Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: -
Assembly: GCA_963920795.1
Location: OY987204.1:61435815-61439884[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 6.5 1.1e+03 1.6 5.5 1 23 280 302 280 303 0.93

2 11 0.0063 1 11.1 0.7 1 22 307 328 307 331 0.87

3 11 0.11 18 7.2 0.7 1 23 473 496 473 496 0.95

4 11 1.9e-05 0.0032 19.0 2.4 1 23 502 524 502 524 0.96

5 11 0.00018 0.03 15.9 2.3 1 23 530 552 530 552 0.95

6 11 4.2e-05 0.007 17.9 5.7 1 23 558 580 558 580 0.98

7 11 2.3e-06 0.00038 21.9 2.0 1 23 586 608 586 608 0.99

8 11 4.6e-05 0.0076 17.8 4.5 1 23 614 636 614 636 0.99

9 11 0.00045 0.074 14.7 1.5 2 23 643 664 642 664 0.97

10 11 9.7e-05 0.016 16.8 0.5 1 23 670 692 670 692 0.98

11 11 2.4e-07 4e-05 24.9 2.5 1 23 698 720 698 720 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	6.5	1.1e+03	1.6	5.5	1	23	280	302	280	303	0.93
2	11	0.0063	1	11.1	0.7	1	22	307	328	307	331	0.87
3	11	0.11	18	7.2	0.7	1	23	473	496	473	496	0.95
4	11	1.9e-05	0.0032	19.0	2.4	1	23	502	524	502	524	0.96
5	11	0.00018	0.03	15.9	2.3	1	23	530	552	530	552	0.95
6	11	4.2e-05	0.007	17.9	5.7	1	23	558	580	558	580	0.98
7	11	2.3e-06	0.00038	21.9	2.0	1	23	586	608	586	608	0.99
8	11	4.6e-05	0.0076	17.8	4.5	1	23	614	636	614	636	0.99
9	11	0.00045	0.074	14.7	1.5	2	23	643	664	642	664	0.97
10	11	9.7e-05	0.016	16.8	0.5	1	23	670	692	670	692	0.98
11	11	2.4e-07	4e-05	24.9	2.5	1	23	698	720	698	720	0.98

