Mann004533.1
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- retn
- Assembly
- GCA_963924015.1
- Location
- OZ001258.1:174720-180906[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-20 1e-16 61.7 0.0 14 89 26 99 14 99 0.91 2 2 4.2 1.5e+04 -2.9 0.0 34 47 159 172 144 176 0.81
Sequence Information
- Coding Sequence
- ATGCAGTTTATAGCTTTATCCATGTCTCGGAGATACGATAGAAGAACAAAGCTCTATAAGGCGAGGCGCCGTGTTGCGCGATTAGGAACGCCGATCAACCGATTACCAATCATGGCAAAGTCTGTACTCGATCTGTACGAATTGTACAACCTAGTTATTGCCAGGGGCGGACTAGTTGacgtaataaacaaaaaactatgGCAGGAAATCATCAAAGGTCTTCATCTTCCGTCCAGCATCACATCGGCAGCCTTCACGTTGCGCACACAATACATGAAATACCTCTACCCGTACGAGTGTGAAAAAAGGCGGCTGTCAACCCCGGCTGAACTACAAGCGGCGATCGACGGTAACAGAAGAGAAGGACGAAGGAGTAGCTACGGGGCGTACGCGGGCGGTGGACCCGGTGAATCAATGGTGCGTGGAAGTCCCCACGCTCCCAGCTCGTTGTCGCTTCACGCCCAAATGTCACCCCTGTCCTTGGTCACCGCAGTGCAGGCGGCTGGAGGACAACACCACGGTCCACAGTCAATGGTGAACGGAAGTGCCGCCCACACACCGCTACCACATCATCCCCATCATCCGCAACATCCACAAGGACCTCTCGGTCAACCACTGAACACCGGACCAATACCAGGACTGGCGCCCTCAGAATTTGAGGCCCGCATGGTAGAGTACGTGAAACTTTTAAACAAGGAATTGCGTAGCGCCGGTGCCGGGACTCCACCTCCGATGATTCATCGGCAAGGTAGCGCCTCACCACCCTCGTCCACATCGCCGCGTGACGCTGCCCTAAACGCCCTTGAAATGTCACGACTAACCTTGTGGAATATGTACAACAACAACACCCTTTATCCAGGCGTTGGTCATCAGCCACCACTGTCGCCGCAAGCTCCACATTCTCCTTTACCGCCAGCCGCGAGTCCCGAACCACAAAGAGAAGCTCTCGACTTGGGTCTGAGATCTTCGCCAATGTCATCACCCCCCGCAAGAAACAGTCCGCCAACATCCGGAGGCAGCGTCCAAGTAAAAAGAGAACAGGATCTTGGAGGGATGACGATAGGTCCGCCGCCAGCTAAGAGATTACTTTCAGAGGATGATTCCACCCCCGAGAAAACGGTACCGGGATTGGCCGGGGctcatataaaaatatcaaacagaGGGGATGGTCGTAACGGTGAGAATTCACTTGTGGTCAGTATGGAATTGAACGGTATCATGTACCAGGGTGTACTTTTCGCGCAAAATGACAGCACCAGTAGCACCGGCACGACACACGGAGCCACGACAAACAACAATACAAAAACATCGCGCGGCGTTGTAtcgtga
- Protein Sequence
- MQFIALSMSRRYDRRTKLYKARRRVARLGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGPGESMVRGSPHAPSSLSLHAQMSPLSLVTAVQAAGGQHHGPQSMVNGSAAHTPLPHHPHHPQHPQGPLGQPLNTGPIPGLAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTSPRDAALNALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQAPHSPLPPAASPEPQREALDLGLRSSPMSSPPARNSPPTSGGSVQVKREQDLGGMTIGPPPAKRLLSEDDSTPEKTVPGLAGAHIKISNRGDGRNGENSLVVSMELNGIMYQGVLFAQNDSTSSTGTTHGATTNNNTKTSRGVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00718317;
- 80% Identity
- -