Meup008900.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- pnr
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000001.1:110739118-110755375[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1 2.4e+04 -3.1 0.2 3 9 3 9 2 10 0.85 2 4 5.9 4.7e+04 -4.0 0.3 8 18 76 86 75 86 0.75 3 4 4.3e-18 3.4e-14 54.1 3.2 1 34 167 199 167 201 0.97 4 4 1.5e-18 1.2e-14 55.5 5.7 1 35 226 259 226 260 0.98
Sequence Information
- Coding Sequence
- ATGTTCCAATGTTCGTCGACGAGCACAATCGGCGCCAACGCAGGTGTTGTCTCCAGTGACACGCAAAACGGTTACCGCGGTCATTACCATCACGATCGAATAGTGTACGTGCCGTCGTCCAAGCCAAATATGTTCGGTCTTGCGCACCACCAGTACGGCGCACCACCGCCGCCACCACTTCCACCGCCCACTCCGTCCACAGTCGGCACCGCAGTACAGGGCGCCACCACTCACACGTGGCAGAACACGCCGGCCGGGGTACAGAGCAGCAGTCACCTCGTCTCCTCGGCCGCCGGTTCGCCGGCCAACAACAACGGTGGCCACTCGAACGTTGTCCCGGTGCAGTCGTCACCGTCGTCGGCCACCCCGCCGTTCTATCAGagtgccgccgccgccgcagccgcCGCGGCCATCATGTGGCCAAACCCCACGGCCGCCGCATTCCAGGCTCATCACTACGACGCCGGAATGGATTTGCAGTTCGGAGATGGCCGGGAGTGTGTCAACTGCGGTGCGATCTCCACGCCGCTGTGGCGCCGCGATGGCACCGGACACTATCTGTGCAACGCATGCGGGCTGTACCACAAAATGAACGGCATGAACAGACCGCTTGTCAAGCCGGCCAAGAGATTGGTAGCCTTCGAGACCGCATCCAACAGACGCCTCGGTCTGTCATGTACGAACTGCGGCACCCGAATGACCACCTTGTGGAGGAGAAACAACGACGGCGAGCCCGTGTGCAACGCGTGCGGTCTGTACTACAAACTGCATGGCGTCAACAGACCGCTGACGATGAGAAAGGACGGTATCCAGACAAGGAAGAGGAAACCTAAGAAGCAgccttcgtcgtcgtcgtcctctTCTTCTAACGGTTCGTCAAATGTAGAGAACCATAGACAATCCACTTCCGCGGCCATAGATCTATTAGtgaaCAAGCATCACGCAACGGTGGAAATCAAACACGAACACACTTACGATCCAGCGGCGGCTGCGGCTGCCGCTGCGGTGGCGGCGGAACACTTCCTCTTTCCCGGCACAGCGGGCGGCCATCATCATCCCCAGCTGGGCGGGTTCAGTTTTCCGATCCCTCAGGCTCCGGTGCCTGCACACAACTATCAACACCTGTTGAACGGACACGTCAACAACAAACTGATGGCGTCCTAG
- Protein Sequence
- MFQCSSTSTIGANAGVVSSDTQNGYRGHYHHDRIVYVPSSKPNMFGLAHHQYGAPPPPPLPPPTPSTVGTAVQGATTHTWQNTPAGVQSSSHLVSSAAGSPANNNGGHSNVVPVQSSPSSATPPFYQSAAAAAAAAAIMWPNPTAAAFQAHHYDAGMDLQFGDGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVAFETASNRRLGLSCTNCGTRMTTLWRRNNDGEPVCNACGLYYKLHGVNRPLTMRKDGIQTRKRKPKKQPSSSSSSSSNGSSNVENHRQSTSAAIDLLVNKHHATVEIKHEHTYDPAAAAAAAAVAAEHFLFPGTAGGHHHPQLGGFSFPIPQAPVPAHNYQHLLNGHVNNKLMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134973;
- 90% Identity
- iTF_01305209;
- 80% Identity
- -