Basic Information

Gene Symbol
snpc-4
Assembly
GCA_963924015.1
Location
OZ001260.1:9084814-9087588[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.15 2.4e+02 2.6 0.0 22 43 269 292 256 295 0.80
2 5 2.7e-11 4.3e-08 33.8 0.1 1 45 301 347 301 348 0.97
3 5 3.7e-11 5.8e-08 33.4 0.1 3 44 358 403 356 405 0.96
4 5 3.9e-11 6.2e-08 33.3 0.0 1 45 411 456 411 457 0.94
5 5 2.3e-12 3.6e-09 37.2 0.2 2 41 462 501 461 502 0.97

Sequence Information

Coding Sequence
atgagcGATTCAGAGGACGAAGATGTAATTCTCGACGACATAAAAGCGTTGCAGGCGGTTTTAACCCAGAAACAAACGGGCAAACAAACAGCTCGAGTTAAAGTAGAAGTAAAATCGGAAGatagaattttgttaaaaCCTAACCTATACGAACCGTCAACATCAAAATCCGCCGATATTCAACCTTCAACGTCGAATACGGTCGAAGATTTAGCGGATATAGAAGCAGAAGAAAGTGATAATGAATGTAACTCTGAATCCGAAGAAGATGACAACGATTTACAGGATTTATCAGACCCAGAAGCTGCATTAAATTTGAACAGAAAAATCGTGCATCTTTTAGCAACGGCACAAAGTCGTCTCCATCTCCTTCTAAAAGAATGTAGAAGACGTCAATCATTAATAGACCAAAAAATACGTCAAAGAACGTCTGATCCATTAACTAGAACACTTCTAACAGTAACTGGAATTCCTTATTTTAAAGACAAACAGCATTTTCCAGCGCCACAGAACGAAGATGCAAAATTAAAGACGAGACGTGGAGAGTTGCAGATTATTGACTTGCCTTGTCCTCTTCGGTGGACATTGAAAGACAGAAATACATTATGGGAAGCAATTGCGTGGAATGCTAGAGTCATTTATCACGAAGAAATGAGACAGCGGGAACCCCGTgacattgaaaattctttaaataatacaGAGGATCCTCTGAGGTTGGACCATAAATATagggataaaaaattacttgaaGAAACGCTTAGGAACATTAAACCTTTGGTCGGTCCATTGGGAAGCAAAGAATTTGATTGGTTGAAAATAGCGGCAACTGATTTCAATGGAAGACACTCTGCCAATGAGTGCAGGGCGATGTGGAATGTATTTTTACACCCTGATATAAATAAAGGGAAATGGAAAAAGGCTGAAGATTCTATTCTCAAGTCACTTGCCGAAGAATACAACTTTCAGAATTGGGACCTGGTGGCTAGTAGATTAGGAACAAATCGAAGCGGATATCAATGCTTCATTAGAtttaatacgaattttaaaaacaatatGTTTAGCAGAACTAGTTCGTGGTCAAAAGAAGAGGACCAGAAACTTACGGATGCTGTAAACACTTTGAGAACTGGTAATTTTATTCCGTGGGGAGAAGTAGCCAAAGTAATGGGAGATAGAAGGAAACAGCAGATTTATATGCGATGGAATTACAGCCTAGCACCGAACTTGAAAAAGGGTAGATTCACTGAAGAGGAGGATAGGCTGCTCCTCCAAGGAGTTGCTAAATTTGGatctaattttacaaaaatttctgtcgCCCTATTGCCGCATAGAAATACTGCACAGTTAAACGATCACTACAGAACTCTTATGAATGAGAAACAGAACAATTGGAATTGTGAGGACGACATGAAATTGGTAAAGCTATTCGACAAGTTTGGTAACAATTGGTCAGCTATTgccaaagaattttcaaacaagTCTAGAGTACAAGTCAGACATCGTCATACTGCGATTATCCGATATCTTAGCAGAGGCCTTTCTATAAGGACTATACCTAGGTGGGGACcaaaaatagaagagaaagatactcaagaaaatatattaaaccgTGGAGAAAAAATGCTCGATGAGATGAGCGAGATGATGAGGATTCAGCAGAGCAATAAAGAAGCAGAGAGAAGAGAGCAACTGTCTAAAATCGACCAGGAACTGAGGGATTATTTCAAAGCAATATATCGGTCTCCTTCTAAACTCGGGAGACACAAGAAGTGTTACTCTATTGAAAAGGTTAATGAAAAAACTCAGAAACTTGACGTTATTTTGAATATGTTAAAAGCTGATCTTGATATTCCTGATGACTTGGAGGAGGAAGTATTCTTGACGGAGAAAGACAAGCAGCTACTGACTTCCTTGAAAGCTTATTCAGGAAGTGAATCCTTAGATTCTGAGTCCCAACCAGAATACTCAGAACACATTAGGCGGAAGATGTTTGGATCATTAATTCCGTTGGCTAGTGCAGATCATTTCATACCACCGTTACCATTCAGTGGAAAAGtccaaagaacaaaaagaaaaaagcttgTAGGGATAAACTATTTTCCTAGTGGAGATAAATGTCTCGCCGAAATAAATCATCAACTTAGTACGCCAGAGACAATTATATCGTTAATCGGTGGCTGGGAAACcgaaatagaatttaataatatgGAAAAGATATTCATTCCCAAGACTGAACAATCAATAGAAGATTTATCTACGACAAATCCTATTTTTGACCCAAACGCCCCAAGTACCTCTGGTATTGTTATCAATGAAAGTAGGAATGTTGGGCAGGAAATTTTATCCAACACAGATCAATCATCTTCTCAAATAATTAGAAGAAATTTGTCGAAATATTATCCAGAAGTTTTAATACCACCAAACTATACCACGTTACTAGGTTTTCGTGGCTTATTGTTATCGAAACATATTCTTGAGGCAGATGCTTCGGAAGAAGACGaatacgaagaagaagaatgtgTGATGACACCAGAGGGAGAAAAGGCTTTGGAATTATTTGAGGAACGGCTAGTTAAACTCTTCAAATTTCCTATAGAATTGTCAGAAATAGCACCGCCTCTATTACACGTATCACAAAATGGACAATTCAATGATAGTGACAATGATGATTgcgggaaaaaaagaaaagcaaataAGACGAACTCTGGACCAGTAGCtaagaaaaaagcaaaagtcgaaaaaattgatgttgcAGAAAATTCCGAGGCTCAATAA
Protein Sequence
MSDSEDEDVILDDIKALQAVLTQKQTGKQTARVKVEVKSEDRILLKPNLYEPSTSKSADIQPSTSNTVEDLADIEAEESDNECNSESEEDDNDLQDLSDPEAALNLNRKIVHLLATAQSRLHLLLKECRRRQSLIDQKIRQRTSDPLTRTLLTVTGIPYFKDKQHFPAPQNEDAKLKTRRGELQIIDLPCPLRWTLKDRNTLWEAIAWNARVIYHEEMRQREPRDIENSLNNTEDPLRLDHKYRDKKLLEETLRNIKPLVGPLGSKEFDWLKIAATDFNGRHSANECRAMWNVFLHPDINKGKWKKAEDSILKSLAEEYNFQNWDLVASRLGTNRSGYQCFIRFNTNFKNNMFSRTSSWSKEEDQKLTDAVNTLRTGNFIPWGEVAKVMGDRRKQQIYMRWNYSLAPNLKKGRFTEEEDRLLLQGVAKFGSNFTKISVALLPHRNTAQLNDHYRTLMNEKQNNWNCEDDMKLVKLFDKFGNNWSAIAKEFSNKSRVQVRHRHTAIIRYLSRGLSIRTIPRWGPKIEEKDTQENILNRGEKMLDEMSEMMRIQQSNKEAERREQLSKIDQELRDYFKAIYRSPSKLGRHKKCYSIEKVNEKTQKLDVILNMLKADLDIPDDLEEEVFLTEKDKQLLTSLKAYSGSESLDSESQPEYSEHIRRKMFGSLIPLASADHFIPPLPFSGKVQRTKRKKLVGINYFPSGDKCLAEINHQLSTPETIISLIGGWETEIEFNNMEKIFIPKTEQSIEDLSTTNPIFDPNAPSTSGIVINESRNVGQEILSNTDQSSSQIIRRNLSKYYPEVLIPPNYTTLLGFRGLLLSKHILEADASEEDEYEEEECVMTPEGEKALELFEERLVKLFKFPIELSEIAPPLLHVSQNGQFNDSDNDDCGKKRKANKTNSGPVAKKKAKVEKIDVAENSEAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00938620;
80% Identity
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