Basic Information

Insect: Macrophya annulata
Gene Symbol: su(Hw)
Assembly: GCA_963924015.1
Location: OZ001263.1:17056399-17061217[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0019 0.2 12.8 0.1 1 20 63 82 63 84 0.95

2 13 0.00044 0.045 14.8 0.5 1 23 161 184 161 184 0.94

3 13 0.017 1.8 9.8 1.9 2 23 191 213 190 213 0.95

4 13 4.3e-05 0.0045 18.0 2.7 1 21 219 239 219 240 0.95

5 13 6.2e-08 6.4e-06 27.0 2.4 1 23 251 273 251 273 0.98

6 13 0.00094 0.097 13.8 1.4 2 23 284 305 284 305 0.97

7 13 0.0039 0.4 11.9 0.5 2 23 312 333 311 333 0.97

8 13 5.1e-05 0.0053 17.8 4.5 1 23 339 361 339 361 0.99

9 13 1.4e-05 0.0015 19.5 2.1 1 23 367 389 367 389 0.94

10 13 2.6e-06 0.00027 21.8 1.1 1 23 395 418 395 418 0.95

11 13 5.9e-05 0.0062 17.6 0.6 1 23 424 446 424 446 0.91

12 13 6.7e-07 7e-05 23.7 2.3 1 23 452 474 452 474 0.98

13 13 3.8e-07 3.9e-05 24.5 2.1 2 23 481 503 480 503 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0019	0.2	12.8	0.1	1	20	63	82	63	84	0.95
2	13	0.00044	0.045	14.8	0.5	1	23	161	184	161	184	0.94
3	13	0.017	1.8	9.8	1.9	2	23	191	213	190	213	0.95
4	13	4.3e-05	0.0045	18.0	2.7	1	21	219	239	219	240	0.95
5	13	6.2e-08	6.4e-06	27.0	2.4	1	23	251	273	251	273	0.98
6	13	0.00094	0.097	13.8	1.4	2	23	284	305	284	305	0.97
7	13	0.0039	0.4	11.9	0.5	2	23	312	333	311	333	0.97
8	13	5.1e-05	0.0053	17.8	4.5	1	23	339	361	339	361	0.99
9	13	1.4e-05	0.0015	19.5	2.1	1	23	367	389	367	389	0.94
10	13	2.6e-06	0.00027	21.8	1.1	1	23	395	418	395	418	0.95
11	13	5.9e-05	0.0062	17.6	0.6	1	23	424	446	424	446	0.91
12	13	6.7e-07	7e-05	23.7	2.3	1	23	452	474	452	474	0.98
13	13	3.8e-07	3.9e-05	24.5	2.1	2	23	481	503	480	503	0.97

