Mcin009990.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Macrocentrus cingulum
Gene Symbol
tfip11
Assembly
GCA_002156465.1
Location
MVJL01010889.1:8483-11396[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-96 3.2e-92 309.1 14.1 1 275 378 645 378 645 0.98
2 2 0.0029 28 4.3 0.0 155 190 655 689 649 702 0.83

Sequence Information

Coding Sequence
ATGTCAGACGACGAAGCGGAGGATTTGTTCTTCATGAATCGTCCACGGAGAAAATTCACAAAGGAGCAACAAATGCTcggCATGTGGGCGGATGACAGTGACGACGAGGACGAACGTCCAGGTCGTTCATCTGCAAGGTCGTTCCCAAAACGCCCAAAAAACTACACGGCCCCGGTGAACTTTGTCGCAGGAGGTGTCCAACAAGCGGGAAAAccagcagaagaaaaaaaatccgaagaCGCCGAGGACGATGAAGACAATTGCGAGGTTCCAAACACGTCCAGCGAATCTGAAGATGATTCACGAGCCTCTACTAAGCCCTCCTTCTCGATTAATCTGGATGGGGACATCGCCGGTTTGCGGAAAAAACGTGCGCCAGTGAATCCAGCACTCATGAAAACAGGTGTGGGCAATTGGGAGGTTCACACGAAAGGAATCGGAGCAAAACTTCTGCTGCAAATGGGCTTTGAGCCGGGTAAAGGGTTGGGAAAAAAGCTGCAGGGCATCAACACCCCGGTGGAGGCTCACCTGCGCCGCGGGCGAGGTGCGATCGGTGCGTACGGGCCGGAGAAGGGCGCGAAACTCGTGGAGAAAAAGGACGAAGATGCGGttgaagaaaaagaatttaaagcCAAACTTTCTCACTGGCGCAAGACTGACAGCGGCGGCGCCGCTCGCAAGCGAACAAAATATCAGTATCGAAGCGTGAACCAAGTCCTCGAGGACGGAAAACTCCGTCCGAACATCAAAGCACCGTCTGGCAGTGAAATGAGTCGAGTAAAGGTGATCGATATGACGGGTCCGGAGCAGCGAGTCCTCAGCGGTTACCACGCGATCGCCGGTGGACAGAAGCGTCCGGACGACTCAATCCCCGAACCGGACAAAAAATCCCTCACAAACTTCTCTCTGCCCGAGTTGCAACACAATTTAAACCTGCTCGTCGAAATGTGCGAAAACGAGATCATCCAGAACGACCGGCGTACGCGCTACCTGGGTGACCGTATTGTCGCGCTTGAGGCGGAAAATAAGAGCCTAACAAAAATTGTAAGCCAGCACGGTAAGCTCGTGGACACGCTGCAGAGCGTGATGACAATTGTCGACCGTTTGATGGACAAAAAGGAGGAAATGTCGCTCTCGGAGACGGCCCAAGCCTTTAAACAAATGCAGGAAAATTTCTACGAGGAGTACAAAATGTACGAATTGGGCGAGCTCGCGGCCACGCTTGTCGCGCCCAaggttaaaaaatacttgtcgACCTGGAACCCACTGTCGGAGCCGTGCACGCCGCTGCCGCTCTTCCAGGAGTGGAAAAACATCCTTGAGACGGGCTCGAGTGTGCTTGCATCGCGAAATTTCCACCCGTACGATCAGCTAGTGTGGACAGCACTGATGCCGTCGATGCGAGGTGCAGTGCAGGAGTGGACCTGCCGCACGCCGGACCCGTTGACGGAGCTCATCGAGCACTGGAAGCCCCTGCTGCCCGCGTGGGTACTCGCCAATGTCCTCGATTTACTCGTACTGCCAAAGCTCACACTCGAGGTGGAGGAATGGAATCCCGTTACGGACATTGTACCAATTCACACGTGGATTCACCCCTGGCTGCCAATAATGGGTGGACGCATGGACACACTGATTTACCCGATTATCCGGCGAAAACTCGGCTCAGCACTCAGCCGCTGGCACCCCTCAGACAGCTCTGTGCGCAGGATGCTCGAGTCGTGGGCGCAGGTCTTCTCCAAGGGCGATTTGGAGGCGTTTTTGGTGAAGAATATCGTGCCAAAATTAGAAATTGTCCTCTCAGAGTTTGTCATCAATCCGCACCAGCAGCACCTGGACCAGTGGAACTGGGTGTACGAGTGGCACACTCTGCTGCCTGCTCACACTATGGTCGGACTtcttgacaaatttttcttcccgAAATGGCTGCAAGTTCTCGCGCTCTGGCTCAACCACTCGCCCAACTATGATCAAATCACGCAGTGGTACATGGGCTGGAAGAAGATGCTGAGCGAAAAACTCCAGGCCGAGCCGATTATCAAGGAGCACTTTAAAAAAGCCCTGGATATGATGAATCGTGCTGTTGCCGGTCCGCAGGGTCTTCAGCCCGGTGCTGCCGAGCAGGTCTCGTATTTAACGAGTTTAGAACGCTCTGCACCTCAAGCTCCACCGACAATTCAGCCGCGGATTGAGcgtCTGGCAGAAGCTGTTCGCACTGCTTCGCAGATTCCGCAGTGTTTTAAAGATCTTGTGCAGAAAAAATGCGAGGAGAGGGGAATTCTTTTCATGCCAATTGGCAATCGATACCGAGAGGCGAAACAAGTGTATAAAATTGGCAATGTTCAGGCCTATATAGACGGAAATGTTCTGTTTGTTTGtcaaaaatcgacaaattgGGTTCCAACACATCTCAATGCTCTGCTTGACATGGCCGAgctgtaa
Protein Sequence
MSDDEAEDLFFMNRPRRKFTKEQQMLGMWADDSDDEDERPGRSSARSFPKRPKNYTAPVNFVAGGVQQAGKPAEEKKSEDAEDDEDNCEVPNTSSESEDDSRASTKPSFSINLDGDIAGLRKKRAPVNPALMKTGVGNWEVHTKGIGAKLLLQMGFEPGKGLGKKLQGINTPVEAHLRRGRGAIGAYGPEKGAKLVEKKDEDAVEEKEFKAKLSHWRKTDSGGAARKRTKYQYRSVNQVLEDGKLRPNIKAPSGSEMSRVKVIDMTGPEQRVLSGYHAIAGGQKRPDDSIPEPDKKSLTNFSLPELQHNLNLLVEMCENEIIQNDRRTRYLGDRIVALEAENKSLTKIVSQHGKLVDTLQSVMTIVDRLMDKKEEMSLSETAQAFKQMQENFYEEYKMYELGELAATLVAPKVKKYLSTWNPLSEPCTPLPLFQEWKNILETGSSVLASRNFHPYDQLVWTALMPSMRGAVQEWTCRTPDPLTELIEHWKPLLPAWVLANVLDLLVLPKLTLEVEEWNPVTDIVPIHTWIHPWLPIMGGRMDTLIYPIIRRKLGSALSRWHPSDSSVRRMLESWAQVFSKGDLEAFLVKNIVPKLEIVLSEFVINPHQQHLDQWNWVYEWHTLLPAHTMVGLLDKFFFPKWLQVLALWLNHSPNYDQITQWYMGWKKMLSEKLQAEPIIKEHFKKALDMMNRAVAGPQGLQPGAAEQVSYLTSLERSAPQAPPTIQPRIERLAEAVRTASQIPQCFKDLVQKKCEERGILFMPIGNRYREAKQVYKIGNVQAYIDGNVLFVCQKSTNWVPTHLNALLDMAEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00687170;
90% Identity
-
80% Identity
-