Matr028620.1
Basic Information
- Insect
- Machimus atricapillus
- Gene Symbol
- dl
- Assembly
- GCA_933228755.1
- Location
- CAKOFS010000224.1:436848-438377[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-72 1.2e-68 231.3 0.0 1 169 44 213 44 213 0.99 2 2 0.034 3.1e+02 2.2 0.3 61 147 364 447 358 487 0.64
Sequence Information
- Coding Sequence
- ATGGATGTCAGACAAGAGTCAGTCCTAAATAAACTCAATCAGCAGCACAACTTGCCGTCGAAGGGCCGCTTAATTACACAAAGGAAGAAGCAGGCCGCAAACTTGGCGGACGTGGGGAAGAAGGCGTTCATCCGCATCGTCGAGCAGCCCGCCAGCAAGGCGCTCAGGTTTCGGTACGAGTGCGAAGGGCGCCTCGCGGGGTCCCTTCCCGGCGCAAGTAGCACCACCGAGAATAAGACTTTTCCAGCAATCGAAATCGTGGGCTATCAAGGCCGGGCCGTGGTCGTTGCGTCTTGCGTCACGAAGGACGCCCCATACAAGCCCCACCCGCACAACCTGGTCGGGAAGGATGGGTGCAAGAAGGGCGTCTGCACGACGGAGGTAAACACGGAAACGATGCGGGCGGTGTTTAGCAACCTTGGGATCCAGTGCGTGAAAAGAAAGGACATCGACCAGTCACTGAAGCTGCGCGAGGAGATCAGAGTGGACCCATTTCGAACTGGGTTTGGGCACAAATTCAATCCAAGTAGCATAGACCTGAATGCGGTGCGGTTGTGTTTTCAGGCCTTTTTGGAAAACGAATTTGGACGGTTTACGATTCCTTTGAATCCCGTGGTGTCTGAACCCATTTACGATAAAAAAGCAATGGTGGATTTGCTCATTTGTGCTCTTTGCAGCTGCTCGAGCACGGTTGCGGGAGGTAGGGAAATTATTTTACTATGCGAAAAGGTGGTGAAAGACGACATATCAATTCGTTTTTATGAGGAAAATGATGGGCACGTGACCTGGGAAGCGTATGGTGAATTCCAACCTTCCGATATTCACAAGCAGACTGCGATTAAATTTAAGACCCCGGCCTATAAAAACCTTGATGTTGACTACTCTGTAAAGGTCAGCGTTCAATTGAAGAGGCCATCAGATGGGGCTGTGAGTGAGCCAGTGCCGTTTGAGTACCTTCCCCTTGAATCGGGCCCTATCACAATCAAGCGGAAACGACTGCAAACCGGAGGTAATCCTAATTCTTATCTCTTGAGGCATTTGCAAACGTATGCAAGACAGCAGTATGAGAAAATCGAAGATCCTCAAACTGAAACGCACCAACCAGCCCCTTTTACACTTATTTCCCAAACAGATCAAACAAAACTCAACAATCGTCTTAACCCAGACGAATATGCAGCAAATTTGGAAAATTGTCACTATAATCAGCAGCAACAGGAACTTATTAACTTTAGCCGACAACAAAGAGATCAGGCAGACTCCATTGCTGCAAAGCGAGAGACGTCAACAAACAACAATATAAATTTAAACAATTTTAACCTGCCTTACTACCAAGCGCAGACCTGGCCAACGTCGTGTAGGCAACAGCAGCAACAGCAAACAAACAATCTCAACCTTTATTCTGACCAACAGACGCAAAATTGTTACGACGCGGGTCTTAAAGAAGAGACGCCGAACAGTTTATTCGAGATGGACAGCGATCTCCTTATGAACTTTAATTCAGCTGAGTTGGAGCGTTTGACTTTATCGTGA
- Protein Sequence
- MDVRQESVLNKLNQQHNLPSKGRLITQRKKQAANLADVGKKAFIRIVEQPASKALRFRYECEGRLAGSLPGASSTTENKTFPAIEIVGYQGRAVVVASCVTKDAPYKPHPHNLVGKDGCKKGVCTTEVNTETMRAVFSNLGIQCVKRKDIDQSLKLREEIRVDPFRTGFGHKFNPSSIDLNAVRLCFQAFLENEFGRFTIPLNPVVSEPIYDKKAMVDLLICALCSCSSTVAGGREIILLCEKVVKDDISIRFYEENDGHVTWEAYGEFQPSDIHKQTAIKFKTPAYKNLDVDYSVKVSVQLKRPSDGAVSEPVPFEYLPLESGPITIKRKRLQTGGNPNSYLLRHLQTYARQQYEKIEDPQTETHQPAPFTLISQTDQTKLNNRLNPDEYAANLENCHYNQQQQELINFSRQQRDQADSIAAKRETSTNNNINLNNFNLPYYQAQTWPTSCRQQQQQQTNNLNLYSDQQTQNCYDAGLKEETPNSLFEMDSDLLMNFNSAELERLTLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627994;
- 90% Identity
- iTF_01460911;
- 80% Identity
- -