Basic Information

Insect: Machimus atricapillus
Gene Symbol: -
Assembly: GCA_933228755.1
Location: CAKOFS010000151.1:502441-505673[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.2 9.6e+02 1.6 5.5 1 23 281 303 281 304 0.93

2 11 0.032 5.8 8.5 0.8 1 21 308 328 308 332 0.88

3 11 0.047 8.7 8.0 0.7 1 23 474 497 474 497 0.97

4 11 7.7e-06 0.0014 19.9 1.8 1 23 503 525 503 525 0.96

5 11 9.4e-05 0.017 16.5 2.2 1 23 531 553 531 553 0.96

6 11 0.00012 0.021 16.2 5.6 1 23 559 581 559 581 0.98

7 11 2.4e-07 4.4e-05 24.7 0.6 1 23 587 609 587 609 0.99

8 11 0.00012 0.022 16.2 4.5 1 23 615 637 615 637 0.98

9 11 0.001 0.18 13.3 1.3 2 23 644 665 643 665 0.97

10 11 8.9e-05 0.016 16.6 0.3 1 23 671 693 671 693 0.98

11 11 1.4e-07 2.6e-05 25.4 1.6 3 23 701 721 699 721 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.2	9.6e+02	1.6	5.5	1	23	281	303	281	304	0.93
2	11	0.032	5.8	8.5	0.8	1	21	308	328	308	332	0.88
3	11	0.047	8.7	8.0	0.7	1	23	474	497	474	497	0.97
4	11	7.7e-06	0.0014	19.9	1.8	1	23	503	525	503	525	0.96
5	11	9.4e-05	0.017	16.5	2.2	1	23	531	553	531	553	0.96
6	11	0.00012	0.021	16.2	5.6	1	23	559	581	559	581	0.98
7	11	2.4e-07	4.4e-05	24.7	0.6	1	23	587	609	587	609	0.99
8	11	0.00012	0.022	16.2	4.5	1	23	615	637	615	637	0.98
9	11	0.001	0.18	13.3	1.3	2	23	644	665	643	665	0.97
10	11	8.9e-05	0.016	16.6	0.3	1	23	671	693	671	693	0.98
11	11	1.4e-07	2.6e-05	25.4	1.6	3	23	701	721	699	721	0.98

