Basic Information

Gene Symbol
-
Assembly
GCA_905333045.1
Location
HG995320.1:5779195-5784541[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.1 8.3e+03 -2.3 0.0 22 31 277 293 265 297 0.69
2 6 0.21 2.9e+02 2.4 0.0 23 42 398 416 393 419 0.90
3 6 0.00054 0.74 10.6 0.7 22 45 495 517 465 518 0.88
4 6 0.29 4e+02 1.9 0.1 23 45 634 655 611 656 0.81
5 6 0.02 27 5.6 0.0 21 45 732 758 706 759 0.74
6 6 2.8e-05 0.039 14.7 0.7 22 45 873 902 853 903 0.72

Sequence Information

Coding Sequence
ATGGAACAAATTGTGGTCCAAACTGAGGTTCAGCCGGATGGAAATATCTTGTTATTTTACGTTGATGAAAACCAAGAGATTGATCCAAACATATTGGAACAGGTTGAAGATGAAAGCATTGACATACCTGAAACAAAATATATAATAGAGGATACTGCAGGAGACTCCGAGGATGAGCTTAATATTGCTCAAGCCACTGAACAGGTTCAACAGGAATCATGGCCAGATAATGAAATAACACGTCTCATTGTTTTCTATATTGACAACAAAAAAACTTTCTTAAATGGAACTACTAAAAGTAAGCACTTGTGGGCCGTTGCATGTAAAACAATGATGACACACAGAAGCCCTATCTCATGTGAGATTAAATTCAGAATGTTAAAAGGTAGGTTCATCCAGGCATATTTAGAAAAACAGAAAAATAGCAACTACCTTTGGCCATTTTATGATCTTTGCCATCAAGCGTTTTATGATGACCCAGAAGTGGTGGCTTGTATAAAAGACAACTTACAGAAACTAGTAGCATCAGAGACTAAGGTCACTGTGACTCAGATCCCTGCGACTCAGATCCATGCAACTCAGATCCCTGCGACTCAAATCCATGCGACTCAGATCCATGCGACTCAGATCCCTGCGACTCAGATCCATGCGACTCAGATCCATGCGACTCAGATCCCTGTGACTGAGATACCTGCGACTCAGATCCCTGCGACCCACACTGTTAATCAAGATGGAGTAATAATTGTTAAGAAAGTTAACAGCCAAGCCTGCGACGAGAAGGTTACAGCAATGTTGAAATTGTACATAAAATACAAAGGTAAGCTTAATAATGCAAATATCTCTAAAAGCATATGGGATACTATTGCATTGGAGATGGGGGAGGAGGATGGGAATTATTGGCACAGACGTTTTTATAATTTCAAAAAGCATTACATTACCATGCTTCACAAGAAAATGGAGACCAACGAGGAAATTAACTGGCCGTACATGAGTCTCTTTGATGAAATATTTGGTAATGACAAAGACTTCAAACGTAAATTCCAAATAATTGACATAAAGACAGAAATGGAATCGAACAATTCAATCCCAAATCCAAATATATGGTATGATACACAGAAGGTGTTTTTAGTGAAGTATCGTTTCGACTGCTTTCCTGAGTTCCAAGATCCCACAATTCCAGATGCTTTTCTATGGAATGAGATTGGAAGACTTTTAGACAAAGAGCCCAATAGCTGTCAACAGAAACTGGAAGAGTTGCAAGAAGAACACATTAAACATTTATCAAATGGGGACTATCAGTTGCTAAATCGCACAGCTCTACAAATATTGTTGGATAATGTTATAGCATTAGAAACTGAGGCTGTCCTTAGACAACAGATTTCATCTACAAATGATCCATGGAAAACTGAAGAAATAGACAATATGGTTCAATATTTTTATGATAATATGGTAATGTTCAAAGATCCTGTCTGCTACTACGTATGTTGGGTGATTATTGCAAAGAAACTAGGCAAAACTGTTGTTGTGTGTAAGAAAAAATGGAATGAACTCAAAGAATTGTACCGATCAATCTTAAATGACAAGAAAGAGAACCCAGAGATGCAGATTGACTGGCGTTATATTGATGTTTTTGATATAATCTTTGATTATGGAATGGATTTGAAGTTGCTTGATGGATATGAAACAAGCATAGATACAAACAAAGCACCGGAATCTGAAGTAAATAAAATTACTTTCAATGACAATAACAATTCAGAAGACGAAGAAACTTATGATGAAAGAGGTTTTACGAAAAATACAAAGAAACAAGCAGGAGATGAGAAGGCCTTCAAACTGCTAGAATATTACCTCAAAAATAAGGACAAATTTACATCGTCGCAGCAGAAGAAACTAGCACTATGGGAAGTTATAGGGAAACAAATAGATGTGTCAGCGACAGAATGTGCCCACAGATTTAGAAACTTCAAGCAAGTCTACACGGCATACGTACAAAGGGAGGTAAATAAACCAGAAATGCCTATTATGTGGCCATACTATTCGCTGTGTAAAAAGGTCTTTGGCTACAGAGCGATAAAGTCAAAACTGAAAAATGGTAAAACAGAAGCAGATGAGATCGAAGACTGGGCTGCGAAGGAAATCAAACAGGTCATCAATCATTTCTCTACTTTCTATAATGAGATCACAGAAAATTCCAACGATGAAACGCTCTGGTCGAGTCTCGCTGAACAAATGGGTAGGCCGGCCACCAGCCTCAGAGATAAGTTTTTGGAGTTGAGGAAATCATACAGGAAATTGAAGACTATGAAAACTCGAAACCCCGATGTGAAACTGACTTGGAAATACTTTAACATGATGGATGATATTTATAATGAAGCTGAGCAGATAAAAAATAGGGAAAAAGTAGAAATTGAAATTCCTTTTAATGTAATTGGGAAAACAGAATTACCAGATGATGATGATTACCAATGCATTATTGTGATGCCAGAAGACGAAGAAATGATCAACGATAAAACTGTTACAGATGCACAGGCAAACTCTGAAACACATAAAAAGTTTAAGTGGAACAAGAAAACTAAGAAGCAACTTTTGAGCCTGTGTTTAGACTGCCGAAAAAGAAATGTGCAGTCAAATGAGATATGGAATGAAATAGCATCAAGAATGGAAGACAAAACACCTAAAGCTTGTAAAAATATGTTTGTAAAGTTAAAAAATATCCACAAAACACAAGGAGGTAGTGTATATGACAAATTTTTAGATAAAATATTAGCACTGAAAAGGGAAAAAGTTAAAGTTGTCTGA
Protein Sequence
MEQIVVQTEVQPDGNILLFYVDENQEIDPNILEQVEDESIDIPETKYIIEDTAGDSEDELNIAQATEQVQQESWPDNEITRLIVFYIDNKKTFLNGTTKSKHLWAVACKTMMTHRSPISCEIKFRMLKGRFIQAYLEKQKNSNYLWPFYDLCHQAFYDDPEVVACIKDNLQKLVASETKVTVTQIPATQIHATQIPATQIHATQIHATQIPATQIHATQIHATQIPVTEIPATQIPATHTVNQDGVIIVKKVNSQACDEKVTAMLKLYIKYKGKLNNANISKSIWDTIALEMGEEDGNYWHRRFYNFKKHYITMLHKKMETNEEINWPYMSLFDEIFGNDKDFKRKFQIIDIKTEMESNNSIPNPNIWYDTQKVFLVKYRFDCFPEFQDPTIPDAFLWNEIGRLLDKEPNSCQQKLEELQEEHIKHLSNGDYQLLNRTALQILLDNVIALETEAVLRQQISSTNDPWKTEEIDNMVQYFYDNMVMFKDPVCYYVCWVIIAKKLGKTVVVCKKKWNELKELYRSILNDKKENPEMQIDWRYIDVFDIIFDYGMDLKLLDGYETSIDTNKAPESEVNKITFNDNNNSEDEETYDERGFTKNTKKQAGDEKAFKLLEYYLKNKDKFTSSQQKKLALWEVIGKQIDVSATECAHRFRNFKQVYTAYVQREVNKPEMPIMWPYYSLCKKVFGYRAIKSKLKNGKTEADEIEDWAAKEIKQVINHFSTFYNEITENSNDETLWSSLAEQMGRPATSLRDKFLELRKSYRKLKTMKTRNPDVKLTWKYFNMMDDIYNEAEQIKNREKVEIEIPFNVIGKTELPDDDDYQCIIVMPEDEEMINDKTVTDAQANSETHKKFKWNKKTKKQLLSLCLDCRKRNVQSNEIWNEIASRMEDKTPKACKNMFVKLKNIHKTQGGSVYDKFLDKILALKREKVKVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01248084;
80% Identity
-