Mann000415.1
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963924015.1
- Location
- OZ001257.1:4286307-4289490[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 1.5e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 20 1.1 1.6e+04 -3.3 2.8 4 10 161 167 158 167 0.86 3 20 3.9e-08 0.00056 20.5 17.2 1 19 175 192 175 192 0.99 4 20 8.9e-09 0.00013 22.6 15.9 1 19 228 246 222 246 0.86 5 20 1.4 2.1e+04 -3.7 1.1 10 14 253 257 251 257 0.71 6 20 0.73 1e+04 -2.7 0.8 5 10 270 275 270 275 0.86 7 20 0.055 7.9e+02 0.9 9.2 1 18 281 299 281 300 0.88 8 20 1.7 2.4e+04 -3.9 0.7 6 10 325 329 324 331 0.58 9 20 7.8e-06 0.11 13.2 9.8 1 18 335 352 335 353 0.97 10 20 0.26 3.7e+03 -1.3 0.2 1 5 362 366 362 368 0.95 11 20 0.0034 48 4.7 8.0 1 12 387 398 387 398 0.94 12 20 0.041 5.9e+02 1.3 1.0 4 10 406 412 405 412 0.97 13 20 8.6e-08 0.0012 19.4 14.6 1 19 418 436 418 436 0.93 14 20 0.00017 2.5 8.9 8.9 9 19 484 494 482 494 0.90 15 20 0.0031 45 4.9 5.6 1 12 504 514 504 514 0.95 16 20 1.2 1.7e+04 -3.4 6.7 14 19 543 548 543 548 0.90 17 20 7.8e-05 1.1 10.0 3.1 1 11 584 594 578 595 0.90 18 20 0.00072 10 6.9 15.7 3 19 624 640 623 640 0.92 19 20 0.00032 4.6 8.0 11.3 1 16 685 699 685 705 0.92 20 20 0.72 1e+04 -2.7 0.4 5 10 734 739 734 739 0.92
Sequence Information
- Coding Sequence
- atgagaaaattcaaaagagcTCAGGCTCAAAATCAGGCCGCTATTGAAAAGCACATGGAAACACATCCTTTGGTAGAATCATCTAGCGACGAAGAGGATGAAGCTGGGCAAGAAATATTGGAAAAAGCTGTTGGCAAAGTCCTCACTTCTTACCAAGATCAGGGAggagattctgaaaaaattctatcatatTTAGAAGATACTTTTCAATCTAATGGAGCTGTTTGCTTAATTTGTATTTCCTCAGTCAAGAAAACTGACGCGatttgGAGCTGCGGGAGATGCTATTCTTTCATGCATCTACCCTGCATTCAGCACTGGATTAAAGACAGTTTAACTTACAAACGAGATCGGGGAATATCTCAATTCTGGGCATGTCCAAAATGTCGTACAGAGTACGAGGAATCCGAGGCTCCAAAAGACTACGAATGTTTTTGTGGAAAGACAAGAGATCCGCCCTACCAGCCATGGTGTGTCCCTCATTCCTGCGGCGAAGCCTGCGGAAAGGATCTTCAGCCAAAGTGTGGTCATACATGTGTCCTGCTTTGTCATCCAGGGCCTTGTCCTCCATGCCCAAAGATGGTCTCCTCAAAATGCTACTGTACCAAACAGCCTCCACATCCGAGAAGGTGCAATGCAAAAGAGTGGAGTTGTGGTACTGTTTGCGGAAAAGATTTAAAGTGTGAGAAACACACTTGCAAAGAGACTTGTCATTCCGGAGACTGTCCACCTTGTccagaaaaaatttcagcatcTTGTCATTGCGGGAATAAAACTGAGATAAAATCGTGCTTCGATTCAAATTGGCGTTGTGATAAACCTTGCAAAAAGCTCTTATCCTGCAACGTTCATGTTTGCCAAGGCGTTTGTCATCTTCCGAACGATTGTGGAGACTGTTTGACCGCTAGGAATAGAACGTGTCCATGTGGGAagagaaaatacaaaatatcttGCAAGCAGGAAGCAGCTACTTGCGGAGATACCTGCGAGAAATTACTGGATTGCGGATCACACTATTGCAATAAACGTTGCCATGCCGATAGCTGTGGTCAATGCTTAGAAGTTGTTACTAAATCTTGTAAATGCGGTTCTCACAAGAAAGAGATAGCTTGTGCAAAAGTATTCCACTGTGACACCAAATGCAAGCAGATTCGACTCTGTGGCAGACATCCTTGCAATAAGAAATGCtgcgattgtataaaaaagaacaattttcACGCCTGTGAAAAGACCTGTGATCGAACTCTTAGCTGCCGTAAACACAAATGCTCTGCTCCTTGTCATAGCGGACCTTGCTATCCCTGCCCAAGGACAGATACAATACAGTGTCGATGCGGTTCGAGCAAAATAGTAATCCCCTGTGGTACagcgaagaaaataaaacctcCTCACTGCAATAAGATGTGCAAAATACCGCCGATTTGTCATCACCCAAAAAGAGAGTCTCACAAATGTCATCAAGGACAATGTCCTCCTTGTAAAAAACAGTGTGCTTTAATACACAAAAAATGTGGCCACATTTGTCCAGCCCCTTGCCATACCAAGGTTTGGGTAAAAGTTAACGGCGTTACTCAGCCTGCAGGGCCTTGGGAAAAACAGAAAGATAAAATGCAGCTGAAAACTCTGCCCTGTCCCCCCTGCCAGGTCTCAGTTATGGTAACTTGTTTGGGTGGGCATGAGACTTTACCGTGGCCTTGCCACAGAGCTGTATCAAGCTCTTGTCAAAGAGAGTGTGGCCAGGTTTTGAACTGCACTAATCATACCTGCACGTTTTTATGCCACGTTGTTAAAGCCGCGGGAGATGTGGGCACAGCAGTGGTTTGCGAGGAGTGTGTAAAGCCTTGCGTTATTCCTAGGCCTGAAGGGTGCACTCATCCTTGTCCTAGCGTCTGCCATAAGGCTCCGTGCAAACCTTGTAAACAGATCGTTAGATTACCTTGTCATTGCTCTATCAATAGCTTGTATATTAGATGCTCTGAACTTACTTCTGCCAATCTGGAGACTAGGAGAGAGATGTTCAAATGCGGCAATCAGTGTCCTAAGAATTATCCATGCGGACATCGATGCGTGGAGGATTGTCATCCAGGATTATGCGAAGGTGCAGAAGATTGTaataagaaagtaaaaatctgGTGTAAATGTAAGAGATTGAAGAAAGACTTTTCTTGTCTTGCTGTAAGATCAGGAGAGGCTGTTGTCAAATGTGACGATGTTTGtcaggagaaaaagaaagaaagaattcaaGCCCAGGAGGCTGAAAtagcaaagaaaagaaaagaggaagAACTTCGGAACCAAAGagaggttgaaaaatttgaaagaaaatttaaacctAGACGTAAATGTAAGGATAAGTCCTTAGACGAACCGCAagttgaagaaagaaaatttaattatttaatatggCTCACAGCGATATTTGTCATCACCATAGCTTGTCTAGTCACTTTTTACGGTATCCAGATATAA
- Protein Sequence
- MRKFKRAQAQNQAAIEKHMETHPLVESSSDEEDEAGQEILEKAVGKVLTSYQDQGGDSEKILSYLEDTFQSNGAVCLICISSVKKTDAIWSCGRCYSFMHLPCIQHWIKDSLTYKRDRGISQFWACPKCRTEYEESEAPKDYECFCGKTRDPPYQPWCVPHSCGEACGKDLQPKCGHTCVLLCHPGPCPPCPKMVSSKCYCTKQPPHPRRCNAKEWSCGTVCGKDLKCEKHTCKETCHSGDCPPCPEKISASCHCGNKTEIKSCFDSNWRCDKPCKKLLSCNVHVCQGVCHLPNDCGDCLTARNRTCPCGKRKYKISCKQEAATCGDTCEKLLDCGSHYCNKRCHADSCGQCLEVVTKSCKCGSHKKEIACAKVFHCDTKCKQIRLCGRHPCNKKCCDCIKKNNFHACEKTCDRTLSCRKHKCSAPCHSGPCYPCPRTDTIQCRCGSSKIVIPCGTAKKIKPPHCNKMCKIPPICHHPKRESHKCHQGQCPPCKKQCALIHKKCGHICPAPCHTKVWVKVNGVTQPAGPWEKQKDKMQLKTLPCPPCQVSVMVTCLGGHETLPWPCHRAVSSSCQRECGQVLNCTNHTCTFLCHVVKAAGDVGTAVVCEECVKPCVIPRPEGCTHPCPSVCHKAPCKPCKQIVRLPCHCSINSLYIRCSELTSANLETRREMFKCGNQCPKNYPCGHRCVEDCHPGLCEGAEDCNKKVKIWCKCKRLKKDFSCLAVRSGEAVVKCDDVCQEKKKERIQAQEAEIAKKRKEEELRNQREVEKFERKFKPRRKCKDKSLDEPQVEERKFNYLIWLTAIFVITIACLVTFYGIQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303874;
- 90% Identity
- iTF_01303874;
- 80% Identity
- -