Lmon032222.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lymantria monacha
Gene Symbol
-
Assembly
GCA_905163515.1
Location
LR991103.1:22721982-22730738[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-12 1.3e-09 38.8 0.0 1 37 53 89 53 93 0.95

Sequence Information

Coding Sequence
ATGTACGCCACCGTGACAGTCGTCAATCAATATGGCTGCCAGTCAGGTGTGATAACTGcgatttatttagaaaatatttcaaaatcttTATTAAGTGCTTTGAAACAGTTTGCGatgcCGCGTAATTACGAAAGGAAAACCCTGAGGGCTTCTTGGTCTAACACGGACTTAAATGAGGCTATGCAAAAAGTGCAAAATAAGGAGATGGGAGTCAACGAGGCCGCCAGGGTTTACAATATCCCTTCAAGAACCCTTAGACGACATCTGTTAACAGGAAAACTTAAAGAACCACTCGGGAGACCGCCTGTTTTTTCAAAAGATCACGAAAAAAAGCTAGTAGCTCATATCAAAAAATTGGAAAAGGTTGGCTTTGCACCTGACCGCAAGGATGTTAAAGAAATGGCTTACCAGTTAGCTCAAAAACTTAGCATTAAAAATCCATTCTCGAACGATACCCAACAAGCAGGTAATATTTGGTTCAACTGGTTCTTAAAACGTAATCCTGAATTGAGTCAGCGAAAGTCTGAAGGTTTGTCACTCGCTAGGGCTTATGGCGTTAATCGAGAAGATGTTAATGATTTTTTCACACTGCTGGCTCAGGCATACGAAGACAATAACTTAGGTCATCATCCagatcaaatatttaatatggatGAGACTGGcatccaaataaataataaacctaCCACAGTAATTGCCAGCAAAGGAGCTAAAGATGTTTACACTTTGACTAGTTGCGAGAAAGGAGAAAATGTCACAGTCATAGCTTGCTGCAATGCTCAAGGTAACTTTATGCCAcctgttttaatttataaaggtACCTACAGTAAACCTCAGTTTTCTGAAGGACTGCCACCAGGTTCGCAAATATTTATGAACAAAAAGTCTTCATATATAAATTCTGAACTTTTCATGAAATGGTTCGAAGAGATATTCTTACAAAATAAAAGCCCTGGAAAAGCTCTATTGATACTGGATGGTCATAGTGCACACAGTAACAATATTCGTTTGTTAGAAGTGGCCATAGAGAATAATGTTACCTTGGTATGCTTACCAAGTCACACCACTCATGCACTCCAACCACTGGACAGGGCATTTTTCAGGCCTCTGAAGGTTTATTTCACCCAGGAAGCAAAGTCTTGGATGATCATGAACAAAGATAAGCGACTCACTCGGTATGATGTATCCAAACTGATTGGTAAGGCTTGGGGGAAGGCTGCTAGTGTATCTAATGGTATAGCTGCGTTAAAGTCCTGTGGAATTTACCCATATGATCCAAATGCCATACCAGAGCATTATTTTTCACTCTCAGATACGTTGCGAGAACAAGATCTCATAGATATTAATCaaggaaataataatgttaatgaaTTAGGTGCCTATTCAAAAGTACACAACATTGTTAACTATCGTGTAGAAACCGAACCAACAGCTTCGGCAGTGGCAATAACTGAAAACCATATGAATCTGGATAGTGGATCTacctataataaagaaaataggaGTACAGATAATGTTGGACAAGTTTCTGTTCCTGCACCTGAAAAAACGCCTCAAAAAGGTCGAGAACTGCAGTCAGAATTTTTAGAAGAAACACCTACAAAAGTTTTGACTAACATTCATCCCATACCTAAATTACCAGCAATGATGTTAAAGAAAAAGCAAAGGGCTCTAGTTTTGACATCTccagaaaatatacaaaaaagaaaagcgaTTGAAAAGAGAAAGAAGGATGTTGTGACGAagatatgcaaaaaaaataaagtaacaaaGGAAGATAAAAAAGGAAAATCGGGAAAAAAGAAAGCTACTATTTTCCATTCATCATCAGAaagtgataatgatgaagaaaattataagagCCCATCGATCGAGGATATTTCTGATGAAGAGAACAGGTGCATTGAATgtacaaaaaattattattgcacGACTTCTAAAGAAGATTGGATAAAATGTTCATCATGTTCATCTTGGATGCACGAGTTTTGTACCATGTATAATCCTCTTTGCAATGTTTGTGTGCTTCCACCTCGGACGCTTGTCGCGGCCATACGCACACGAGTGTCACATCAGACCAGTCCACAGAATATCGCGCAAGCAGCCTCCATTGTCGCTGGTCGCCTGGAACTAGACCTCCTCCGGGACTCCTTTCTCATCCGACTCAGGCAGACCATCATGGCGGTGTCCGAGTTGTTGCAACGGACAGATCACCAGCTGTCGCTAGTCGTTCCGGAGCAGACCGCCAACGCGGTGACAACGATACCGCTGATGTCGCTGGTCGCCTGA
Protein Sequence
MYATVTVVNQYGCQSGVITAIYLENISKSLLSALKQFAMPRNYERKTLRASWSNTDLNEAMQKVQNKEMGVNEAARVYNIPSRTLRRHLLTGKLKEPLGRPPVFSKDHEKKLVAHIKKLEKVGFAPDRKDVKEMAYQLAQKLSIKNPFSNDTQQAGNIWFNWFLKRNPELSQRKSEGLSLARAYGVNREDVNDFFTLLAQAYEDNNLGHHPDQIFNMDETGIQINNKPTTVIASKGAKDVYTLTSCEKGENVTVIACCNAQGNFMPPVLIYKGTYSKPQFSEGLPPGSQIFMNKKSSYINSELFMKWFEEIFLQNKSPGKALLILDGHSAHSNNIRLLEVAIENNVTLVCLPSHTTHALQPLDRAFFRPLKVYFTQEAKSWMIMNKDKRLTRYDVSKLIGKAWGKAASVSNGIAALKSCGIYPYDPNAIPEHYFSLSDTLREQDLIDINQGNNNVNELGAYSKVHNIVNYRVETEPTASAVAITENHMNLDSGSTYNKENRSTDNVGQVSVPAPEKTPQKGRELQSEFLEETPTKVLTNIHPIPKLPAMMLKKKQRALVLTSPENIQKRKAIEKRKKDVVTKICKKNKVTKEDKKGKSGKKKATIFHSSSESDNDEENYKSPSIEDISDEENRCIECTKNYYCTTSKEDWIKCSSCSSWMHEFCTMYNPLCNVCVLPPRTLVAAIRTRVSHQTSPQNIAQAASIVAGRLELDLLRDSFLIRLRQTIMAVSELLQRTDHQLSLVVPEQTANAVTTIPLMSLVA*