Malb011793.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- bab1
- Assembly
- GCA_949628255.1
- Location
- OX451207.1:46481059-46483622[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.6 4.9e+03 -1.8 0.1 31 44 186 200 184 201 0.82 2 5 6.4e-08 5.6e-05 23.6 0.0 2 37 205 240 204 247 0.88 3 5 2.9e-10 2.6e-07 31.1 0.0 3 39 256 291 254 296 0.88 4 5 1.1 9.9e+02 0.4 0.0 26 34 332 340 325 345 0.83 5 5 1.1e-09 9.5e-07 29.3 0.1 4 39 371 406 368 412 0.92
Sequence Information
- Coding Sequence
- ATGTCCGAGGGCGATAGTCCGTCGAGCGGTAGTCAACAACAGCCCACAATATCTCAAAGTTACTGTTTCAAATGGAGCGATTACGAGAATCATGTACCATGCGTTATACGACAATTGTTAGAAGAGAACTCCATGGTGGACGTTACCGTTTCTGCTGACGGAATCAAGATTCATGCTCATCGCATCGTATTGTCTGCTTGTAGCACCTTCTTTCAaGAGGTATTAAACCAAGTAAACGAAGATTCTCCAACGATAATATTGAGCGGTATATCTGCGCAGGACATTCGTTGTATCATAGATTTTATGTACAATGGAGAAGTCAGTATACCGGTTGAGAATATCAGCAGTTTGTTGGACTCTGCTCATTTTCTGAAGATTCATGGCCTTATGGAGATCGATGGTTTGGACGAGAGTGACGGTACAACGTGTGAAGATTACAATGAAGAGACTGTCGAATCGCTGAGTGAACTTAATGAGGCTGAAGAGCAGGATTTAAATGCTTTAGAACAGGAGTTTGAGAATGTTGCCAATAATTCTCTTGATGAAAACAGCGTCTCGACTATAGGTCAGAAGAGAAAACGGAGACGAGATACCGCCAAGAAAGAATACAGCGAAGATATGCTCATGGCTGCTATAAACGATCTCAGAACAGGGCACACCTTAATAGAGGCTGCAACTAATCACGGAATACCACGTTCTACTTTGTATATGAGAGCCAAAGCCTTAGGCTTGCATCTAAACGCTTCTAGGAATGAATATTCTGCGGAATGTATGAAAGCGGCGATAAACGCTGTGTTAGagGGTTCCAGTCTGCAACAGGCCTCGGAAATGTTTACTATACCTAAAACCGTGCTTTGGCGAAGAATTCAGAAAGAAGGATACCAAATACTTGGCCAGCGTACCGAAATGAAGAAATCTTACGATGCGGACAAGAGGGAGGCTGCGGTCAAAGCGTTGGAGAGAGGAGAAAATCTTACCAAAGTTTCTCTGCAGTTTCAAATACCAAAAACGACATTGTTTAGAGACAAAGCTAGATTAGTAGATGAGGGAAAGCTTCCATTATCATATTGGAAAAAACGTAAAACTGAAAACgaggatttgaaaaaatcgagactGGAGGAAGCGGTGGCTGCTTGTAAATGCGGGAGAATGTCTCAGGCAGCAGCATCCATGGCTTATAGAATCCCAAAAACTACGATATGGAGAAGACTGCAAcaggatggaaaaaaattgaatcgtcCAGTGGATGAGGCGGGTCAACAAAAATCTGACGATCTCGACGATATAGATGACCAAAAGGAGCAAGAGACTGAATTCACATATTGCGAGGTCACTTCGGAGATACCGATAACATACATAGACGAAAACGGTATACCAGAAGATTCGGTGATAATTTTAACAACTGATGATGTAGATGGTATAAATCTGGAAGAAGGTACACAAATAATAGATTCCGCGCAAGAATACGTACCTTGCGCATTGAACATTGAAGACAATTCGAATTACACAAACAGCGAAAGTTAA
- Protein Sequence
- MSEGDSPSSGSQQQPTISQSYCFKWSDYENHVPCVIRQLLEENSMVDVTVSADGIKIHAHRIVLSACSTFFQEVLNQVNEDSPTIILSGISAQDIRCIIDFMYNGEVSIPVENISSLLDSAHFLKIHGLMEIDGLDESDGTTCEDYNEETVESLSELNEAEEQDLNALEQEFENVANNSLDENSVSTIGQKRKRRRDTAKKEYSEDMLMAAINDLRTGHTLIEAATNHGIPRSTLYMRAKALGLHLNASRNEYSAECMKAAINAVLEGSSLQQASEMFTIPKTVLWRRIQKEGYQILGQRTEMKKSYDADKREAAVKALERGENLTKVSLQFQIPKTTLFRDKARLVDEGKLPLSYWKKRKTENEDLKKSRLEEAVAACKCGRMSQAAASMAYRIPKTTIWRRLQQDGKKLNRPVDEAGQQKSDDLDDIDDQKEQETEFTYCEVTSEIPITYIDENGIPEDSVIILTTDDVDGINLEEGTQIIDSAQEYVPCALNIEDNSNYTNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411401;
- 90% Identity
- iTF_01303579;
- 80% Identity
- iTF_00938879;