Malb011754.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- bab1
- Assembly
- GCA_949628255.1
- Location
- OX451207.1:46093163-46095643[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.8e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 2 4.5 4e+03 -1.5 1.4 6 15 153 162 151 165 0.88
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACCAACCAAAGTTTGGTCCACAATCTTCGGTTCCGAGAGCGCGGACCCCTCAAGTCCTGGAGGCCCGAGACCATGGCTGAAGCTATTTTCAGCGTCCTCAAGGAGGGTCTTTCGCTGAGTCAAGCTGCCAGGAAATACGACATCCCATATCCAACGTTTGTACTATACGCAAATCGCGTACATAACATGTTGGGTCCTAGCGCGGACGGCGGAGCCGGTGAGTATCTCCGACCTAAAGGTCGTGGAAGACCCCAAAGAATCCTACTCGGCGTATGGCCCGACGAACACATCAGAGGTGTGATAAGAGCCGTCGTATTTCGCGATGGACAATCCGCTCACATAGTTAAAGAAGAACCGGCCTCTATGTATCCAAGTCTTGCAAGTTACGCGGCATGCAATGGTCCCGAAGGTGCCGTGAGCCCAGGAGCTGCTGCGGCTGCCGCAGTCGCCGCTGTAGCCCAAGGTCTGCGACATCAAATGTGCAGCATGGTAGCAGCGGCACACTCCCAACAGCACGACATGATCGGTACAAATCTTTCCGCAAATTTGTCAACGAATATACAAGCCGCGATCCAAGCGCAACATAACAACGGAAATTCACCATTGAATTTAGGACTAGCAAGTCCGGGTTCAGGACCTCCGGAAAGTCCCATGGAAAGTCCTCTGGCGAGTCCGTTGGGACCGTTAATGGACCCAGCCCACATCCCCGGTAGTGTTGAACTTGGTATCGGAGTAAGCGGCATGACGTACAAACCGGCACGTAGTTTCGTTAGTCCAAGACCCGAGAATCTATTTCAAGAAGACATTGCGGACTTGGTCAAAAGTCCCCACGGTttaaaagataaagataaaatacCAGTGAAATTAGAACCTCTACAGGCGGATTCAAGGTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSAHIVKEEPASMYPSLASYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMIGTNLSANLSTNIQAAIQAQHNNGNSPLNLGLASPGSGPPESPMESPLASPLGPLMDPAHIPGSVELGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLQADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00939445;
- 80% Identity
- -