Aequ023866.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- -
- Assembly
- GCA_963989295.1
- Location
- OZ022400.1:11972299-11973084[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-10 4.5e-07 30.2 0.0 3 40 16 53 15 57 0.89
Sequence Information
- Coding Sequence
- ATGCCTCGCAATTACATGCGAAAGACTGAAccaaaatatcaaattgaaGATCTTCGCCATGCAATCGAAGATGTTAAAAGTAAAAAGCTCACATTGGGCCAAGCAGCTACCAAATACTCGGTGCCAAAAACAACATTATTCAaacaattgaaacaaaaagaattcaaGGTACCAAAGAAAGGTCGATACACTGTATTTAATAAACAACAAGAAGACCAGCTAGAAAAATACATACTTGATTGCTGCAAGTCTTTTTATGGCATAACACCCAATTCATTACGGAAAATTGCTTTTCGATTTGCTGAAGCTAACAAACTGAAACACAGTTTTAATAAAGAAACCCAGCTGGCAGGCAAAGACTGGTACTATAGCTTTATGTCTCGACATCCTTCCATCAGCTTACGGATTCCAGAAGCTACTTCACTCAACAGAATAACAGCTTTCAACGCCACCGAAGTGAATCTGTTCTTCGACCAACTAAAAACGATCCAAACGAAACACAATATACCTGGTCATCGTATTTTTAATATTGATGAAACCGGCATTAGCACAgtccaaaaaaattacaagatcTTGGCTCCAAAAGGTTTGAAGCAGATAGGAAAAGCGACGAGCGGAGAACGCGGTGTCACAACAACAGTAGTTTGTGCTGTCAGCGCTAGTGGcatatacagtgagaatctggtcaaactttccactcagtcacagcctcctcggtacactccaagattttcgtctgttttcgcaggctggccatccccggtttttggtttgagctacagctga
- Protein Sequence
- MPRNYMRKTEPKYQIEDLRHAIEDVKSKKLTLGQAATKYSVPKTTLFKQLKQKEFKVPKKGRYTVFNKQQEDQLEKYILDCCKSFYGITPNSLRKIAFRFAEANKLKHSFNKETQLAGKDWYYSFMSRHPSISLRIPEATSLNRITAFNATEVNLFFDQLKTIQTKHNIPGHRIFNIDETGISTVQKNYKILAPKGLKQIGKATSGERGVTTTVVCAVSASGIYSENLVKLSTQSQPPRYTPRFSSVFAGWPSPVFGLSYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00265603; iTF_01407171; iTF_00939465; iTF_00174094;
- 90% Identity
- iTF_01407171;
- 80% Identity
- -