Mrus031359.1
Basic Information
- Insect
- Machimus rusticus
- Gene Symbol
- -
- Assembly
- GCA_951509405.1
- Location
- OX608053.1:10435638-10436288[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-09 3e-06 28.1 0.0 3 36 17 50 15 59 0.87 2 2 9.8 9.6e+03 -2.4 0.0 17 23 149 155 147 156 0.84
Sequence Information
- Coding Sequence
- ATGGTGaataattacaaaagaaaatccaATCGGAATTCTTGGGATGAATCCAGCATGAAAAATGCAATTGAGAAAGTAGTTGCTGGAGAAATGGGCCTCAATAAGGCTTCTATTCAGTTCCTGGTACCAAAGACTACTTTGAAGAGAAAACTGGAAAAATATAAGTCTACGCAAAATATTGATGAAGCCACAAAGAAGAAACTGGGTAGATTTGAACAAGTTTTTACTAAGGTTCAAGAGACTGAATTAGCTACTTATGTAAAACAGATGGAAAGTCGTTTATTTGGATTAACCACGAAAAATCTACAAAAGTTGGCTTATGATCTAGCGGAGAGAAATAACATAAAGCATAGTTTTGATACTAGCAAAAAGATGGCAGGTAGAATTTGGTTAGAAAACTTCTTAAAGCGTAATCCAGACCTTAGCTTACGCAAACCTGAACCAACTTCTGTAGCCCGAGCAGCCGGCTTCAATCAAGTTGCAGTTAATagtttttttgatttgctGACTCATGCAATTGAAACCTATCACCTGACTccagaaaaaatctttaatgtaGATGAGACTGGAATCACAACAGTGCCCAAGTGtataccaaaaattattggaaCAAAAGGGAAAAAACAAATCGGCTTATTAACCTCCGCTTAG
- Protein Sequence
- MVNNYKRKSNRNSWDESSMKNAIEKVVAGEMGLNKASIQFLVPKTTLKRKLEKYKSTQNIDEATKKKLGRFEQVFTKVQETELATYVKQMESRLFGLTTKNLQKLAYDLAERNNIKHSFDTSKKMAGRIWLENFLKRNPDLSLRKPEPTSVARAAGFNQVAVNSFFDLLTHAIETYHLTPEKIFNVDETGITTVPKCIPKIIGTKGKKQIGLLTSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338620;
- 90% Identity
- iTF_00709157;
- 80% Identity
- -