Mann007263.1
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- -
- Assembly
- GCA_963924015.1
- Location
- OZ001258.1:17436805-17437758[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 2.9e-06 27.5 0.0 7 39 18 50 17 54 0.88
Sequence Information
- Coding Sequence
- ATGCCTCGAAATTACATACGAAAGACTGAATCAAAATACCAAATTGAACAACTTGCAATCGAAGATGTCAAAAGTAAAAAGCTCACATTGGGCCAAGCTGCTACCAAATACTCAGTACCAAAAACAACATTATTCAAACaactaaaacaaaacgaaTTCAAGATACCAAAAAAAGGTCGACACACTGTATtcaataaagaagaagaagaccaGCTAGAAAAATACATACTTGATTGCTGCAAGTCTTTTTATGGCATAACACCAAATTCATTACGAAGAATTGCTTTTCGATTTGCTGAAGCTAACAAACTGAAACACAATTTTAACAAAGAAACCCAGCTGGCAGGCAAAGACTGGTACTATTGCTTTATGTCTCGACATCCTTCCATCAGCTTACGGGTTCCAGAAGCTACTTTACTTAATAGAATAACAGCGTTTAACGCCACCGAAGTGAATCTGTTTTTTGATCAACTAAAAACGATCCAAACAAAACACAATATACCTGGTCatcgtatttttaatattgatgaaactGGCATTAGCacagttcaaaaaaattacaagattTTGGCTCCAAAAGGTTTAAAACAGATAGCAAACGCGACAAGCGGAGAACGCGGTGTCACAACAACAGTAGTTTGTGCTGTCAGCGCTAGTGGCATATATGTACCTCCCATGTTTATCTTcaaaagaaagagaatgaACGAACTGTTAGTTAAAGGCTGTAACAGCGACATGATTGCCACGGTTTCTGATTCCGGTTGGATAAATGAATCCATATTTCTTGACTACTTGCAACACTTCATTTCTTTTGTGAAACCTACCAAAGAAGAAccaatattattaatactcGACAATCACGAGAGTCATATCAGCCTGGGAGCGTACAAGCTTTTCCGAGAGCACAACCTGCAAGTTCTTTCCTTGCCACCCCATGTATCTCACAAAATGTAG
- Protein Sequence
- MPRNYIRKTESKYQIEQLAIEDVKSKKLTLGQAATKYSVPKTTLFKQLKQNEFKIPKKGRHTVFNKEEEDQLEKYILDCCKSFYGITPNSLRRIAFRFAEANKLKHNFNKETQLAGKDWYYCFMSRHPSISLRVPEATLLNRITAFNATEVNLFFDQLKTIQTKHNIPGHRIFNIDETGISTVQKNYKILAPKGLKQIANATSGERGVTTTVVCAVSASGIYVPPMFIFKRKRMNELLVKGCNSDMIATVSDSGWINESIFLDYLQHFISFVKPTKEEPILLILDNHESHISLGAYKLFREHNLQVLSLPPHVSHKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00060121;
- 90% Identity
- iTF_01407171;
- 80% Identity
- -