Mcin001318.1
Basic Information
- Insect
- Macrocentrus cingulum
- Gene Symbol
- bab2
- Assembly
- GCA_002156465.1
- Location
- MVJL01003837.1:1498-19314[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-12 1.3e-09 37.7 0.0 1 39 370 409 370 413 0.90 2 4 4.7e-12 4.1e-09 36.1 0.1 2 39 425 462 424 465 0.94 3 4 1.7e-18 1.5e-15 56.7 0.0 2 45 480 524 479 524 0.97 4 4 1.9e-18 1.7e-15 56.5 0.1 1 42 531 573 531 574 0.97
Sequence Information
- Coding Sequence
- ATGGTAAGCGGAGGGATGGCAGGGCAGCACTACTGCCTGCGCTGGAACAATTATCAGTCCAACATGACATCTGTATTTCATCAGCTGTTGGAGACAGAGGCATTTGTGGATGTCACCCTGGCGTGCAATGAGGCGTCATTAAAAGCGCATAAGGTTGTGCTGTCGGCCTGCAGTTCATACTTCAAAAAGCTCCTTCTCTCCAACCCGTGCAATCACCCAACAATTATAATGCCACAGGATGTGTGTTTCAACGacctgaaatttattattgaatttgtaTACAAGGGCGAGATCGACGTGTCACAAGCGGAACTGCAGTCGCTACTGAAGACCGCTGATCAACTGAAAATCAAGGGGCTTTGCGAGGTGCCAGAACGTAAAGAAGCAACGGTGATACTGAATTCACCGTCAAGGGAGGCAAACGCAACGAGATTCAACTATACCAAGCTAAAACGACATCCCAAGTACAAGCGGCAGAGGACGACATTCGAGGCGGATTCTCAGTATTACGAAACATACAAAGAAGAAGAAATCGACGGGAGCAGTGAGTTTAGCCGTGAAATTGACAGCAAAGAGAATCACCAGGGTGAGTGGCAGACAGAGGATGAGGAGTGTGGAGAGTCTGCAGTAGTCCTGGAATCCTGCCAACAAGACAGCAACAACGGTAACCCAACGAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCACTACGGTCACCATCCGGATCCTGCGGAGGTTGACCTACCACCAGAAACACAGCCAACACCACCTAGTGCAACGTTGGTTGGTACTACGATCACCCACCTGCGGGATGCGGATCACCCAGCAGatattcaaAATTGCGATAGTGTGAAAATCAAGTTTGAAACACTTCATACAATGGATTCGACCGATACAATCGATATAGACAGTCACATGTCGGATCATGCGAGCGTGAGTTCAAAACATGCTGGCGAGGGTGACaatatgatgatgataacGCCTGAGCTACTGGGACTTATGCCTTCAGGGAGCTCTGTGCACTCGGATTCAGGGGAAAATAATGCTCGAGTGCACTCGGCAAGCGCGGGGCATCACCACGGGTCAAAGTCGTGGACACAGGAGGACATGGATGCTGCTCTGGAGGCTCTCAGAAATCACGATATGAGTTTGACAAAGGCATCAGCGACTTTTGGAATACCCTCGACGACACTTTGGCAACGTGCGCATCGATTAGGCATCGACACCCCAAAGAAAGATGGCCCAACCAAGTCTTGGAGCGACGAGAGTCTGAATAACGCTCTGGAGGCGCTGAGAACCGGCACAATTTCCGCGAATAAAGCATCTAAAGCTTTTGGCATACCCTCGAGCACACTGTACAAGATCGCGAGGAGAGAGGGCATTCGATTGGCAGCACCTTTTAATGCCAGTCCCACCACGTGGTCGCCGGCGGATCTTGACAGAGCACTCGAAGCAATCAGGTCTGGGCAGACCTCGGTGCAGCGAGCGTCCACCGAGTTCGGTATTCCTACGGGGACGCTGTATGGTCGCTGCAAACGAGAGGGTATTGAACTCAGTAGGAGTAACCCAACGCCTTGGAGTGAGGATGCGATGACTGAAGCACTCGAAGCCGTCAGGTTGGGTCATATGAGCATTAATCAAGCGGCAATTCACTACAATCTTCCGTATTCATCGCTCTATGGGCGGTTTAAACGCGGAAAATATGAAGAACCGACTGTTAATGAAATGTCACAAGATGGACACTTTCATCAGAGTCCACATCAAAATCATTCATCACCAATTCCTGACCAAATGCCTTATCAGGGTAGCTGA
- Protein Sequence
- MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLETEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCNHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPERKEATVILNSPSREANATRFNYTKLKRHPKYKRQRTTFEADSQYYETYKEEEIDGSSEFSREIDSKENHQGEWQTEDEECGESAVVLESCQQDSNNGNPTNNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDADHPADIQNCDSVKIKFETLHTMDSTDTIDIDSHMSDHASVSSKHAGEGDNMMMITPELLGLMPSGSSVHSDSGENNARVHSASAGHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPTVNEMSQDGHFHQSPHQNHSSPIPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00938124;
- 80% Identity
- iTF_00938124;