Sequence Information

Coding Sequence: ATGTCGGTCACCGGGGATTATTTAGTTTCTCTGTACGATTCTAAAATTTGTCGTTTATGTGGTGAACAAAATACAAGTGGTTATCCGCTGTTCGACGACGAGGACGAGGAAGACCACCTGAGCCAGAAGATAAACACCTACCTGCCGCTGCGAATATCCGATGACGGGGTATTCCCCCGCTGGATATGCCCAGGTTGTCATCTCCAGGTTGAATCGACTGTGCAGTTCTTCACTTTGATCCTAGCTGGACAGGATGTACTGCGAATGCTCCACAAGGATTGGCAGCAAAGGTGTAGTGGTCTGGCGCTGGAAAGCACTTCTTCTTCAGTGGAAGATTCGGCGGAGAAAAAGGAGGTCATCCCCATCATCTTCGAAATACCCGAATTCCTTTATCCCAGTGATCACGAGCTGCTTCAAACATCCACTCCGGCCAAGCGCAAGCGTGGTCGACCCCGAAAATCGGAAAAACAAAAGCTTGAGAATGTTCCAATCCCTGCTAAAAGTCCTGTTGAATTCGAAAATGATCTAAGTGCATCAAATTCTACCTCGAGCGGAAGACAGAGGAGGCGAATAAAAGTCCCTTCTCGCTACCAAGAATCGGTGAAAGGGTCCGAACTAGAACGAGTTTACGCGGACATGGGCTTGGCGGAAAAGAGCAGCGGCATTGATTCCCTGATACATTCCATGGACGGCGCCAAAGACCCCAAAGCAAGTACTTCAGAACAACTAATTGGCCACGTAGAAGACGACAAAGGCGTTAACTTGGGTGATCTTATAGTCGTTAAGCTCGATGGAAAGGGCAAGCGGCAGAAAAGCAACGCCCACAAGACCAAAACACGTTTTATGTGTGACATCTGCAAGGTCTGCTTTTGGCAAGAGCAAAAATTCCTTCAGCACCGATTCTCGCACCATTCAGTGTCCTTTGAGTGCATCCAATGCCTAAAAAGCTTCAAAGACAGAAAATTTCTGATTCAGCATCAGTTGGAGGAGTCGCACTCTGGAGAAGGACTTATAGAGGATCCTGATCCCAAAATCGATGATTGTGATAGCAAGCAACAGCGCGAGCATATTAATGTTAGTAATAAAACTATTGAATTTCAAAACTTGAACTCGCAAAATACTATTATTAACTTAGAAGATTTGACCCAAATAGATGAAATGGGGAATATGGTAAAAGTACATTTTAAGATAAATCACAACGAAGATTCTAAACAGAGGACGTCCCCCTCGCAATATTCTACAACACAGTCACAAAACACCCTCTTATTGAGCACAATTGACAATGATAACTGTTTGGAAATCACCCAGAACGAACTAAACTTGGAAAATTCACAGAACGAACTAAACCTGGAAAACACAGAGAACGAAAAAAAACTAGAAAACACTCACAGTGAACTTAACTTGGAAAATTTGGAGAAGTTCACCTGTAAGCAGTGCAAGGCGGAGTTCGTGGAATTCGCTGCTTACATCGACCACAAAAAAACTAACCACGTCGCAGGACGACGGTTCATTTGCAGCCAGTGCAAGAGAAGTTTTAACACTAAAACGCTTCTTCAGAGGCACCAGGTGGTCCACTCGGAACAGAGACCCCACATTTGCACCATTTGCTCAGCAGCCTTTAAGACCAAGACGAACTTAATTAATCACCGGACGAAGCACAATAACCAGAAAAGATTTTCTTGCAAAATATGCGAGCAGAAATTCGTTCACAAGCATAGCCTTAAACTTCACTTGCGTCTTCACAGTGGATCTAAGCCATTCAAGTGCACGCAAtgcggcaaagggtttaaccagctcggaaatatgcaggagcatatgcgtgtccatacaggagagcgacccttccagtgctcgatctgcccgaagaggttcaagacaagttcgcagtgccgcattcacgtaaaaaggcacgaagtagaccgacctctgaagtgctctaagtgcgaaaagtccttcctgagcacggaggatttgaaggtgcacgagcggcggcacgataacataaagccgttcaagtgcgatcagtgcgagaaggccttcattgacatgcccgccctgaggaagcacagccgcctgcacaccggcgagaagcccttcggctgcccaacgtgcggcaagcacttcgcagacaagtcgaatctgatcaagcaccagaagatgcaccagaacaagatgaagaacaaCAACTTGCTGTTTAAGCAGGTCGAGCAAGGGTCCAACAGCGGTCTTGCAAACTCGGTGGCTGGCCTCACCATCAACTCCGACGACACGAAGAGCTTGATTATTTCTGATTTGAACACGACAGGGGATGAGAGCGTGTGGCACGTGATCGACGACTGCATAAAGAACCCTGCAAAACTAGACGAAAATGAACCGTTGATCAAAATGGACGACAGCGCCACCACAAAGCAAGTTGTCTACGTCACTTACCAGGATCCTGATAATCCTGTTGATAATAAAACTACTCTCTACGTCGTAGAGTAG
Protein Sequence: MSVTGDYLVSLYDSKICRLCGEQNTSGYPLFDDEDEEDHLSQKINTYLPLRISDDGVFPRWICPGCHLQVESTVQFFTLILAGQDVLRMLHKDWQQRCSGLALESTSSSVEDSAEKKEVIPIIFEIPEFLYPSDHELLQTSTPAKRKRGRPRKSEKQKLENVPIPAKSPVEFENDLSASNSTSSGRQRRRIKVPSRYQESVKGSELERVYADMGLAEKSSGIDSLIHSMDGAKDPKASTSEQLIGHVEDDKGVNLGDLIVVKLDGKGKRQKSNAHKTKTRFMCDICKVCFWQEQKFLQHRFSHHSVSFECIQCLKSFKDRKFLIQHQLEESHSGEGLIEDPDPKIDDCDSKQQREHINVSNKTIEFQNLNSQNTIINLEDLTQIDEMGNMVKVHFKINHNEDSKQRTSPSQYSTTQSQNTLLLSTIDNDNCLEITQNELNLENSQNELNLENTENEKKLENTHSELNLENLEKFTCKQCKAEFVEFAAYIDHKKTNHVAGRRFICSQCKRSFNTKTLLQRHQVVHSEQRPHICTICSAAFKTKTNLINHRTKHNNQKRFSCKICEQKFVHKHSLKLHLRLHSGSKPFKCTQCGKGFNQLGNMQEHMRVHTGERPFQCSICPKRFKTSSQCRIHVKRHEVDRPLKCSKCEKSFLSTEDLKVHERRHDNIKPFKCDQCEKAFIDMPALRKHSRLHTGEKPFGCPTCGKHFADKSNLIKHQKMHQNKMKNNNLLFKQVEQGSNSGLANSVAGLTINSDDTKSLIISDLNTTGDESVWHVIDDCIKNPAKLDENEPLIKMDDSATTKQVVYVTYQDPDNPVDNKTTLYVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718008;
90% Identity: -
80% Identity: -