Basic Information

Insect: Macrosiphum euphorbiae
Gene Symbol: -
Assembly: GCA_949089665.1
Location: CARXXK010000001.1:116234972-116238088[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.2 1.2e+03 2.2 0.7 2 10 127 135 126 137 0.91

2 17 0.09 12 8.5 0.1 2 23 150 169 149 169 0.85

3 17 0.0034 0.44 13.0 0.2 1 23 181 204 181 204 0.98

4 17 0.63 83 5.8 0.5 1 20 249 268 249 270 0.94

5 17 8.1 1.1e+03 2.4 1.6 3 17 277 291 276 297 0.76

6 17 0.31 41 6.8 0.6 2 23 308 330 307 330 0.94

7 17 3.2e-05 0.0042 19.3 0.4 2 23 337 358 337 358 0.97

8 17 0.0049 0.64 12.5 0.5 1 23 364 386 364 386 0.95

9 17 0.00016 0.022 17.1 2.3 1 23 392 414 392 414 0.99

10 17 0.46 60 6.3 0.2 1 23 425 448 425 448 0.91

11 17 0.24 32 7.1 0.7 2 23 467 489 466 489 0.92

12 17 0.011 1.4 11.4 1.5 1 23 500 522 500 522 0.97

13 17 0.061 8 9.0 3.1 1 23 595 618 595 618 0.97

14 17 0.081 11 8.7 0.7 1 23 630 653 630 653 0.94

15 17 2.3e-05 0.0031 19.8 2.5 1 23 663 685 663 685 0.96

16 17 0.38 50 6.5 0.0 2 23 761 782 760 782 0.95

17 17 0.02 2.7 10.5 0.1 2 23 795 816 794 816 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.2	1.2e+03	2.2	0.7	2	10	127	135	126	137	0.91
2	17	0.09	12	8.5	0.1	2	23	150	169	149	169	0.85
3	17	0.0034	0.44	13.0	0.2	1	23	181	204	181	204	0.98
4	17	0.63	83	5.8	0.5	1	20	249	268	249	270	0.94
5	17	8.1	1.1e+03	2.4	1.6	3	17	277	291	276	297	0.76
6	17	0.31	41	6.8	0.6	2	23	308	330	307	330	0.94
7	17	3.2e-05	0.0042	19.3	0.4	2	23	337	358	337	358	0.97
8	17	0.0049	0.64	12.5	0.5	1	23	364	386	364	386	0.95
9	17	0.00016	0.022	17.1	2.3	1	23	392	414	392	414	0.99
10	17	0.46	60	6.3	0.2	1	23	425	448	425	448	0.91
11	17	0.24	32	7.1	0.7	2	23	467	489	466	489	0.92
12	17	0.011	1.4	11.4	1.5	1	23	500	522	500	522	0.97
13	17	0.061	8	9.0	3.1	1	23	595	618	595	618	0.97
14	17	0.081	11	8.7	0.7	1	23	630	653	630	653	0.94
15	17	2.3e-05	0.0031	19.8	2.5	1	23	663	685	663	685	0.96
16	17	0.38	50	6.5	0.0	2	23	761	782	760	782	0.95
17	17	0.02	2.7	10.5	0.1	2	23	795	816	794	816	0.93

