCGTCGCGGTGAACGTGTCGTCGTTGAAACACTGCACACCACTAGTCGCGCTAACGTCGTGTGGCAGGATGGCTCCATAGAAATTGGAATACCGTCTAACCAACTGTACCCGATTCACCATCTGGACGGTCAGGAGTGTTTCCCCGGCGACTTCGTGGTCAGTGGCGCCGCTAGTGTCGACGACAATCAGCATCTAAAGCATCGCGAGTACGGCGTGGTACAACGTGTTGACCATCACGGGCGCACCGCCATCGTACACTGGTACCGGACCTACACCAGCGCCGAGGACCCCGTGCCCCAAATGTTGTATGAGAGCGAGATGAGCGTATACGACCTGAAAGACCACCCAGACTTCCAGTACCGGCCCGGCACCGTCGTCATCCGCGTCGCCAACTTCACCGGCGAAGATGCCAACTGCACCGCCGGACAGGTGATCGACAACTTCCCATCAGGTAGAGTCAAGGTGTGGTGGGTAGATGGACATACAAGCATGTGCTGGCCGCAAGATCTTTACAAGGTGGGAGAATACGACTCAGAGGACGGTGAGGTGTGGGGCTCGGAGGCGTCCGCGTCGGAGGACTCCTGGGAGACCCAAAGTTCGGCGCATGACAACGATCCTCGCACCCCGGACCACGCGCCCGACGCGCCCCTCACTCCGCTAGCACCCCCGTCTGTCATACCTTTACCTCCACCCCCGGGCCTGGTCAGCAACCCGAACGAGGAACGCGGATCGGCCGACGTGGGGACGCAGACGGCCGTCCCGCGCCTACTGGAGCCGCGCGTCGCGGCGCACATCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCCGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGGGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGTCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCCAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGAAGGTAGGCCGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGGGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCCAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCGAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCCAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGGTAGGCTGCCCTGTACCCTGTACACTGTGCTGTAGCGACACGAGTGGGAcagtgtggcgtgtggcgcacACCGAGCGCGGCCGGGTCGCCATGCGCCGCCTCCAGGAGATGTTCGCCAAGCACCCCACGCTGCAGAGCCAGGAGATAATGCGCAAGCTTCTCAATCTTTACAAAGACTGTCGGTTCCTAGATCGTTTGATGGGAACAACATTTTTCCATGAAGATCACTTTTTGGGTCTACTAGAGCGCGTTCGCGAGCGAGGCGCGAGCACTCCACGAGCCGGCGAGCGTCGCGTGCACGAACAGCTGGCGAGACTGTTCGCCGCTCGCGACCCCACCACCGACGACTCCATGGTGGACGACGCGCGACCCCTCGCGCCCACCGCCGCAATCATCGTGTCTAACGTCACCGTTGAGCCTATGGAGGTGGAAGCCAACAGTTCTAGGAAGACACTACAGTTGAACATAGAATCCGTGCAGGCTTCAGGATCTGACGCGTTTGTTGTTCATGTTGTTGGACCAAATCCGTTGGCGGGCGTGGCGGCACCGGAGGGGCAAGATGCGGACGGGACCCGTAACGTTTGCTACAAGCTCTGCTCCCTCATCCACTCGCAACTCGTCAAGGCACACGCCGAAGTCAGTCGGAGAAGGCCGCAAGTGTTGGCCGGTTTCCTTAACGAGTTAATGAAAAACCGTAACACGGACGAAGAGAAGTTACCCTACCACTTTTCAGTGCAATACGGCGCGCTGGTCGTGAGTATGGCGGACGATGAGGAGGCGGGTGACGGTAAAACCTCCGATGTTAAGGATGATCCGACCAACACTCCGCCGAAATCTGATGATGGTTGTCCAACAGAGACGGCTCCGCTCGCAACCGCGGAAGGGGAAATCGAGGGCGAAGCGCTAGGCACCAGTGAGGCTACGGACGGTGGCGAAGGGTTCTCCATACTGGAGTCCGCGCCCGCTGTGCATCGCTTCCGCCTCTCTATGCTGCAGCCTTCGGAACCTAGAACGTTCTATTCGGCTGTTAAGCGGGAGATCAAACTGCTGAAGAGCGATCTGCCGCCGGGGGTGTGGGTGCGCGGCTACGAGGACCGCATAGACTTGCTGTCGGTGATGATCGCGGGCCCGAGCCGCACGCCCTACGAGGGCGGGCTGTTCGTGTTCGACGTGCAGCTGGGCGGCGAGTACCCGCGCGCGCCCCCCCTCTGCCACTACCACTCCCACTGCACCGACCGCCTCAACCCTAACCTGTACGAGGATGGCAAGGTGTGCGTGTCCCTGCTGGGCACGTGGTCGGGGCGCGGCGTGGAGGTGTGGGGCAAGGACAGCTCGCTGCTGCAGGTCATCGTGTCCCTGCAGGGCCTCATCCTCAACGCCGAGCCCTACTTCAACGAGGCCGGCTACGAGAAGCAGAAAGGCACTCAACAAGGCAAGGAGAACTCGCGCATGTACAACGAGATGGTACTCCTGAAACTTGTGCAATCCATGACCAAGATGGTGATGAACCCGCCCGAGCCGTTCCGCGACGAGATCCTGCAGCACATGCGCTCCAACGCCGCGAGTCTCTGCCACCGCCTCGAGGAGCTCGTCGCCCTCTCCAACGGGCAATCTCTCCCCGACATCAGCCCCCCAGACTTCCCCCTCATCCCCGCCTCCAGAGGCTTCTGCCTCACGCTCCGCTCCTCCCTAGAGGCCTTCCGGAACGCACTCCGGCGCAACGACATCAACGTACCGCCCGGCACCTTATAG
- Protein Sequence
- MAGQNPGSPTDFQFFYEDEVYKINNRGQVVFGLVLENYEANSSDQESDIETPIQKGEIRVVWHPSGAERVISEKTVGLADRSLMPGDVVRRLIAGKDTQRGYCRDIEMTAALQIVGTKHVIPCVASERLQPLEDFTPDLAVCMDSWVGTSKSVHSKLRLVSADGSRLEYLDLDTCPLEDYSNRRRRSTPYTSSEYYPGQVVFGPLGSLDNANWLHMTKEMKAARKHKMHDHKFTVEAVVTESVSVHWQCRALCTQPEAVAPQQPKYLVEGEDLKKLKLLNVFEPCTLQVGDRNFLIIGPEDTFITKKQWRRQQSKFYRSLRKQTKSTKKPIKSETNSTEHVPSRPKKRASSRRKLKSIEHEMEVDAQDVKLESLDDALRADAKCPSIKIEPSGDVSLPIASSQEDPATEEKNDSGISGLSKSHTRSPEPTKDGILNGDRLSEINDDDSEWENTSSDGSDTDSGATWSSRCSSAASGSGRGKRSPQLAVRLLRGKRLKRTARRAPPAPPPRRGERVVVETLHTTSRANVVWQDGSIEIGIPSNQLYPIHHLDGQECFPGDFVVSGAASVDDNQHLKHREYGVVQRVDHHGRTAIVHWYRTYTSAEDPVPQMLYESEMSVYDLKDHPDFQYRPGTVVIRVANFTGEDANCTAGQVIDNFPSGRVKVWWVDGHTSMCWPQDLYKVGEYDSEDGEVWGSEASASEDSWETQSSAHDNDPRTPDHAPDAPLTPLAPPSVIPLPPPPGLVSNPNEERGSADVGTQTAVPRLLEPRVAAHIERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGRPVPCTLCCSDTGGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFVKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLQEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQKVGRPVPCTLCCSDTGGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLQEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLEEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLQEMFAKHPTLQSQEVGCPVPCTLCCSDTSGTVWRVAHTERGRVAMRRLQEMFAKHPTLQSQEIMRKLLNLYKDCRFLDRLMGTTFFHEDHFLGLLERVRERGASTPRAGERRVHEQLARLFAARDPTTDDSMVDDARPLAPTAAIIVSNVTVEPMEVEANSSRKTLQLNIESVQASGSDAFVVHVVGPNPLAGVAAPEGQDADGTRNVCYKLCSLIHSQLVKAHAEVSRRRPQVLAGFLNELMKNRNTDEEKLPYHFSVQYGALVVSMADDEEAGDGKTSDVKDDPTNTPPKSDDGCPTETAPLATAEGEIEGEALGTSEATDGGEGFSILESAPAVHRFRLSMLQPSEPRTFYSAVKREIKLLKSDLPPGVWVRGYEDRIDLLSVMIAGPSRTPYEGGLFVFDVQLGGEYPRAPPLCHYHSHCTDRLNPNLYEDGKVCVSLLGTWSGRGVEVWGKDSSLLQVIVSLQGLILNAEPYFNEAGYEKQKGTQQGKENSRMYNEMVLLKLVQSMTKMVMNPPEPFRDEILQHMRSNAASLCHRLEELVALSNGQSLPDISPPDFPLIPASRGFCLTLRSSLEAFRNALRRNDINVPPGTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -