Basic Information

Gene Symbol
-
Assembly
GCA_905147365.1
Location
LR990275.1:9803086-9808305[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.9 8.8e+03 -2.7 0.0 23 31 280 288 260 291 0.71
2 6 0.92 1.2e+03 0.1 0.0 23 43 391 410 387 413 0.87
3 6 0.027 34 5.1 0.3 22 45 488 510 482 511 0.92
4 6 0.052 66 4.2 0.0 23 45 627 648 603 649 0.81
5 6 0.015 20 5.8 0.0 4 45 701 751 699 752 0.73
6 6 3.7e-05 0.047 14.2 0.4 23 45 873 895 846 896 0.77

Sequence Information

Coding Sequence
ATGGAACAAATTGTGGTCCAAACTGAGGTTCAGCCGGATGGGAATATCTTGTTATTTTACGTTGATGAAAACCAAGAGATCGATCCAAACTTATTGGAACAGGTCGAAGATGAAAGCATTGACGTACCTGAAACAAAATATATAATAGAGGATACCGCAGGAGACTCCGATGATGAGCTTGATATTGCTCAAGCCACTGAACAGGTTCAACAGGAATCATGGCCAGATAATGAAATAACACGTCTCATTGTTTTCTATATTGACAACAAAAAAACGTTCTTAAATGGAACTACTAAAAGTAAGCACTTGTGGGCCGTCGCATGTAAAACAATGATGACACACAGAAGACCTATCTCATGTGAGATTAAATTCAGAATGTTAAAAGGTAGGTTCATCCAGGCATTTTTAGAAAAACAGAAAAATAGCGACTACCATTGGCCATTTTATGATCTTTGCCATCAAGCATTTTACGATGACCCAGAAGTGGTGGCTTGTATAAAAGAGAACTTACAGAAACTAGTAACATCAGAGACTAAGGTCACTGTGGCTCAGATCCCTGCGACTCAGATCCATGCCACTCAGATCCCTGTGACTCAGATCCCTGCGACTCAGATCCATATAACTCAGATCCCTGTGACTCAGATCCATGCGAATCAGATTCCTGCAACTGAGATCCCTGCGACTCCGATTCCTGCGACTCACACTGTTAATCAAGATGGTGTAATAATTGTTAAGAAAGTTAGCAGCCAAGTCAGCGACGAGAAGGTTACAGCAATGTTGAAATTGTACATAAAATATAAAGGTAAGCTTAGTAATGCAAATCTCTCTAAAAGCATATGGGATACTATTGCACTGGAGATGGGGGAGGAGGATGGGAATTATTGGCACAGACGTTTTCACAATTTCAAAAAGCATTACATTACCATGCTCTACAAGAAAATGGAGACCAATGAGGAAATTAACTGGCCATACATGAGTCTCTTTGATGAAATATTTGGTAATGACAAAGACTTCAAACGTAAATTCCAATCAATTGATATAAAGCCAGAAATGGAATCAAACAATTCAATCCCAGATATATGGTATGATACACAGAAGGTGTTTTTAGTGAAGTATCGTTTTGACTGCTTTTATGAGTTCCAAGATCCCACAATTCCAGATGCTTTTCTATGGCATGAGGTCGGAAGACTTTTAGACAAAGAGCCCAATAGCTGTCAACAGAAACTGGAACAGTTGCAAGAAGAACACATGAAACATTTATCAAATGGGGACTATCATTTGTCAAATCGCACACCTCTACAAATATTATTGGATAATGTTATAGCATTAGAAACTGAGGCTGTCATTAGAAAAAATATTGCATCTACAAATGATCCATGGAAAACTGAAGAAATAGACAATATGGTCCAACATTTCTATGATAATATGGTAATGTTCAAAGATGCTGTCTGCTACTATGTATGTTGGGTGATTGTTGCTAAGAAACTAGGCAAAACTGTTGTTGTGTGTAATAAAAAATGGAACGAACTCAAAGAATTGTACCGATCAATCTTAAATGACAAGAAAGAAAACCCAGACATGCAGATTGACTGGCGTTATATTGATGTTTTTGATATAATCTTTGATTATGGAATGGATTTGAAGTTGCTTGATGGATATGAAACAAGTGAAGATACAAACAAAGCACCTGAACCTGAAGTAAATAAAATTACTTTCAATGACGATAACAATTCAGAAGACGAAGAAACTTATGATGAAAGAGGTTTTACGAAAAACACAAAGAAACAAGCTGGAGATGAGAAGGCCTTCAAACTGCTAGAATATTACCTCAAAAACAAGGACAAATTTGCATCGTCGCAGCAGAAGAAACTAGCATTATGGGAAGTTATAGGGAAACAAATAGGTGTGTCAGCGACAGAATGTGCCCATAGATTTAGAAACTTTAAGCAAGTATATACAGCATATGTTCAAAGGGAGGTAAATAAACCAGAAATGCCTATTCTGTGGCCATACTATTCGCTGTGTAAAAAGGTATTTGGCTACAGAGTGATAAAGTCAAAACTGAAAAATGGTAAAACAGACGCAGATGAGATCGAAGACTGGGCACCGAAGGAAATCAAACAAATCATCAATCATTTCTCTAGTTTCTATAATGAGATTACAGAAAATTCCAACGATGAAACACTGTGGTCGAGTCTCGCTGAACAAATGGGTAGGCCTGCCACCAGCCTCAGATATAAGTTTTTGGAGTTGAGGAAATCTTACAGAAAATTGAAGACTATGAAAACCCGAAACCCCGATGTGAAACTGACGTGGAAATACTTTAACATGATGGATAATATTTATAATGAAGCTGAGCAGATCAAAAAAAGGGAAAAAGTAGAAATTGAAATTCCTTTTAATGTAATTGGGAAAACAGAATTACCTGATGATGATGATTACCAGTGCATCATTGTGATGCCAGAAGACGAACAAACGATCTATGATGAAACTGTTATAGATGCACAGGCAAACTCTGAAACACCTACAATGTTCAAGTGGAACAAGAACAGTAAGAAGCAACTTTTGAGCCTGTATTTAGACTGCCGAAGAAGAAATGTGCAGTCAACTGAGATATGGAACGAAATAGCATCAAGAATGGAAGACAAAACACCTAAAGCTTGTAAAAATATGTTTGTAAAGTTAAAAAATATCCACAAAACTCAAGAAAGTAGTGTTTATGGAAAACTTTTAGATAAAATATTAGCACTGAAAAAGGAAAAAGTTAATGTTGTCTGA
Protein Sequence
MEQIVVQTEVQPDGNILLFYVDENQEIDPNLLEQVEDESIDVPETKYIIEDTAGDSDDELDIAQATEQVQQESWPDNEITRLIVFYIDNKKTFLNGTTKSKHLWAVACKTMMTHRRPISCEIKFRMLKGRFIQAFLEKQKNSDYHWPFYDLCHQAFYDDPEVVACIKENLQKLVTSETKVTVAQIPATQIHATQIPVTQIPATQIHITQIPVTQIHANQIPATEIPATPIPATHTVNQDGVIIVKKVSSQVSDEKVTAMLKLYIKYKGKLSNANLSKSIWDTIALEMGEEDGNYWHRRFHNFKKHYITMLYKKMETNEEINWPYMSLFDEIFGNDKDFKRKFQSIDIKPEMESNNSIPDIWYDTQKVFLVKYRFDCFYEFQDPTIPDAFLWHEVGRLLDKEPNSCQQKLEQLQEEHMKHLSNGDYHLSNRTPLQILLDNVIALETEAVIRKNIASTNDPWKTEEIDNMVQHFYDNMVMFKDAVCYYVCWVIVAKKLGKTVVVCNKKWNELKELYRSILNDKKENPDMQIDWRYIDVFDIIFDYGMDLKLLDGYETSEDTNKAPEPEVNKITFNDDNNSEDEETYDERGFTKNTKKQAGDEKAFKLLEYYLKNKDKFASSQQKKLALWEVIGKQIGVSATECAHRFRNFKQVYTAYVQREVNKPEMPILWPYYSLCKKVFGYRVIKSKLKNGKTDADEIEDWAPKEIKQIINHFSSFYNEITENSNDETLWSSLAEQMGRPATSLRYKFLELRKSYRKLKTMKTRNPDVKLTWKYFNMMDNIYNEAEQIKKREKVEIEIPFNVIGKTELPDDDDYQCIIVMPEDEQTIYDETVIDAQANSETPTMFKWNKNSKKQLLSLYLDCRRRNVQSTEIWNEIASRMEDKTPKACKNMFVKLKNIHKTQESSVYGKLLDKILALKKEKVNVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00933708;
90% Identity
iTF_01248084;
80% Identity
-