Basic Information

Insect: Lymantria monacha
Gene Symbol: -
Assembly: GCA_905163515.1
Location: LR991095.1:1893461-1908149[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00041 0.045 15.4 1.6 1 23 362 385 362 385 0.94

2 16 0.0004 0.044 15.4 5.7 1 23 390 412 390 412 0.98

3 16 0.00068 0.074 14.7 1.3 1 23 442 465 442 465 0.96

4 16 0.0073 0.8 11.5 1.4 2 23 526 548 525 548 0.96

5 16 0.0076 0.83 11.4 2.2 1 23 554 577 554 577 0.94

6 16 0.0019 0.21 13.3 0.4 2 21 581 600 580 601 0.92

7 16 0.0096 1 11.1 0.7 1 23 609 632 609 632 0.94

8 16 0.016 1.8 10.4 0.4 2 23 673 694 672 694 0.95

9 16 0.0049 0.53 12.0 2.2 1 23 700 722 700 722 0.97

10 16 0.049 5.3 8.9 2.1 1 23 757 779 757 779 0.92

11 16 0.015 1.7 10.4 1.0 3 23 785 805 784 805 0.93

12 16 0.0021 0.23 13.2 0.4 2 23 819 841 818 841 0.96

13 16 0.00027 0.029 16.0 1.1 1 23 847 869 847 869 0.98

14 16 0.0013 0.14 13.8 5.5 2 23 876 897 875 897 0.96

15 16 4.2e-05 0.0046 18.5 1.9 1 23 903 926 903 926 0.97

16 16 0.73 80 5.2 1.8 2 23 932 954 931 954 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00041	0.045	15.4	1.6	1	23	362	385	362	385	0.94
2	16	0.0004	0.044	15.4	5.7	1	23	390	412	390	412	0.98
3	16	0.00068	0.074	14.7	1.3	1	23	442	465	442	465	0.96
4	16	0.0073	0.8	11.5	1.4	2	23	526	548	525	548	0.96
5	16	0.0076	0.83	11.4	2.2	1	23	554	577	554	577	0.94
6	16	0.0019	0.21	13.3	0.4	2	21	581	600	580	601	0.92
7	16	0.0096	1	11.1	0.7	1	23	609	632	609	632	0.94
8	16	0.016	1.8	10.4	0.4	2	23	673	694	672	694	0.95
9	16	0.0049	0.53	12.0	2.2	1	23	700	722	700	722	0.97
10	16	0.049	5.3	8.9	2.1	1	23	757	779	757	779	0.92
11	16	0.015	1.7	10.4	1.0	3	23	785	805	784	805	0.93
12	16	0.0021	0.23	13.2	0.4	2	23	819	841	818	841	0.96
13	16	0.00027	0.029	16.0	1.1	1	23	847	869	847	869	0.98
14	16	0.0013	0.14	13.8	5.5	2	23	876	897	875	897	0.96
15	16	4.2e-05	0.0046	18.5	1.9	1	23	903	926	903	926	0.97
16	16	0.73	80	5.2	1.8	2	23	932	954	931	954	0.95

