Meup003618.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- foxj1-b
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000001.1:45777207-45779163[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-30 3.8e-26 92.9 0.0 1 83 84 163 84 167 0.93
Sequence Information
- Coding Sequence
- ATGTTGGATATCAAGAGGTCAATTTCCATGCTTCCAGCACCAGTAAACTCGGAACCGGACACGGATCTGACCAGTCTGAACTGGTGCCACAGTTTGACGAAACATACTTCTGTGCCATCTCTGCCTACGCCTCCTGATTCGCCTAATTCACCAACACGTTCAGCAGATCAGAACCCGAAAAAACTTCCGCACAAAATCCGTTTCCAAATGAGTTTGGAAAGTGCtgaacaatacaaaaataatggtGACAAAAAACCGCCATTTTCATACTCTACGTTGATTTGTATGGCCATGAAAGCTAAAGGGAATAAAGTTACTTTAAGTTCTATTTATGGTGGATCAGGGAAATTTTTGTACTACCGAAACGCCGATCCTAGTTGGAAgaatTCAATCAGACACAATTTATCGTTAAACAAATTCTTCGTGAAAGTGCCCCGATCTAAAGATGAACCAGGTAAAGGAGGATTTTGGAAGTTTGATGTTGATTGCTTAGAAGGTGGTGCTCGACGTAAACGAACAAGTAGCCGGAGGCGGGCAAGTCGGATGCAACAAAAGAACAACGCGAGCAAGGGGAGCAACGGAGAGATGACCGTCGAGGACGAAAAAGCGCTCCAGTTGGCCGTCATGTCGCTGCAGGAAGAGGAGCAACGACATATGGACAACAATTTGGACGGTTTCCACCAGCAGCCGATGATACTTCCTGTCGACGAGCCGATGGGCGAACCCGAGTTGATCTACAGCTGTTCGATAAACGCAGCCACCGTGGATCCGTTCATGTCTTCTGTAGTCGATTACACGATAATCGACATACCCAACGACCATCATCAGCCGCAAATCGCCACGGACGACGAGCTAACCATGCTCACGAACTTGACGTGGGACGATTCGCAAATGGACCTGCTCGATTCGTTGCTAGACTCGTTGTAG
- Protein Sequence
- MLDIKRSISMLPAPVNSEPDTDLTSLNWCHSLTKHTSVPSLPTPPDSPNSPTRSADQNPKKLPHKIRFQMSLESAEQYKNNGDKKPPFSYSTLICMAMKAKGNKVTLSSIYGGSGKFLYYRNADPSWKNSIRHNLSLNKFFVKVPRSKDEPGKGGFWKFDVDCLEGGARRKRTSSRRRASRMQQKNNASKGSNGEMTVEDEKALQLAVMSLQEEEQRHMDNNLDGFHQQPMILPVDEPMGEPELIYSCSINAATVDPFMSSVVDYTIIDIPNDHHQPQIATDDELTMLTNLTWDDSQMDLLDSLLDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463172;
- 90% Identity
- iTF_00134057; iTF_01304001; iTF_01304673; iTF_01328428; iTF_01305360; iTF_00972867; iTF_00463172; iTF_00468778; iTF_00018833; iTF_01032698; iTF_00184422; iTF_01037560; iTF_01167419; iTF_01031770; iTF_00135132;
- 80% Identity
- -