Sequence Information

Coding Sequence: ATGTCTCAAATTATAGAAATCGTTAAAATTGAACATCCCATCTCCGGGAAGGAGGAggatgttgaaattttattcgGTGACTCACAAAACGAAAATGCTCTACAGGCTGCAGATGCTCAGGAGGAAACGATTTTTAACGGAGAGACAATATCTCAAGATAcacaaattattgaaattgtaaCAAACTACGAATGCGTTACTTGCCGGCGAATATTCACGTCCGAAGATACGTTGAAAGATCATTTGGACGTATGTAGAGACGAAGATGACCGTTCAGATACTTTGGAAATAGGTCAAATAGCTGATTACGATTCAGACGAAGAAGAATATGTCGACGATCCAGATGATGAGGATTCCAAAAGTGGAACTGATTCAGCAACTCTTAAGAACAACAACGGATCAGCTGCTATAAAGCCTGTATCCCCTGACAAATGCCATTGCTGTGGTGAGGATTCGTCTACAGCGCATACCGGAGGAGACTATCAATGTACAAGTTGCGAGTTCTCTTTCAGAAGAATAACAGCCCTAGAAAGGCACAGGGTAGTGGTTCATTACCAGCTAGAATCCCTAGTTTGTAAAGCTTGTGGAGTAACTTGTGGCAATAAAAAAGCATTGGAAAAACACCACTACACTGTTCATGCCAAGCATCAAATATTTAAGTGTGAACGCTGCGACAAATACTTTTCAAGAAAGTATCACTTGGATAGACACGTTATGCAAACTGGATGCGATGGTGTTTCCCGTAGCAGTTACGCTTGCCAAGTTTGTCACAAGGTCTTCACCCGCAAGGACAATTTGCGCGAACATTTGCGTATGCATGCTGGAGCTCCACAAAGACAGAAAAAGGCAGTGTGCGCCCATTGCTCTAAGAAATTTTACACTGTTCAACAGTTGGTGATACACGAACGTACTCATACCGGTGAACGACCTATTTCATGCGATCTGTGCAAAAAGACTTTTCTATCAGCACCTGCAATGAAAAAACATCGGCGTGTTCATACAGGGGAAAAACCATTCCAGTGCAAATTTtGCGAAAAGAGATTTGCAGCACGCGAAACTTTAAATCGACATCACCGTACTCACACCGGAGATAAACCCCACGTTTGTCAATATTGTGGTAAAACATTTATCCAAGCAGTTCAACTTCGGGCTCATGTATTTCATCATACAGGAGAGAATGCATTTTATTGCGAAGTTTGCGGCAAGGCATTTAATCGTAAAACCCGACTAACTGTACACATGAAATTTGTCCATGAAGGAGCTACGCCGTTCCAGTGTGACGCTTGCAACAAGTCTTTTATTCGAAAGGAGGATCTTTCCAGACATTCCGTTCTTCACACTGGAATCAAACCACACAAATGCGATAAATGTTCAAAGACATTCGCAGTAAAGTCTGCACTGCGTGTTCATATGAATACACATAGACGTGAGTTGCCACAATCTTGTGATGAATGTGGACGAGCATTTATTAGACAAGACTGTCTTATGAGACACATGCGAACCAAGCATAGAGATATGCTAGAAGATGCTGTGGCAGAAGCCGAGAAGCGACGCTTGCAAAAGCAATTATTCAACATTGCTTCTAGCGCTGCTGCAAAGACAAAAAGTGTTAAATCAAGCGTTACTGTTCTTACGCAAGATAAATTACTCAAAGTTATTGTAGAATTGCTGACTCTTCTTGTAGAAGAAGAAACTTTACAGGCTTTTGGATGGCCTGAGGCACCAATACAAGATATTCTGGAGGCCGTAATCAAGCGTTGCGGTCATCAGCCAATCCCATCAGATagtgatttattatttgctcAACGTCTGagagaaaatgttaaaatattattcactgTAGTTATCGAAGATGATACTGTTAAATCACTTTTGACCACACAAACTGTGGACGAGGTAATCTTACATGTTTTGAAATTGTCCAAAGAGAAATGA
Protein Sequence: MSQIIEIVKIEHPISGKEEDVEILFGDSQNENALQAADAQEETIFNGETISQDTQIIEIVTNYECVTCRRIFTSEDTLKDHLDVCRDEDDRSDTLEIGQIADYDSDEEEYVDDPDDEDSKSGTDSATLKNNNGSAAIKPVSPDKCHCCGEDSSTAHTGGDYQCTSCEFSFRRITALERHRVVVHYQLESLVCKACGVTCGNKKALEKHHYTVHAKHQIFKCERCDKYFSRKYHLDRHVMQTGCDGVSRSSYACQVCHKVFTRKDNLREHLRMHAGAPQRQKKAVCAHCSKKFYTVQQLVIHERTHTGERPISCDLCKKTFLSAPAMKKHRRVHTGEKPFQCKFCEKRFAARETLNRHHRTHTGDKPHVCQYCGKTFIQAVQLRAHVFHHTGENAFYCEVCGKAFNRKTRLTVHMKFVHEGATPFQCDACNKSFIRKEDLSRHSVLHTGIKPHKCDKCSKTFAVKSALRVHMNTHRRELPQSCDECGRAFIRQDCLMRHMRTKHRDMLEDAVAEAEKRRLQKQLFNIASSAAAKTKSVKSSVTVLTQDKLLKVIVELLTLLVEEETLQAFGWPEAPIQDILEAVIKRCGHQPIPSDSDLLFAQRLRENVKILFTVVIEDDTVKSLLTTQTVDEVILHVLKLSKEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00159274;
90% Identity: iTF_01413605;
80% Identity: -