Sequence Information

Coding Sequence: ATGCCCGCGTGCTCTATAAAACACTGTAGTGCCAGAAAAAACATAAATCAACCAACATTGACCGTTCATAGATTTCCTGTAAATGAAATTATGAAGAAAAAATGGATAGAAATTATAGGCATTGAAAATATAAACCCTCGACACAAAATGTGGTGTGTGTGTTCGATGCACTTTGATGAAACATCTTTCAATAGAACTCTCGATGTAACAAGATTACGTGACGGCGCAGTGCCCTTATCTTCTCTTCTGATTGCCAATAAAACTAGAGTAGATGTATTGCATCAAAGACAAAATATAGCACCATCAATCTCGCCTGAGAAGTTGGAGTTACTGgatgataatttaaataaaaatgtactaTTAGTAAATAAGgaTAAAGCCATGGAGGAGGTCTCAACAAATACtactaatgatgatgatcatgagaACTTAGAATGGTTGAAACAAAAGCTACAGGCAGTATGGTCCTCGCACAAATGTTGTGGTCTCTGTATGGAATATAAGGGAAATTTTTGTCCTGTTGATATGGAATTGGTTATAAATAAACAGAAGTTTTCTAGATGTCTAAAGGATATCCTGAACTATGTTTTTAATGATgatGTGGAGAGTCTAATGTTATGCCCTTATTTATGTGACAGTTGCACTGAAAAAACTATACAAGCATATATATTCATTCATAATAGCAAACAACTGTCACGGATCATGAACAACTGTATCGCTGATATATATTCTAAAGTTAATGATGTAAATGACCAGCTGAAATCTACAACCGATTACAATAACGCCAACCTCATGTTAGTACTAGAGAATGATACAGATCTATATAAAAGCATAATTGATACAAAGATGATAGAAATTGTACCAACCGCTATGCCTATACCAATGAAAGTAGATCCACCACAGTTAATAACTGCTATGAAAGACGAGCCAGTGATAACTGATGTGCAAACCCCCAAAAATATTGAACCATCAAAAATTGTTAACAAACCAATGAAAACTACACCAAATATAACATTGAAGAAAGGTCATATAGTTATAAAACCTTTGAGTTCAGCGAGGAATCTAACACCTATGTACAATACCTATCAATGTTCTTATTGTTCTGAAATATTCACAACATACAGATCGCTGAAAGAACATGAGAAAGCAAAGCATAAGAAATCAGTCTTCAGttgtaatttatgtaataaGACTTATAATACGcatcaatatttgaaaatacatTACAAAACTCATGAGAAGGTCAAATGTAAATTTTGTCAAATGATATTAGCTGAAGGTGAATTGATGGATCATTTGAAAGCTAATCATGCTACTTTAGTATTCCCTTGTAAATTCTGTGACCTAGTTTACTACACACAAGATTCTTTAACAACACATTTCAATAGCAGCCAtttgattaataatacaaaaattaaatctcAATGTATTATGTGTTTAGGAAATATTAAAGAGAGTAATATGAAAATGCACAAATGCAAGTTCACTTGCTCCGAATGCTTTATAATGCCGtgtatacattataaatatttaatgtctTATAGAGAACAAGTTTTGAATCATGTTAACAACGTAAAATGTATGGACTGTCACTATGTTACTGCAAGGAAGGAACATTTAATTGGACATGTTAATAGAGAGCATTTAGATCATCATCCTTTTACATGTGCAGATTGTGGTCAACAATGCTATacaaaattaagtttaaaaactCATATAGCCCAATTTCATCAAGATTTGAACTGTGAGTATTGTGATTTTGGATTTAAAGATAggaatagtttggaaaatcacAAGAAAATATGCAAATCTGTTATAAGGGCTTTCAGTTGTAATCATTGTTCTGCATCATTCGATAATGAAGAGGAATTAGGTAATCATGAAAATTTGAGACATAGCTCCAGTGTTCATGCTTGTAATTTATGCAAGAGTAAGTTTTTATCAAGTTTACAATTAGAAGAACATCGAGTAAGAGTTCATGGAGGTATCCAATGCAAGAAAAGGAGGAAGCATATTGAATGTTCTTTGTGTgatataatgtttaaaaataccAAAGAGATGATTCAACATGAAAAGTTTCACGGGCCCGATGAAACATTTCCATGTAAAGAGTGTTCCAAACAATTTAAAAGTCTAATGAAATTGTATGTACATAATCAAAAGCATTATACAAAGAGAGTGATATGTTCCCGTTGCAATAAAAAGGTGGCTGCATCATTTTATCCTCAACATGCCGTCAGATGTCCGTATAAAAATGAAGGATTGAAACATGTTTGTGAAATATGTGGCAAGGGGTTCCACTTAGACTCCTTGCTGCGCTTCCATCAAAAAATTCACATGGAACGTGAACCGTGCCCACAATGTAGCAAATGTATTAAACCATctagtttaaaaaaacacatGGAATTAGTTCACGgagaagattttaagaaaaagAGGAAACAGCCTACAGTAGAATGTGACATATGCGGTCATTTGGTTAGAAAGAAACAAGATTTGGAAGCACATATGAACAGATATCATTTGAAAATCAAGCCGTATGTctgtaatatatgtaataaagatTTTTGTGGCAAGATCCGTTTAAAGGAGCACATAGCCACTCATTCTACAAATAATGCTTGCTTTTGCTCGATTTGCGGTAAGAAATTTGCTAACCGTGTCTGCTTGAAAATGCATTTTAGGATTCACACAGGTGAATCGCCATACACTTGTGACATATGTGGCTTGAAATTCAGATCTTCCAGCATGATGAAAACTCATCGGTTGAAAAAACACTGGTCTAAGACTGTACCGTGTCCATTATGTGACAGTATGTTTTATATGACCAGGGAGATGCGACATCATTTTAAAAAGACCCACTGGAAATATAAGGATAGACCGTTTGATGTTAGGGAAGTTGAGGGATTAAGTGAAGAATTTTATTCTCTATTTGAAGATGGAAGACTGCCCAAATTGGATTCGTag
Protein Sequence: MPACSIKHCSARKNINQPTLTVHRFPVNEIMKKKWIEIIGIENINPRHKMWCVCSMHFDETSFNRTLDVTRLRDGAVPLSSLLIANKTRVDVLHQRQNIAPSISPEKLELLDDNLNKNVLLVNKDKAMEEVSTNTTNDDDHENLEWLKQKLQAVWSSHKCCGLCMEYKGNFCPVDMELVINKQKFSRCLKDILNYVFNDDVESLMLCPYLCDSCTEKTIQAYIFIHNSKQLSRIMNNCIADIYSKVNDVNDQLKSTTDYNNANLMLVLENDTDLYKSIIDTKMIEIVPTAMPIPMKVDPPQLITAMKDEPVITDVQTPKNIEPSKIVNKPMKTTPNITLKKGHIVIKPLSSARNLTPMYNTYQCSYCSEIFTTYRSLKEHEKAKHKKSVFSCNLCNKTYNTHQYLKIHYKTHEKVKCKFCQMILAEGELMDHLKANHATLVFPCKFCDLVYYTQDSLTTHFNSSHLINNTKIKSQCIMCLGNIKESNMKMHKCKFTCSECFIMPCIHYKYLMSYREQVLNHVNNVKCMDCHYVTARKEHLIGHVNREHLDHHPFTCADCGQQCYTKLSLKTHIAQFHQDLNCEYCDFGFKDRNSLENHKKICKSVIRAFSCNHCSASFDNEEELGNHENLRHSSSVHACNLCKSKFLSSLQLEEHRVRVHGGIQCKKRRKHIECSLCDIMFKNTKEMIQHEKFHGPDETFPCKECSKQFKSLMKLYVHNQKHYTKRVICSRCNKKVAASFYPQHAVRCPYKNEGLKHVCEICGKGFHLDSLLRFHQKIHMEREPCPQCSKCIKPSSLKKHMELVHGEDFKKKRKQPTVECDICGHLVRKKQDLEAHMNRYHLKIKPYVCNICNKDFCGKIRLKEHIATHSTNNACFCSICGKKFANRVCLKMHFRIHTGESPYTCDICGLKFRSSSMMKTHRLKKHWSKTVPCPLCDSMFYMTREMRHHFKKTHWKYKDRPFDVREVEGLSEEFYSLFEDGRLPKLDS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00931836;
90% Identity: iTF_00931836;
80% Identity: -