Meup060367.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010001661.1:74569-78779[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-08 1.3e-05 26.7 0.0 15 42 11 39 1 42 0.86 2 2 0.043 20 6.9 0.0 4 38 55 89 53 92 0.93
Sequence Information
- Coding Sequence
- ATGGAGAATGCTTTAAGTGAGCTGAAGTTCGGGACGATGTCCATTAGCCAGGCTGCCCGTCACTATATGGTCCCGGAGACAACACTCCGGGAGTATGCCAAGAAACGAAACATATGTGTAAAAACTGCAAAACGGTCTTACAATAAAACAAGTGAGAATATTGCTCTAAAGGAGGCCATCTTGCTTGTGCAACAAGGGATGCCAATAAATTTGGCAAGCCGCATCAAGAATGTCAAAAAAACGACATTAAGTGTTGCATTTAAGAAAATGTCAAAAGCGCCTGCTATTACTCAGCAAGCGCCCGCTGTTGAGGAGCAAGCGCCCGCTATTACTCAGCAAGCGCCCGCCGTTGAGGAGCAAGCGCACGCTATTACTCAGCAAGCGCACGCTATTACTCAGCAAGCGCCCGCCGTTGAAGAGCAAGCGCCCGCCGTTGAGGAGCAAGCGCCCGCCGTTGAGGAACAAGCGCCCGCTATTACTCAGCAAGCGCCCGCTGTTGAGGAGCAAGCGCCCGCTATTACTCAGCAAGCGCCTGCCGTTGAGGAGCAAGCGCACGCTATTACTCAGCAAGCGCCCGCCGTTGAAGAGCAAGCGTCCGCCGTTGAGGAGCAAGCGCCTCAACGACCGAAGACAGCCATAAAACGTATCGTAAAGTTTAAAGGGGATAAAATCGAGGAAGTGAAAAAAGTGTTTGAAGTACACAGCCGTATGGCGTACTACCCGAAGCCagttaaatATGTTATGAAGCGGTTAGATTTAACTGAAGACCCTGCGCACGAGGAAATCCAGGGAGACCGAGTGGTTGTCGTGAAGAGAAACAGCCACGTCCGTTTTAGTGAGGATGGCTCAGTGGTTCCAGCAATTGACTCTCCATTTACTGACGATGATGGTTTTGAAATCGCTGATCTAAATAGGCTTAATATTTACACCCCATCACCATCAACAACGCCATCACATCCATACGATTTCTTCGAGGAAGAACTATCGGAAATTGGAGAATATAAGCCAAAAAAACCAATCGCCGACGTCGACCGTGAGTCCCCGGAGTCCCCAAAAGCGGGCCCCTCAGGTTCATGTGGATATCCGCCGGCCGAACTTCGAAATACCAGACAGTCCCCGCTGATAACTTTTAAAAGCGTTCAATGCGATTCCGGAgaagCTCTGATGGTTGCCTCTGAAAATGAATCGTCGATCGTCGACACACCCAGCCCATTAAACGTAGATGATTGGAACTCAGAAGATCGTCCAGTTAAAATTGATTCGAACTTCGATCACCGTGTCGACTCTCTGATTACTAATCGCCTTCTAAAGTACTGTCCAATATGCAAATATAAGACCCAAGACAACAAGATGACTAGGCACATCGCGTTGAAACACGCGTCCTTGTTGCGAACCCCGGTTACAAAAAGCCTAGCGGCCATTGGACGGATCTACGGATCACATTCCCGACGATCCATTTCGTTGGTTCCAATGGTCGCCATGAAGACAGTCATCGGCCCATATTGGGACGATGTGCCGTTAAGACGGATAGCCTTCAGaatcgCCATAATGGGCAGGCTTCAAGTATATGGAGGGTCGTGGGACCTCCCCGAGTCCCCCCACGTTGTACCGAGTCCGTTTGCGCAATGGTTTAAAGTGGAAGAAATCTTGCACCAGCCGACCGTCACTCCAAGAATGGACCATCTCAAGAGAAGAACCGGTATTCCAGATGTTTCGGACGACATTCCCGTGTCTCCTTCTAGTCAGAAGTTTAGGAAGACACTTCAGGAAAGCGGCTACCAAGAGCAGCTTCCTACCGACCATCCGCTATTAAAGTTGTATCGGCGATCGCTGAGCCTGAGCCACGGGGACGAGTCGTCTGCGGCGAAAAACTATACCGCGAATGTGGCAAAAATGTTGTACTTCGTCGACGCGTGGTTGAAGGACCGGAAAACGCCGGCCAAGCACTGGTCGCAGTTGTTGGGCACCAGCGAAGAGCCCTTCCACGAATACCTCAGCAAgaGAGAAGAACTCGGGCAAACAATTGCTACGTCAATCAACTACCTCAAAAACCTGAACGCGTTGTACGAGCTGGCCCTGTCGTGCTATTGCCTCGAAGACCCCTCGTTCCCGCAATCATTCGATTCGACTCCATGCCCTTCCCGGATCAACGACATAAAAGTCGTTAAACAAAAGCTTAAACTCATTTACAAAAACAAGATTAAGAACCAGCCGCAAGAGCTTTTCAACAGAAAAACGGAGGAAGCCAGGACGGTCCCGGAGTACCTCGAggtctacaaaataataaagcgTATCTCCGAAAGCATACCGAAAACATTGACACAGCTAGAGGAACATGTCGGGGAGGAAGGTCCGGTAGACGTATCGACGTACAGGGACTCGGCGCCGATACAGAAACACCTGAGCACATTGTGGAGAAGCGTCTCTTGCGGCTTGGCTCTTACGTGCCTATGGATTTCAAAACACCGGTCTGGTGTCGTCACGAACTGCACGGTAGCCGAATTCGAAAACCGTAAAAAGGAAgggtctaaaattataattacggTGTCGAAACACAAGACCGGGGACAAGGAGCCGGCCATGATGGTCTTTGACCAGGACGATACGGCGGCCCACCTGGAgagatactATAAGCTGCGCACGCGGGTGAGGACGTCGGTGAAAGAGCTCTTCATCACAAGCCGCGGGAAAAGACTCACCAAATTGTATGAAGAGATAAACAGGATCTACAAATGCCAACTGTCGGCCAACATCTTCCGACGAATGGTTGAAACGCAATCCAGGGCCCTCGGCAAAGAGACTATGAGTGGCATAGCGACGGCCCTGCAACACTCGGAAAGCACAGCGTTGAGGTATTACCAGCTGCCAGATTCGAACGAGGCACTGAGGCGGCAAACGACCATAGACACGGTTGACGCGACAGCCGTGTTCGAGAGTCTGGTCGAGGACGAatTTCCGGAAGTATTTAATCCGTCACCATACATTGACGTGAGCAACGGGGACACGGTCAGGAAGAACCTGGAAAAAACAGAGGCCTTCCGAAGCAACCCGTTGGCCAGCGTATCTGACCAAATTATCATTCGGTATCAACTTTGGTTCACCGAATATATGATGGATGAACGTGTTGACGTGACCGTCGGTCTGCTTAAAGGCAAATCCATGCGAGACGTGACGAAAGTGTTGAAGTCAGAAGGGCTGAGCTTTTTTTTGAGGATGAACTCTAAAGAGTTTTTGACGAAAGTCGAAAAAAAGCTGAGCCGTAGTCCTCCAGCACAATAA
- Protein Sequence
- MENALSELKFGTMSISQAARHYMVPETTLREYAKKRNICVKTAKRSYNKTSENIALKEAILLVQQGMPINLASRIKNVKKTTLSVAFKKMSKAPAITQQAPAVEEQAPAITQQAPAVEEQAHAITQQAHAITQQAPAVEEQAPAVEEQAPAVEEQAPAITQQAPAVEEQAPAITQQAPAVEEQAHAITQQAPAVEEQASAVEEQAPQRPKTAIKRIVKFKGDKIEEVKKVFEVHSRMAYYPKPVKYVMKRLDLTEDPAHEEIQGDRVVVVKRNSHVRFSEDGSVVPAIDSPFTDDDGFEIADLNRLNIYTPSPSTTPSHPYDFFEEELSEIGEYKPKKPIADVDRESPESPKAGPSGSCGYPPAELRNTRQSPLITFKSVQCDSGEALMVASENESSIVDTPSPLNVDDWNSEDRPVKIDSNFDHRVDSLITNRLLKYCPICKYKTQDNKMTRHIALKHASLLRTPVTKSLAAIGRIYGSHSRRSISLVPMVAMKTVIGPYWDDVPLRRIAFRIAIMGRLQVYGGSWDLPESPHVVPSPFAQWFKVEEILHQPTVTPRMDHLKRRTGIPDVSDDIPVSPSSQKFRKTLQESGYQEQLPTDHPLLKLYRRSLSLSHGDESSAAKNYTANVAKMLYFVDAWLKDRKTPAKHWSQLLGTSEEPFHEYLSKREELGQTIATSINYLKNLNALYELALSCYCLEDPSFPQSFDSTPCPSRINDIKVVKQKLKLIYKNKIKNQPQELFNRKTEEARTVPEYLEVYKIIKRISESIPKTLTQLEEHVGEEGPVDVSTYRDSAPIQKHLSTLWRSVSCGLALTCLWISKHRSGVVTNCTVAEFENRKKEGSKIIITVSKHKTGDKEPAMMVFDQDDTAAHLERYYKLRTRVRTSVKELFITSRGKRLTKLYEEINRIYKCQLSANIFRRMVETQSRALGKETMSGIATALQHSESTALRYYQLPDSNEALRRQTTIDTVDATAVFESLVEDEFPEVFNPSPYIDVSNGDTVRKNLEKTEAFRSNPLASVSDQIIIRYQLWFTEYMMDERVDVTVGLLKGKSMRDVTKVLKSEGLSFFLRMNSKEFLTKVEKKLSRSPPAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940303;
- 90% Identity
- iTF_00940327;
- 80% Identity
- iTF_00940327;