Malb027906.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- -
- Assembly
- GCA_949628255.1
- Location
- OX451212.1:18979356-18983131[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.8e-12 4.3e-09 36.8 0.0 1 39 268 307 268 311 0.90 2 4 6.4e-12 5.7e-09 36.4 0.1 2 39 323 360 322 363 0.94 3 4 2.3e-18 2.1e-15 57.0 0.0 2 45 378 422 377 422 0.97 4 4 1.4e-18 1.2e-15 57.8 0.1 1 42 429 471 429 472 0.97
Sequence Information
- Coding Sequence
- ATGTTGCAGTCTCTATTGAAAACTGCTGATCAATTGAAGATCAAGGGCCTCTGCGAAGTACCAGAAAGTAGAGAGGGTCCGCCTTCAGTTAGCTTAAGTTCGCCACCTAGGGATCGGGATTCTTCTGCAACACCACGTTTGAATTATACTAAATTGAGAAGACAGCATCATCCGAGATACAAAAGGCCCAGATTTGAGGCCAGGTCTGATTCGaggatatttgaaaaatataaagaggAAGAAACCGAGGGATTTTGTCGAGACGATAAAGAGAATCACAGGGAGTGGCAGACTGAAGATGAGGAGTTCGGTGAGCCTACAGTAGTTTTAGAATCGAGACAGAAGGACTTAAACAACGGTAACACAAACAACAATAACGGTGAGATGTTTTGTCACACAGGAATGGGACATTACGGTCATCATACGGATCCAGGAGACGTTGATTTACCACCCGAAACTCAACCCACACCTCCAAGCGCTACTCTTGTTGGTACAACAGTAACGCATTTGAGAGACCCCGACCACCAGTCGACAGAAATACAAAATTGTGACagtgttaaaataaaatttgagacACTGCACACGATGGACTCGACGGACACAATAGATATAGATAGTCATATGTCAGATCGAGCTAGCGTCAGTTCAAAAACAACAGGAGATAATGACAACATGATGATGATCACTCCAGAACTACTCGGCCTCATGCCGTCCGGCAGTTCCGGACATTCTGACGCTGGAGACAACGGGAGATCACATTCGGGACAAATCGGTTCTCACCACCATGGATCTAAATCTTGGACCCAGGACGACATGGACGCAGCTCTGGATGCCTTAAGAAATCATGATATGAGTCTCACCAAGGCCTCGGCGACGTTTGGAATACCATCAACAACTTTGTGGCAGCGAGCTCATCGCCTGGGTATTGATACTCCTAAAAAGGATGGACCGACAAAGTCCTGGAGTGACGAGAGTCTGAACAATGCTTTAGAAGCTCTTAGAACTGGTACAATTTCTGCAAATAAAGCATCCAAAGCCTTTGGCATACCTTCCAGTACGTTATATAAAATTGCAAGAAGAGAAGGGATCAGATTAGCTGCGCCTTTTAATGCCAGTCCAACCACTTGGTCACCTGCCGATCTTGACAGAGCTTTAGAAGCCATTAGATCGGGACAAACTTCTGTACAACGAGCTTCTACGGAATTTGGTATACCTACAGGAACACTTTACGGAAGATGTAAAAGAGAGGGAATCGAATTGAGCAGGAGTAATCCTACTCCGTGGAGTGAAGATGCTATGACCGAAGCTTTAGAAGCAGTCAGaaTGGGTCATATGAGCATCAATCAGGCTGCGATACATTATAACCTACCCTATTCCTCGTTATATGGTAGATTTAAAAGAGGTAAATACGAAGAACCAGTAGGAAATGAAATGTCTCAGGACAGCAGCAGTCTTCATTATCACAGCCCGAACCAAAACCACTCTTCTTCTGTTCCCGATCAAATGCCCTATCAGGGTAGCTGA
- Protein Sequence
- MLQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPRDRDSSATPRLNYTKLRRQHHPRYKRPRFEARSDSRIFEKYKEEETEGFCRDDKENHREWQTEDEEFGEPTVVLESRQKDLNNGNTNNNNGEMFCHTGMGHYGHHTDPGDVDLPPETQPTPPSATLVGTTVTHLRDPDHQSTEIQNCDSVKIKFETLHTMDSTDTIDIDSHMSDRASVSSKTTGDNDNMMMITPELLGLMPSGSSGHSDAGDNGRSHSGQIGSHHHGSKSWTQDDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRMGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVGNEMSQDSSSLHYHSPNQNHSSSVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01413017;
- 80% Identity
- -