Basic Information

Insect: Lymantria dispar
Gene Symbol: -
Assembly: GCA_032191425.1
Location: CM063445.1:6647555-6667278[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0019 0.23 13.4 2.2 1 23 201 224 201 224 0.96

2 29 0.00034 0.041 15.7 0.5 2 20 256 274 255 276 0.93

3 29 0.051 6.1 8.9 0.3 2 23 316 338 315 338 0.95

4 29 0.00069 0.082 14.8 2.0 1 23 384 407 384 407 0.97

5 29 0.0096 1.1 11.2 0.5 1 23 425 447 425 447 0.96

6 29 3.5e-05 0.0041 18.9 1.1 1 23 484 507 484 507 0.96

7 29 0.015 1.7 10.6 6.1 2 23 546 568 546 569 0.96

8 29 0.0013 0.15 13.9 0.5 1 23 618 641 618 641 0.97

9 29 0.00052 0.062 15.2 0.1 1 23 695 717 695 717 0.97

10 29 0.00084 0.1 14.5 4.4 1 23 728 750 728 750 0.97

11 29 0.023 2.7 10.0 1.2 2 23 762 783 761 783 0.96

12 29 0.0085 1 11.3 1.9 1 23 793 815 793 815 0.98

13 29 6.1 7.3e+02 2.3 8.1 1 23 844 866 844 866 0.93

14 29 0.00057 0.068 15.0 3.6 1 23 877 899 877 899 0.98

15 29 1.6e-05 0.0019 19.9 1.1 1 23 907 929 907 929 0.98

16 29 0.00019 0.023 16.5 0.5 2 23 949 971 948 971 0.97

17 29 5.2 6.2e+02 2.6 0.2 1 22 989 1010 989 1011 0.80

18 29 0.12 15 7.7 3.7 1 23 1018 1040 1018 1040 0.97

19 29 0.0036 0.43 12.5 1.3 2 23 1051 1073 1050 1073 0.95

20 29 0.019 2.3 10.2 0.2 2 23 1096 1117 1095 1117 0.95

21 29 8.7 1e+03 1.9 5.6 2 23 1160 1182 1159 1182 0.95

22 29 0.011 1.3 10.9 0.2 2 23 1198 1219 1197 1219 0.95

23 29 4.2 5e+02 2.9 3.4 5 23 1229 1247 1226 1247 0.94

24 29 0.012 1.5 10.8 2.1 1 23 1257 1280 1257 1280 0.96

25 29 0.73 87 5.3 4.5 2 23 1297 1315 1297 1315 0.91

26 29 0.53 63 5.7 1.3 2 21 1319 1338 1319 1339 0.93

27 29 0.57 68 5.6 0.9 2 23 1390 1411 1389 1411 0.93

28 29 0.0003 0.035 15.9 1.0 2 23 1422 1444 1421 1444 0.96

29 29 3.5 4.2e+02 3.1 2.9 2 19 1482 1499 1481 1502 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0019	0.23	13.4	2.2	1	23	201	224	201	224	0.96
2	29	0.00034	0.041	15.7	0.5	2	20	256	274	255	276	0.93
3	29	0.051	6.1	8.9	0.3	2	23	316	338	315	338	0.95
4	29	0.00069	0.082	14.8	2.0	1	23	384	407	384	407	0.97
5	29	0.0096	1.1	11.2	0.5	1	23	425	447	425	447	0.96
6	29	3.5e-05	0.0041	18.9	1.1	1	23	484	507	484	507	0.96
7	29	0.015	1.7	10.6	6.1	2	23	546	568	546	569	0.96