Sequence Information

Coding Sequence: ATGCCGGACAACGTGGGACCTCCGAAATCCTGTCCCGGAAAGATAGATTTTCGGAAACCTCGGAGACGTAGGCACTATGCCACATTGCGTCGTCATCGGACGTCGTTCGACCTGACGAATCAAGTGATCGTTTACTTCGACCCCGACGGCAGCGGGAGATGTGAAGTGGTTGGAGGTGGTGGCACTACTGCAGGCTACGGCGGCGGTGGCGACCAGCAGTCCTCGGAGGTACAAAAGTCTGTGGACGCGAACCGCAAGGGCCGGCCCAAAGGATCGAAGAACAAGTCCCCGACATCGTCTTCGTCGCCGTCACTATCCGGCTCGTTCAACTACCGCTCCAAGAAAAAGTCACTGACGTACACGTTCGCTGGCCCGGTCAAGTGCAAATCATGCGATCGCACGTTCGACGGCGACCCTGTGGCCCACTGTCTGGAGCATCACAGGTCCGTGTGTCCTATTTGCGGCCGCACGTACCGGCCACCGTTGAACACGCACATCAAATCGCACGGGACCCGACACGTTTTGCTGACCGTTTCGTGTTACGAGTGTTACGTGTGCAAGGAGAAGTTCGGAAACGCGCAGACCATGGCCGAACACTTGCGGACCGAACACCAAGATGTCACCGCCGCTGGCGAGTGTTCGCTGTGTGGCGAAACCACCACCGCGTTCGTGACCGTCGAAGCAGCCATCGACCACCTAGTGGACGCGCACTGTCCGCGCAAGAAGTTTAGCCACCCAACCGTGTATCGGTGTCGGGTGTGTCTGGCCGGGTTCAAGAGCCAGATCAACGTGCTGCGGCACGCGTGCAACAAGATCAAGTCACCGCATTGCGCACAGTGTGAAAAGACGTTCCCGTCCAAGATGCGGTACGCGTTCCACCTGCAGTTCCACGAGCACCCAAAGTGGGCGACCATGCACTTGCACTGCGACCTATGCCTGGCCGAGTTCGACGACGAGTACCAGCTGTACGATCACATCCGGTTCCGACACGAGCTGCACGACAAGGCGGTGTGCGAGGTGTGTGGCCGGACGTTCAAGTCGTCAATGGGCCTAAACATCCACCGCCGGTATCACAACGGGTCCCGGGACTTTGCGTGCGGATCGTGCGACAAGTCGTTCCTGAACAAATCCACGCTTAGGGAGCACGAGATCTCGCACATGGACGTCAAGCCGTTCCAATGTCACATATGCGGCCAGTACCTGAGTCGCGCGTCCAGGCTCCGGTCACACGTCAAGACTCACCGAGCCGCCGAGTCGACCGACCAGCTGTGCTACTGCTGCAGCCAGTGTGGTTACGTGGCACCTAACCCGACCGCGGTCACCGAACACGTCGGCAAGCAGCACTGCGATGAAACTGTAAATAACGAATGTTACGCACTACAACTGTCGTCGGTGGTCAAGTGCGAGTACTGTGACTCGACGTACCTAAACTCGGTACACCTGAACAGCCACCGAGAAGCGGAGCACGTGGGTGGAGGGGCAGGCAACGCCGAACCATTCATCTGCGTGGTGTGTTCGTCCACGTTCAGTACGTACTCCAGGTTGACCACGCACAAGCTAACGCATGGAATCAATATGGAGTCCACCTGTGGCGTGCCCGTTCAGCAGCAGCAAACTGAACAGGACGATCTCAATCAGCCTGCAGACTTCCTGGACGACTCGGTGTCGGATAAGTTTGAAATCCCACAGTTTTTCTCCTGCGAGTACTGCTCCAAGATGTGCTTGCACTACACGTACTTTTGCCTACACCGGCGACTCAAACATCCACCCGGAGTGCAGACGCACACGTGCGAAAAGTGCTCAGTGGACTTTAAAACGTCCTGGAGACTGTCGTACCACAGAAAAACCGTACACGGACAACAGACAGACGAAAAGCCGGCTGAGAAGTTCAACTGTACCGTATGCTCTCGGCAGTTCGTCAAGATCGGCGCCCTCAACTTGCACAAGACCCGCACGCACATCGACGTGGTCGGCGACGTGTGCAAGTACCTGTGCCATCTGTGTGGCAAGTTTTTCAGCTCAGAGTTTTCGCTCAGGGCGCACGTCAAGACGCACGAATTCAGCGTTGGCGGTGTGCCCGCACCAGTACAGATGCCACTACTCGGCGGCTGCATCGGCAACGACGATCGCTCTCTCGTCGACAACCACAGCTACTGCTCCGAACCCTCCTCGATGGCACCGCCGCAGACGGTACATATCTGGCCGAATCACCGGCGCCGCACTTACCGGAAACCGATCTCCACCTCCTCTGCCGCCTGTTTGACGTCGCCGGTCAAGAAATCGTGTCCGTACTGCACTCTGACGACCGATGACGAGGCGGCGTTCATCGAGCACGTCAACGGTCATATCGGGTACTGCAATCCCGTATTGCCGGCGGGCACCGTTTGTGAGCTGTGCGAAGCGAGTTTCGGTGACTCTAAGCAACTCAAGTACCACCTAGACGACCACGTGAAAGCGAACCAAGCTCTCCTGTGCCAGGCGTGCTACTCGCCGTTCCTGTCGTCGGCCGCGCGCGCCGTCCACGTTGCCAAGGAATGTCCGTCCACGACGATGCTGGTCGACTACACATCTACCGGTACTGCCGTCCCTCCACGAGTAGAGTCCATAGGCCCGTCCACCCCACCTGAAGTCAAGTCTGTCAGCCCATTCACCCTACCCGAAGTCAAGTCTGTCAGCCCATCAACCCAACCACCCGATGTCAAGTTTGTCAGCCTCCCCGTCTCTACGCCCGATGTCAAATTTGTCGGCCTCCCCGTCTCTACGCCCGATGTCAAATTTGTCGGCCTCCCCGTCTCTACGCCCGATGTCAAGTTTGTCGGCCTGTCCGACACCCCGCAGTCCGACGCCCGTCCTGCACTGATCGTCGACTGTTCGGAGATATTCAGTGACTGCAAGGGCATAACCGACGATAGATCATCGTCCCGGAAATCGGACGAATTTCCGGTCGAGCCAAACGCCGACGACAAAGGATCACTGGAATTTTCCGTGCTCGACGAGCTCTTGTCCATCATGTCCACGCCGCGCACGTTGGTCGCCCTGGATTCGATCGACTACCAACCACCGGACGACATGTCGTTGGACGCGATTTTCGACAGCATCTCCACTGCCGTAGACTGA
Protein Sequence: MPDNVGPPKSCPGKIDFRKPRRRRHYATLRRHRTSFDLTNQVIVYFDPDGSGRCEVVGGGGTTAGYGGGGDQQSSEVQKSVDANRKGRPKGSKNKSPTSSSSPSLSGSFNYRSKKKSLTYTFAGPVKCKSCDRTFDGDPVAHCLEHHRSVCPICGRTYRPPLNTHIKSHGTRHVLLTVSCYECYVCKEKFGNAQTMAEHLRTEHQDVTAAGECSLCGETTTAFVTVEAAIDHLVDAHCPRKKFSHPTVYRCRVCLAGFKSQINVLRHACNKIKSPHCAQCEKTFPSKMRYAFHLQFHEHPKWATMHLHCDLCLAEFDDEYQLYDHIRFRHELHDKAVCEVCGRTFKSSMGLNIHRRYHNGSRDFACGSCDKSFLNKSTLREHEISHMDVKPFQCHICGQYLSRASRLRSHVKTHRAAESTDQLCYCCSQCGYVAPNPTAVTEHVGKQHCDETVNNECYALQLSSVVKCEYCDSTYLNSVHLNSHREAEHVGGGAGNAEPFICVVCSSTFSTYSRLTTHKLTHGINMESTCGVPVQQQQTEQDDLNQPADFLDDSVSDKFEIPQFFSCEYCSKMCLHYTYFCLHRRLKHPPGVQTHTCEKCSVDFKTSWRLSYHRKTVHGQQTDEKPAEKFNCTVCSRQFVKIGALNLHKTRTHIDVVGDVCKYLCHLCGKFFSSEFSLRAHVKTHEFSVGGVPAPVQMPLLGGCIGNDDRSLVDNHSYCSEPSSMAPPQTVHIWPNHRRRTYRKPISTSSAACLTSPVKKSCPYCTLTTDDEAAFIEHVNGHIGYCNPVLPAGTVCELCEASFGDSKQLKYHLDDHVKANQALLCQACYSPFLSSAARAVHVAKECPSTTMLVDYTSTGTAVPPRVESIGPSTPPEVKSVSPFTLPEVKSVSPSTQPPDVKFVSLPVSTPDVKFVGLPVSTPDVKFVGLPVSTPDVKFVGLSDTPQSDARPALIVDCSEIFSDCKGITDDRSSSRKSDEFPVEPNADDKGSLEFSVLDELLSIMSTPRTLVALDSIDYQPPDDMSLDAIFDSISTAVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01038699;
90% Identity: -
80% Identity: -