Lmon036992.2
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- -
- Assembly
- GCA_905163515.1
- Location
- LR991108.1:9844803-9847139[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.018 10 7.4 4.7 18 43 9 31 7 32 0.95 2 17 0.88 4.8e+02 2.1 0.6 17 44 36 60 32 60 0.80 3 17 0.0075 4.1 8.7 0.1 18 43 68 90 62 91 0.91 4 17 0.00046 0.25 12.6 1.5 17 44 98 122 96 122 0.94 5 17 0.013 7.2 7.9 2.5 18 44 129 152 128 152 0.93 6 17 4.1e-05 0.023 15.9 1.4 14 43 156 182 153 183 0.89 7 17 0.017 9.5 7.5 1.1 13 43 184 211 181 212 0.84 8 17 0.013 7.2 7.9 0.1 19 44 221 243 214 243 0.90 9 17 0.24 1.3e+02 3.9 0.1 17 29 255 267 246 278 0.75 10 17 0.74 4.1e+02 2.3 0.1 5 43 294 327 290 328 0.71 11 17 0.84 4.6e+02 2.1 0.0 18 27 364 373 358 387 0.79 12 17 0.043 24 6.3 2.4 13 43 404 431 398 432 0.86 13 17 0.31 1.7e+02 3.5 8.2 4 29 424 449 422 461 0.75 14 17 0.022 12 7.2 4.7 16 43 465 489 452 490 0.79 15 17 0.2 1.1e+02 4.1 0.8 17 44 495 519 491 519 0.85 16 17 1.8 9.9e+02 1.1 1.0 18 28 526 536 523 549 0.82 17 17 0.0002 0.11 13.7 1.9 18 44 622 645 606 645 0.84
Sequence Information
- Coding Sequence
- ATGTATCATAATCTACTAGACTTTGTGTGTGACTACTGTTCAAGAACGTTCACAagaaaacataatttacaaactCATATAGAAAATTGTCATATAAATTCAACTAACAAATGTAGTATTTGCAGACAAAGTTATGGCACCCCTTCTGGATTACAGCTTCATCTGTCTAGAGGACATAATAGTCGTGGCCAAGCGTTCCCTGAATGCGATCTATGCGGAAGAATCTTTACAAGAAAACAAAACATCTTATCGCATATGATTACAGTGCATTTACAAGGCTTAGGTGATGATATAAGATGTCATTTATGCGATAAAACTTTTACTACGGAAAGGAATTTGAAGAGACATATGAATCAACAGCATAATCCGAATGTTGAATATCCAACTTGTCATCATTGTGAGAGAGTTTTTAAAGCGAAACATTCTCTAATATCTCATATACAAGCTGTACACAGTAATACAGAAAGAGATGCGATTAAGTGTACTCTGTGTGATAAAGTTTATACTAATACTCGCAATATGAAACGTCATATCGAAGTATTCCATGAAAAGAAAGGTGTATACAGATGTGATATATGCCCCAAAGTGTATACATCAAATCAAAGTTTAAGGAGACATTCTCGTTCGACTCATAGTACGGAAAGTAACGAACAATATCCTTGTAATTTTtgcaacaaaattattataggcagagagaattttGATACTCATATACAATTCAATCAtcaaaatatagatatagatattaaGAATAATGATGGGATAGTTTGCGAGATATGTCATCAAGTGTATGAAGAAGAACCAGCTCTACGTCAGCATACAAAAAATGATCATACATTCaaagagttttataaatattgcagGAATgcattaataaaacaatacgGTACCGAGTTTATAGATAATGTATACAATTGTGAATATTGTCAGCATTCATTTCCAAGTGTATACGAATTGAAAGATCATATGAGAGTTAGCCATGATATAGAATATTCTCTTTCCACATGCAATGTGtgctttaataaattttatagcaaaGAAACAATGGTTGCAcataaaaaattatgcgtgccaCCACCTAATGTGAAATCGTGCAATCATTGCGATAAATTATTCACAGATATATCAAGTTTAGAATTTCATACAAGAATTTTTCATCCGCAAGCACAAATAGCTGATTCAATTATTACTTCGACTAATTTAGATGATGATACAACATCGTTTAAATGTGAACATTGtgatagaatatattatagtgACCGTTCCTTAAAACATCATGTCAAATTGAAACATACTACCGACGAACAAGTTGAGTGCGAGTATTGCAATAAAATTTGCAGTAACAAATACTATTTAGCATCACATATTAAAATCGTTCATAATAATGACTCGTGGTCACATTGCGAATATTGTAATAAGCAATTTAAATCTAAAAGAAATATAAGACGACATATAGAGTATACTCATTTAGGTATGCAAAGATATAAATGTATTGAGTGCGaaactttatttaaagagaaacgaagtttaagaaaacatgtaagaACTAAACATCCAAATTCTGCATTGTTTccacaatgtcatatttgtcataAAAGATTTGAGTCagcgaaatcttgtaaaatacatttaaagttaTTGCATTCCTTCAATATGAATACGTATCCTTGCCATCTATGTTCGGTTTCTTTTAGCTCTAATGAAGCTTTAAATATCCATTTAAATACTAAACATTTAGCTGAAGATCAAATTTATAAATGCGAAGAATGCAATTTAGTTTTTAAAGGACAAGAGAAATTTGACAGCCATAATGAAGTGCACCACGTGAATCTTATATCAAATGTGAAACAAAAAGTATTGCCACGTTGTATCCTATGCATGAAAGATTTTAGCACAAGGAAAACATTAAAAAGGCATATTAAAAAGTTTCATCCGGAATTTGAAGTGCAAGAATTGGCTAATTTCGGTTCAAGACGAAGAAACTTTAACGTTGATTGTGAGGAATGCATAAGAAATTTCAACGATGAGAATCATCGTAAAATTTATCAGAAATTAAAACATTTGAAAAAttctattattttcaaatgtgaAACGTGTGGTATTTCTTATAACTGTTTAGAATAttctatacaaaaatacaaattaagaaACGGTGATGTCGGTAATACTAAAACAATTTTAAGCGAATTGTGTACTACTGAGATGAGCGAGGAGGAGAATGAATATGCAAGTAGGACTGTTGAAGAACCAGAGAGTACTTCTGAGCTCAATATTAAAACAGAACCGGATGACTTAGAgtattttgataatataaaaactgaACCAATGTCACCGtga
- Protein Sequence
- MYHNLLDFVCDYCSRTFTRKHNLQTHIENCHINSTNKCSICRQSYGTPSGLQLHLSRGHNSRGQAFPECDLCGRIFTRKQNILSHMITVHLQGLGDDIRCHLCDKTFTTERNLKRHMNQQHNPNVEYPTCHHCERVFKAKHSLISHIQAVHSNTERDAIKCTLCDKVYTNTRNMKRHIEVFHEKKGVYRCDICPKVYTSNQSLRRHSRSTHSTESNEQYPCNFCNKIIIGRENFDTHIQFNHQNIDIDIKNNDGIVCEICHQVYEEEPALRQHTKNDHTFKEFYKYCRNALIKQYGTEFIDNVYNCEYCQHSFPSVYELKDHMRVSHDIEYSLSTCNVCFNKFYSKETMVAHKKLCVPPPNVKSCNHCDKLFTDISSLEFHTRIFHPQAQIADSIITSTNLDDDTTSFKCEHCDRIYYSDRSLKHHVKLKHTTDEQVECEYCNKICSNKYYLASHIKIVHNNDSWSHCEYCNKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSALFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALNIHLNTKHLAEDQIYKCEECNLVFKGQEKFDSHNEVHHVNLISNVKQKVLPRCILCMKDFSTRKTLKRHIKKFHPEFEVQELANFGSRRRNFNVDCEECIRNFNDENHRKIYQKLKHLKNSIIFKCETCGISYNCLEYSIQKYKLRNGDVGNTKTILSELCTTEMSEEENEYASRTVEEPESTSELNIKTEPDDLEYFDNIKTEPMSP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932904; iTF_00931727;
- 90% Identity
- iTF_00932904;
- 80% Identity
- iTF_00932904;