Sequence Information

Coding Sequence: ATGTCTGTCACCGAAGATTATTTAGTTTCTCTGTACGATTCCAAAATTTGCCGTTTATGTGGTGAACAAAATCCAAATGGATATCCGCTGTACGCCGGCGAGGACGCGGAAGGTCACTTGAGCCAGAAGATCAACACCTACCTGCCGCTGCGAATATCCGATGACGGGATATTTCCCCGCTGGATATGCCCAGGTTGCCATCTCCAGGTCGAATCGACTGTGCAGTTTTTCACTTTGATCCTAGCCGGTCAAGATATACTGCGAATGCTCCACAAGGAGTGCCAGCAAAAGTGTAGTGGTCTGACAAGCATTTCTCCTTCAGTGGATGATCCAGCGGAGAAAAATGACGAGGTCATCCCCATCATCTTCGAAATACCCGAATTCCTCTATCCCAGCGATCACGAGCTGCTTCAAACACCCACTCCAGTTAAGCGCAAGCGTGGTCGACCCCGAAAATCGGAAAAGAACAAGCTTGAAAATGTTCCTACCCCTGCCGAAAGTCCTGTTGGAGTCGAAAACGGTCAGGGTCCATCAAAACCTACTTCAAACGGGAGACAGAAAAGgcgaataaaaattccttctcGCTATCAAGAGTCGGTGAAAGGGTCCGAACTAGAACGAGTCTACGCGGACATGGGCCTAGCAGAAAAGAGCGGCGGCCTTGATTCTCTGATACATTCCACGGACGGCGCCAAAGAGCCCAAAGCAAATGCTTCAGAACAACTAATTGGCCACGTCGAAGACGACAAAGGCGTTAATCTGGGTGATCTTATAGTCGTTAAGCTCGATGGAAAGAGCAAGCGACAGAAAAATAACGCCCACAAGACCAAAACACGTTTTATGTGTGACATCTGCAAGGTCTGCTTCTGGCAAGAGCAAAAATTCCTCCAGCACCGATTCTCGCACCATTCAGTGTCCTTCGAATGTATCCAATGCCTGAAAAGCTTCAAAGACAGAAAATATCTGATCCAGCATCAATTGGTAGAGTCGCACTCTGGAGAAGGTCTCATTGAAGATCCTGATCCAAAGATCACGGATTGTGATCTCAAGCAACAGCTCGAGGATTTCAACGATAGTAAACCTATTGTTGAATTTCACGATTTGACCTCGGAAAATTCTATTATTAACTTGGGAGATCTGAGCCAAATAGATGAAATGGGGAATATGGTAAAAGTACATTTAAAGATAAATCATAGCGAAGACTCTAAACAGGGGACGTCTACCTCTCAATATTCTACAACACAACCACAAAGCGCCATTCTTTTGAGCACAATTGGCGATGATAACTGTTTGGAAAACACTGAGAATGaactaaaattggaaaattcacAGAACGAACTAAACCTGGAAAACACTCAGAACGAAATAAATCTAGAAAACACTCACAATGAACTAaacttggaaaattttgaaaagttcacCTGCAAGCAGTGCAAGATGGAGTTCGTGGAATTCGCTGCTTACATCGACCACAAAAAGAACGACCACAACATAGGACGACGGTTCATTTGCAGCAAGTGCAAGAGACGTTTTAACACCAAAACACTCCTTCAGAGGCACCAGGTGGTCCACTCGGAACAGAGACCCCACATTTGCACCATTTGCTCAGCAACCTTTAAGACCAAGACGAACTTAGTCAACCACCGGGTGAAGCACAGTaaccagaaaaaattttcttgcaaaatatGCGACCAGAAATTCGTTCACAAGCATAGCCTTAAACTTCACTTGCGTCTTCACAGTGGATCTAAGCCGTTCAAGTGCACGCAATGCGGCAAAGGGTTTAACCAGCATGGAAACATGCAGGAGCATTTGCGTGTTCACACAGGAGAGCGGCCCTTCCAGTGCTCAATCTGCCCGAAGAGGTTCAAGACAAGTTCGCAGTGTCGCATTCACATAAAAAGGCACGAAGTAATCCGACCTCTGAAGTGCTCCAAATGCGAAAAGACCTTCCTGAGCAGGGAGGATCTGAAGGTGCACGAGCGGAGGCACGATAACATAAAGCCGTTCAAGTGCGGCCAGTGCGAGAAGTCCTTCATTGACATGCCCGCCCTGAGGAAGCACAGCCGCCTGCACACCGGCGAGAAGCCCTTCAGCTGCCTAGTGTGCGGCAAGCACTTCGCGGATAGGTCGAATTTGAATAAACACCAAAAGATGCACGAGAACAAGACGAAAAACAACGACTTGCTACTTAGCCAGGACGACCAAGGGTCCAATGACGGTGTTGCTAAATTGGTGGCTGACCTCACCGCCAGCTCCTTCGACGCAAAGAGCTTGATTTTGTGCGATGTGAACACGACGGGGGATGAGAGCGTTTGGAACGTTATTGACGACTGCATAAAGAACCCTTCAAAACTGGACGAAAACGAACCTTTGATCAAGACGGACGACATCGCAGCCACAAAGCAAGTTGTCTACGTCACTTACCAGGATCCTAATAACCCGGTTGATAATAAAACTACTCTCTATGTCGTAGAGTAG
Protein Sequence: MSVTEDYLVSLYDSKICRLCGEQNPNGYPLYAGEDAEGHLSQKINTYLPLRISDDGIFPRWICPGCHLQVESTVQFFTLILAGQDILRMLHKECQQKCSGLTSISPSVDDPAEKNDEVIPIIFEIPEFLYPSDHELLQTPTPVKRKRGRPRKSEKNKLENVPTPAESPVGVENGQGPSKPTSNGRQKRRIKIPSRYQESVKGSELERVYADMGLAEKSGGLDSLIHSTDGAKEPKANASEQLIGHVEDDKGVNLGDLIVVKLDGKSKRQKNNAHKTKTRFMCDICKVCFWQEQKFLQHRFSHHSVSFECIQCLKSFKDRKYLIQHQLVESHSGEGLIEDPDPKITDCDLKQQLEDFNDSKPIVEFHDLTSENSIINLGDLSQIDEMGNMVKVHLKINHSEDSKQGTSTSQYSTTQPQSAILLSTIGDDNCLENTENELKLENSQNELNLENTQNEINLENTHNELNLENFEKFTCKQCKMEFVEFAAYIDHKKNDHNIGRRFICSKCKRRFNTKTLLQRHQVVHSEQRPHICTICSATFKTKTNLVNHRVKHSNQKKFSCKICDQKFVHKHSLKLHLRLHSGSKPFKCTQCGKGFNQHGNMQEHLRVHTGERPFQCSICPKRFKTSSQCRIHIKRHEVIRPLKCSKCEKTFLSREDLKVHERRHDNIKPFKCGQCEKSFIDMPALRKHSRLHTGEKPFSCLVCGKHFADRSNLNKHQKMHENKTKNNDLLLSQDDQGSNDGVAKLVADLTASSFDAKSLILCDVNTTGDESVWNVIDDCIKNPSKLDENEPLIKTDDIAATKQVVYVTYQDPNNPVDNKTTLYVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00936776;
90% Identity: iTF_00937530;
80% Identity: -