Mann000159.1
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- bab1
- Assembly
- GCA_963924015.1
- Location
- OZ001257.1:1307151-1309690[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.2e-08 2.4e-05 24.6 0.0 2 41 205 244 204 247 0.89 2 4 2.9e-10 2.2e-07 31.1 0.0 3 39 256 291 254 296 0.88 3 4 1.1 8.4e+02 0.4 0.0 26 34 332 340 325 345 0.83 4 4 1.1e-09 8.1e-07 29.3 0.1 4 39 371 406 368 412 0.92
Sequence Information
- Coding Sequence
- ATGTCCGAGGGCGATAGTCCGTTGAGCGGTAGTCAACAACAGCCAACGATATCTCAAAGTTACTGTTTTAAATGGAGCGATTACGAGAATCATGTACCATGCGTAATACGACAATTGTTAGAAGAGAACTCCATGGTGGACGTTACCGTTTCTGCTGACGGAATCAAGATTCATGCTCATCGCATCGTATTGTCTGCTTGTAGCACCTTCTTTCAAgaaATTCTAAACCAAGTAAATGAAGATTCCCCGACGATAATATTGAGCGGTATATCTGCGCAGGATATTCGTTGTATTATAGATTTTATGTACAATGGAGAAGTCAGTATACCAGTTGAGAATATCAGCAGTTTGTTAGACTCTGCTCATTTTCTGAAGATTCATGGTCTTATGGAGATCGATGGTTTGGACGAGAGTGACGGTACAACATGTGAAGATTACAATGAAGAGACTGTGGAATCATTGAGTGAACTTAACGAGGCCGAAGAGCAGGATTTAAATGCTCTAGAACAGGAGTTTGAGAATGTTACTAATAATCCTCTTGATGAAAACAGCGTTTCGACTACAGgtcagaaaagaaaacgaagacGAGATACTGCTAAGAAAGAATATAGCGAAGATATGCTCATGGCTGCTATAAACGATCTTAGGACAGGGCATACTTTGATAGAGGCTGCAACTAATCACGGAATACCACGTTCTACTTTGTATATGAGAGCCAAATCCTTAGGCTTGCATTTAAACGCTTCTAGGAATGAATATTCTGCAGAATGTATGAAAGCGGCGATAAATGCCGTATTAGaggGTTCCAGCCTGCAACAGGCATCAGAAATGTTCACTATACCTAAAACTGTGCTTTGGCGAAGAATTCAGAAAGAAGGATACCAAATACTTGGCCAGCGTACAGAAATGAAGAAATCTTACGACGCGGACAAGAGGGAGGCTGCGGTCAAAGCGTTAGAGAGGGGAGAAAATCTTACCAAAGTTTCTCTGCAGTTTCAAataCCAAAAACGACGTTGTTTAGAGACAAAGCTAGATTAGTAGATGAGGGAAAGCTTCCATTATCGTATTGGAAAAAACGTAAAACTGAAAAcgaggatttaaaaaaatcgaggCTGGAAGAAGCGGTGGCTGCTTGTAAATGCGGGAGAATGTCTCAAGCAGCAGCATCCATGGCTTACAGAATTCCAAAAACTACAATATGGAGAAGACTGCAACaggatggaaaaaaattgaatcgtcCGATTGATGAGGCGAgtcaaaaaaaatctgatgatCTCGACGATATAGATGACCAAAAAGGACAAGAGACTGAATTCACGTATTGCGAGGTTACTTCAGAGATACCGATAACATACATAGACGAAAACGGTATACCGGAAGATTCGGTGATAATTTTAACAACTGACGATGTAGACGGTATGAATCTTGAAGAAGGTACACAAATAATAGTAAGTTCGGATTCCGCACAAGAATACGTACCTTGCGCATTGAACATTGAAGACAATTCGAGTTATACAAACAGCGAAAGTTAA
- Protein Sequence
- MSEGDSPLSGSQQQPTISQSYCFKWSDYENHVPCVIRQLLEENSMVDVTVSADGIKIHAHRIVLSACSTFFQEILNQVNEDSPTIILSGISAQDIRCIIDFMYNGEVSIPVENISSLLDSAHFLKIHGLMEIDGLDESDGTTCEDYNEETVESLSELNEAEEQDLNALEQEFENVTNNPLDENSVSTTGQKRKRRRDTAKKEYSEDMLMAAINDLRTGHTLIEAATNHGIPRSTLYMRAKSLGLHLNASRNEYSAECMKAAINAVLEGSSLQQASEMFTIPKTVLWRRIQKEGYQILGQRTEMKKSYDADKREAAVKALERGENLTKVSLQFQIPKTTLFRDKARLVDEGKLPLSYWKKRKTENEDLKKSRLEEAVAACKCGRMSQAAASMAYRIPKTTIWRRLQQDGKKLNRPIDEASQKKSDDLDDIDDQKGQETEFTYCEVTSEIPITYIDENGIPEDSVIILTTDDVDGMNLEEGTQIIVSSDSAQEYVPCALNIEDNSSYTNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411401;
- 90% Identity
- iTF_01303579;
- 80% Identity
- iTF_00939736;