Meup044521.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000339.1:57873-61884[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-08 7.8e-06 27.4 0.0 8 42 4 39 1 42 0.82 2 2 0.0019 0.92 11.2 0.0 4 38 55 89 53 92 0.93
Sequence Information
- Coding Sequence
- ATGGAGAATGCTTTAAATGAGCTGAAGTTCGGGACGATGTCCATTAGCCAGGCTGCCCGTCACTATATGGTCCCGGAGACAACACTCCGGGAGTATGCCAAGAAACGAAACATATGTGTAAAAACTGCAAAACGGTCTTACAATAAAACAAGTGAGAATATTGCTCTAAAGGAGGCCATCTTGCTTGTGCAACAAGGGATGCCAATAAATTTGGCAAGCCGCATCAAGAAGGTCCCAAAAACGACATTAAGTGTTGCATTTAAGAAAATGTCAAAAGCGCCTGCTATTACTCAGCAAGCGCCCGCTGTTGAGGAGCAAGCGCCCGCTGTTGAGGAGCAAGCGCCCGCTATTACTCAGCAAGCGCCTGCCGTTGAGGAGCAAGCGCACGCTATTACTCAGCAAGCGCCCGCCGTTGAAGAGCAAGCGCCTCAACGACCGAAGACGGCCATAAAACGTATCGTAAAGTTTAAAGGGGATAAAATCGAGGAAGTGAAAAAAGTGTTTGAAGTACACAGCCGTATGGCGTACTACCCGAAGCCagttaaatATGTTATGAAGCGGTTAGATTTAACTGAAGACCCTGCGCACGAGGAAATCCAGGGAGACCGAGTGGTTGTCGTGAAGAGAAACAGCCACGTCCGTTTTAGTGAGGATGGCTCAGTGGTTCCAGCAATTGACTCTCCATTTACTGACGATGATGGTTTTGAAATCGCTGATCTAAATAGGCTTAATATTTACACCCCATCACCATCAACAACGCCATCACATCCATACGATTTCTTCGAGGAAGAACTATCGGAAATTGGAGAATATAAGCCAAAAAAACCAATCGCCGACGTCGACCGTGAGTCCCCGGAGTCCCCAAAAGCGGGCCCCTCAGGTTCATGTGGATATCCGCCGGCCGAACTTCGAAATACCAGACAGTCCCCGCTGATAACTTTTAAAAGCGTTCAATGCGATTCCGGAgaagCTCTGATGGTTGCCTCTGATAATGAAACGTCGATCGTCGACACACCCAGCCCATTAAACGTAGATGATTGGAACTCAGAAGATCGTCCAGTTAAAATTGATTCGAACTTCGATCACCGTGTCGACTCTCTGATTACTAATCGCCTTCTAAAGTACTGTCCAATATGCAAATATAAGACCCAAGACAACAAGATGACTAGGCACATCGCGTTGAAACACGCGTCCTTGTTGCGAACCCCGGTTACAAAAAGCCTAGCGGCCATTGGACGGATCTACGGATCACATTCCCGACGATCCATTTCGTTGGTTCCAATGGTCGCCATGAAGACAGTCATCGGCCCATTGGGACGATGTGCCGTTAAGACGGATAGCCTTCAGaatcgCCATAATGGGCAGGCTTCAAGTATATGGAGGGTCGTGGGACCTCCCCGAGTCCCCCCACGTTGTACCGAGTCCGTTTGCGCAATGGTTAAATCTTGCACCAGCCGACCGTCACTCCAAGAATGGACCATCTCAAGAGAAGAACCGGTATTCCAGATGTTTCGGACGACATTCCCGTGTCTCCGTgaTTCTAGTCAGAAGTTTAGGAAGACACTTCAGGAAAGCGGCTACCAAGAGCAGCTTCCTACCGACCATCCGCTATTAAAGTTGTATCGGCGATCGCTGAGCCTGAGCCACGGGGACGAGTCGTCTGCGGCGAAAAACTATACCGCGAATGTGGCAAAAATGTTGTACTTCGTCGACGCGTGGTTGAAGGACCGGAAAACGCCGGCCAAGCACTGGTCGCAGTTGTTGGGCACCAGCGAAGAGCCCTTCCGCGAATACCTCAGCAAgaGAGAAGAACTCGGGCAAACAATTGCTACGTCAATCAACTACCTCAAAAACCTGAACGCGTTGTACGAGCTGGCCCTGTCGTGCTATTGCCTCGAAGACCCCTCGTTCCCGCAATCATTCGATTCGACTCCATGCCCTTCCCGGATCAACGCCATAAAAGTCGTTAAACAAAAGCTTAAACTCATTTACAAAAACAAGATTAAGAACCAGCCGCAAGAGCTTTTCAACAGAAAAACGGAGGAAGCCAGGACGGTCCCGGAGTACCTCGAGGTCTACCAAATAATAAAGCGTATCTCCGAAAGCATACCGAAAACATTGACACAGCTAGAGGAACATGTCGGGGAGGAAGGTCCGGTAGACGTATCGACGTACAGGGACTCTGCGCCGATACAGAAACACCTGAGCACATTGTGGAGAAGCGTCTCTTGCGGCTTGGCTCTTACGTGCCTATGGATTTCAAAACACCGGTCTGGTGTCGTCACGAACTGCACGGTAGCCGAATTCGAAAACCGTAAAAAGGAAgggtctaaaattataattacggTGTCGAAACACAAGACCGGGGACAAGGAGCCGGCCATGATGGTCTTTGACCAGGACGATACGGCGGCCCACCTGGAgagatactATAAGCTGCGCACGCGGGTGAGGACGTCGGTGAAAGAGCATGATGAAGACATCACAAGCCGCGGGAAAAGACTCACCAAATTGTATGAAGAGATAAACAGGATCTACAAATGCCAACTGTCGGCCAACATCTTCCGACGAATGGTTGAAACGCAATCCAGGGCCCTCGGCAAAGAGACTATGAGTGGCATAGCGACGGCCCTGCAACACTCGGAAAGCACAGCGTTGAGGTATTACCAGCTGCCAGATTCGAACGAGGCACTGAGGCGGCAAACGACCATAGACACGGTTGACGCGACAGCCGTGTTCGAGAGTCTGGTCGAGGACGAatTTCCGGAAGTATTTAATCCGTCACCATACATTGACGTGAGCAACGGGGACACGGTCAGGAAGAACCTGGAAAAAACAGAGGCCCGAAGCAACCCGTTGGCCAGCGTATCTGACCAAATTATCATTCGGTATCAACTTTGGTTCACCGAATATATGATGGATGAACGTGTTGACGTGACCGTCGGTCTGCTTAAAGGCAAATCCATGCGAGACGTGACGAAAGTGTTGAAGTCAGAAGGGCTGAGCTTTTTTTTGAGGATGAACTCTAAAGAGTTTTTGACGAAAGTCGAAAAAAAGCTGAGCCGTAGTCCTCCAGCACAATAA
- Protein Sequence
- MENALNELKFGTMSISQAARHYMVPETTLREYAKKRNICVKTAKRSYNKTSENIALKEAILLVQQGMPINLASRIKKVPKTTLSVAFKKMSKAPAITQQAPAVEEQAPAVEEQAPAITQQAPAVEEQAHAITQQAPAVEEQAPQRPKTAIKRIVKFKGDKIEEVKKVFEVHSRMAYYPKPVKYVMKRLDLTEDPAHEEIQGDRVVVVKRNSHVRFSEDGSVVPAIDSPFTDDDGFEIADLNRLNIYTPSPSTTPSHPYDFFEEELSEIGEYKPKKPIADVDRESPESPKAGPSGSCGYPPAELRNTRQSPLITFKSVQCDSGEALMVASDNETSIVDTPSPLNVDDWNSEDRPVKIDSNFDHRVDSLITNRLLKYCPICKYKTQDNKMTRHIALKHASLLRTPVTKSLAAIGRIYGSHSRRSISLVPMVAMKTVIGPLGRCAVKTDSLQNRHNGQASSIWRVVGPPRVPPRCTESVCAMVKSCTSRPSLQEWTISREEPVFQMFRTTFPCLRDSSQKFRKTLQESGYQEQLPTDHPLLKLYRRSLSLSHGDESSAAKNYTANVAKMLYFVDAWLKDRKTPAKHWSQLLGTSEEPFREYLSKREELGQTIATSINYLKNLNALYELALSCYCLEDPSFPQSFDSTPCPSRINAIKVVKQKLKLIYKNKIKNQPQELFNRKTEEARTVPEYLEVYQIIKRISESIPKTLTQLEEHVGEEGPVDVSTYRDSAPIQKHLSTLWRSVSCGLALTCLWISKHRSGVVTNCTVAEFENRKKEGSKIIITVSKHKTGDKEPAMMVFDQDDTAAHLERYYKLRTRVRTSVKEHDEDITSRGKRLTKLYEEINRIYKCQLSANIFRRMVETQSRALGKETMSGIATALQHSESTALRYYQLPDSNEALRRQTTIDTVDATAVFESLVEDEFPEVFNPSPYIDVSNGDTVRKNLEKTEARSNPLASVSDQIIIRYQLWFTEYMMDERVDVTVGLLKGKSMRDVTKVLKSEGLSFFLRMNSKEFLTKVEKKLSRSPPAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940327; iTF_00940326;
- 90% Identity
- -
- 80% Identity
- -