Meup019707.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000002.1:33464574-33466358[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-11 3.9e-08 34.8 0.0 3 37 20 54 19 60 0.91
Sequence Information
- Coding Sequence
- ATGCCGAACTATTATAAAAGAATACCTGGCAGTCGTACATACCGAAATTTTGCTGCAGAAACTTTGGAAAATGCACTAAAGGAAATCCGAAATAAAAGTTTGAGTTACCGAAAGGCTTCAGATAAGTATGGTATACCGATAAGTACTTTAAGTAGGAAAAAAAACAACCTAAATGTTAAACCCCACGGAGGCCAAACCGCTTTAACTTCTACTgaagaaaatgttattgtagaaacaatattatttgcatcTGATTGGGGTTATCCTTTTGAAAGGGAGGACGTTAAAACATTGGTAAAGTCTTACTTAGATCGTGCTGGGCGAAAATTGAAGATATTTCAAGATAATAAACCTGGCGATGAGTGGTACTCACGTTTTTTAGACAGATATTCTGATGTTTTGAAACCTAGACTATCTGAGAATATCAAAAGATCACGAGCTGCTGTCTCAAGAACTATCatcaatgaatattttaataatcttgAATTAAGTTTAGAAAATGTACCACCGGAAAACATTATCAATTATGATGAGACAAATTTTATAGATGATCCGGGTAGAACAAAAGTTTTAGTGaggaaaaaaaccaaacatGCTGATTCAGTAATGGATTCAACAAAGTCTGCTACATCGGTTATGTTTGCTGTTGATGCATCTGGTGTTATGCTTCCTCCATATGTTGTTTACAAATCCCTCCAGATGTGGGAACCTTGGACGTTAGGAGGGCCAAAAGGATGTAGATACAACAGATCACACTCTGGGTGGTTTGATCAATCAATATTTGAAGAATGGTTTCAAACCATAATCATTCCACATTGCCGTCGTTTGGTAggtataaaagttattattggTGACAACTTGGCTAGCCATATTTCAGTCAATATTGTTAAGCTCTGTAAACaacatgatattaaatttatatttctgcCACCCAACAGCACACACCTGACTCAACCATTGGATGTGTGTTGTTTTCGTCCCATGAAAATAGCATGGCGTAGGGTATTAAAGatgcataaattaaaaaaaaaaggaccaCTTACTAAAGATGTGTTTCCGAAAATTCTAAAAGCAACAttagataaacttaaaatttctcaatctgataatataaaatctgGGTTTAAAGCTACTGGCATATACCCGATAGACCGAGATAAAGTGTTGATTAAATTACCCGGGGATCCAGACTCGTCCTCAGCCTCTTCTATTATCCCACAAGTATTGCATGATTTGTTTAAGGAAACTAGATTTGGTTCTAACGATGGACCAGCAAAGAAATGCAAAAGAAAAAGATTTAATATAGAGCCGGGCCGGAGTGTAACTGAAGCTAATATGTTTCATGAAGGAGAAGACCTTGGACTTGACACAGAGCTTAATAATGAAGAAGAATTAAACCCAAATACTGAACTTAACCCTAATGAGACTGAACTAAATACAATTAGTGAAAAAAACTATGAGACTGAAGAAAATTATGAGACTGAAGGAAATTATGAGACTGAAGAAAACGGTGAgactgtaattattaatattaataacctaaAAGTAGATGATTTTGTTAAGGTAAAATTTGAAACTATAAGAAGCAACTTTGAAGAATACATGGGCCAAATTACTGAAATAGAGGAAGAGAACATACTATGCCGGTTCCTAAGAAAGAGCCAAAGTATGAGAGGATGTTATTCTTTTCCATTCATTATAGATGAAGCATATGTTACTTTAGatcaagttgtaaaaaaattaaaggttcTAACAGAGAGAagaggtaattttaaatttgaataa
- Protein Sequence
- MPNYYKRIPGSRTYRNFAAETLENALKEIRNKSLSYRKASDKYGIPISTLSRKKNNLNVKPHGGQTALTSTEENVIVETILFASDWGYPFEREDVKTLVKSYLDRAGRKLKIFQDNKPGDEWYSRFLDRYSDVLKPRLSENIKRSRAAVSRTIINEYFNNLELSLENVPPENIINYDETNFIDDPGRTKVLVRKKTKHADSVMDSTKSATSVMFAVDASGVMLPPYVVYKSLQMWEPWTLGGPKGCRYNRSHSGWFDQSIFEEWFQTIIIPHCRRLVGIKVIIGDNLASHISVNIVKLCKQHDIKFIFLPPNSTHLTQPLDVCCFRPMKIAWRRVLKMHKLKKKGPLTKDVFPKILKATLDKLKISQSDNIKSGFKATGIYPIDRDKVLIKLPGDPDSSSASSIIPQVLHDLFKETRFGSNDGPAKKCKRKRFNIEPGRSVTEANMFHEGEDLGLDTELNNEEELNPNTELNPNETELNTISEKNYETEENYETEGNYETEENGETVIININNLKVDDFVKVKFETIRSNFEEYMGQITEIEEENILCRFLRKSQSMRGCYSFPFIIDEAYVTLDQVVKKLKVLTERRGNFKFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940330; iTF_00940335; iTF_00940370; iTF_01305473; iTF_01305472;
- 90% Identity
- iTF_00940330; iTF_00940370; iTF_00940335;
- 80% Identity
- iTF_00940330;