8	29	0.0013	0.15	13.9	0.5	1	23	618	641	618	641	0.97
9	29	0.00052	0.062	15.2	0.1	1	23	695	717	695	717	0.97
10	29	0.00084	0.1	14.5	4.4	1	23	728	750	728	750	0.97
11	29	0.023	2.7	10.0	1.2	2	23	762	783	761	783	0.96
12	29	0.0085	1	11.3	1.9	1	23	793	815	793	815	0.98
13	29	6.1	7.3e+02	2.3	8.1	1	23	844	866	844	866	0.93
14	29	0.00057	0.068	15.0	3.6	1	23	877	899	877	899	0.98
15	29	1.6e-05	0.0019	19.9	1.1	1	23	907	929	907	929	0.98
16	29	0.00019	0.023	16.5	0.5	2	23	949	971	948	971	0.97
17	29	5.2	6.2e+02	2.6	0.2	1	22	989	1010	989	1011	0.80
18	29	0.12	15	7.7	3.7	1	23	1018	1040	1018	1040	0.97
19	29	0.0036	0.43	12.5	1.3	2	23	1051	1073	1050	1073	0.95
20	29	0.019	2.3	10.2	0.2	2	23	1096	1117	1095	1117	0.95
21	29	8.7	1e+03	1.9	5.6	2	23	1160	1182	1159	1182	0.95
22	29	0.011	1.3	10.9	0.2	2	23	1198	1219	1197	1219	0.95
23	29	4.2	5e+02	2.9	3.4	5	23	1229	1247	1226	1247	0.94
24	29	0.012	1.5	10.8	2.1	1	23	1257	1280	1257	1280	0.96
25	29	0.73	87	5.3	4.5	2	23	1297	1315	1297	1315	0.91
26	29	0.53	63	5.7	1.3	2	21	1319	1338	1319	1339	0.93
27	29	0.57	68	5.6	0.9	2	23	1390	1411	1389	1411	0.93
28	29	0.0003	0.035	15.9	1.0	2	23	1422	1444	1421	1444	0.96
29	29	3.5	4.2e+02	3.1	2.9	2	19	1482	1499	1481	1502	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGATTTCTACTCCATCTTCACGGTGGACAACTCGTTGCAATTGGCGGAAATGGCAATGGAATGTGCCCGGGTGAAAATTTATGATGGAGATGGATTGCCAGACAAAGTATGCTCTGAATGCATACAAAAACTTAGCAGTGCTTACATATTTAAGCAACAGTGTGAGCGTGCTGACCAAGAATTGCGAAGAAATTATATACCACCTCcagGGTTTAGCATCAGTCCGCCACCACCCAATAGGCAGAGTAGTGATTCTGCATTTTCAAATCACACCAACAGTTCAAATTTTACCAAACCGTCATCTTCAAACGAAGAAAAAATATCACCCGCATCCAGAAATCGAAAACGGAGCATAGAAAGTGATGGCAACATCTCAATTGGAGGACGATCTAATGATTTCAGACCGTCTAGTTCTAAGCGCGTTGAAGAACTTCGAAATACGCAAAAGAGGCCACGCTTGCAATCTGAAAATAATTCACAGCAAGATTCCGATTATGAAGATGTTAGTGGATCTTATCTACCAGAAACTGATTCGGATGAACCTCTGATGAGGAATTTCAAATGCAAGATATGCCATAAAGAATTTGTAGCATACAAAAATCTCGCCATTCACACTACTAGGATGCATGGTAAAAAACTTGAAGAACCTCTAGGCAAAGATGCCGTTGTGGAAATACCGAAGAAAAATAATGAAGATGCAGTAGACGTTGAAGACAAATTGACTTGtgacaaatgcgataaaacatttaaacttaaaattatgttGAAGCGTCACCAGGATGTGTGTGGAAAAACGCCGGTCAAATCACCTCAAAAGCAATTGCTCGTATCATTAGAACCAATCGATGCTAAACATAATGTCCAAACtccaacaacaacaacaactacTGCTTCTACCGTCTCCTGTGAATATTGTATGGGCCAGTACAAAAATCGCGATACCTTAGCAAAGCATATGAAGATTGTTCACGCTGCGGTTCTGAAGAAAGCAGAACCTAACAAAAAGGTGCCTGTACCGTGTCTATATTGCAATCAACTATTTGATGATTACCAACTACATAACGCGCATTTTGTCTCCTGTCCTAAGACAGATGAGTCTAAACCTTTCGAGTGTCccgtttgtaataaatttaCGTCTAGAAAGACATCATACTATCAACATATAAAGAACATGCATTTCGAACCCCGGATTTTGGTTGCGGAGCCTGAGGTTGACTCGCAAGATACTTATGAGTGTCGAATGTGTTTCAAGAAGCTCTCATCACAAGACACACTGATTGAGCATTTGACTGCACATGTTACCAAAATCCAGGAAGATGGTGATAATGAATCCAGagccAGCACTCTGGATGATACTGCTTCTGTACATTCAGTTCAGAGCAATACTTACCCTGCAAGTGGAGCCTATAAATGTGATGTTTGTGGCAAAGAGTTCAAATACAAAAAAGCACTCGCCACGCACAAGGAGAGGAGTCATACAGAAGTTCCTATCGAAGTAAAAATCGAACCACCCGATAAAGCGTCAACTAGCTTAGTTAGCGCGACAAAATATCGCTCTGAATCGGAATCTAGTCAAGAAGAAGATGATAATACTTGCGATATATGTGAGAAGCGGTTCTCATACAAACGTGTGTTACTTCACCATAAGAGAACGAAACACCACATGAGCTCTGGTCATAAATTAGCTAAAGTCCACCTAAAGGACTGTTTAGTCCGCTGTCTAATCTGCGACTTAGAAATGAAAGTCAGCGATATAAATGAACATAATCAAACTCACATAGCAAAGAATATAAAACCCAGAAACATATATACCTGCACTGAATGTGAAGCTACATTCAAAGCATGCAGTGCTTTAGCGACCCATATCAAATTAGTTCACAGATTAAAACAGAAGGTTGAAGAGAATACGGTGAATCCGTCGGATTTTTGTGAAGTCGTTGTGACGAAACCGGAACCTCTGGAATGGAACCAGAGTCACAACGACTTTGGCAAGGTTCCGAATGATACAGAGGGCAATCCACTTGTGAATTTGAGTGGATTCACTTGCCCCATCTGTGGAAAGAAGATGGCTACGTTGATCTCGCTCAAGAGACACGTCAATTGGCATACTAACGTCGGTCAAAACATAGAGAAGAAGTATGACTGCTTCGTATGTAATGAGTCATTCAGATTCCAGCGTCACTATAAGCTACACATGCGTGAACATTATACGGACACAAATCTAAATCCGGCACATCTAACATGCAATATATGCGGCCGAAAGAGCAAACATTTGCGCGCAGCACAAGCACACATGACATACCACAAACAGACTCGCTTCAAAAGCAAAGACTACCAGTGTTCAATATGCGAGAGGATCTTCCAACATAGAAAAGTATATCTATCACATATGCTTATACATTATAAGAGAGGTGAGAGCGTACAAAACACTATAGTCGGTGACATTATTCCAAATAACGTAGATAGAACTATATTCGATGGTACACACACATGCAGACACTGTGGAAAAGTTTGTGACTCCGAGAACTCATTAAAATGTCATCTCACTTGGCATAATTCAAAAACTTTTCTATATGGCGCACGTCATGAATGCCAGATatgcaaaattaaatttaccAATAAAAGAAGACTTGAAATACATACAAGAACACATTatgaggatgaaaatggacctTATAAGTGTAATATATGTGGTAAGGGTTACACAGATGAGACTTACTTCAAGAGACATGTTAAAGGCCACAATTTTGATCATCACTCTCACAAGAAGAGGATTGAAAAATTTCGAAAGGATAAAGTGAAATGTCCCATATGTTCACGGTATTACAAGGATTTAGGGAAATTGATCCGTCATTTGAGGCGGACACATCCTGAGAGTAAGATGATCAAAACTGATCCGGATGCACCTCCGCAACCTTATTTCTCATGTAAATTGTGCGCCAAAGTGTTCCTCGAAGAACGTCGCTTACAAGCGCACGAGGAAGCACATTTAAGGAAGCCTGAATTTTTTAAATGCAAATTCTGTGGAAAGAAAACAATTTCTTTGAAAAATCATAGGGTACATATAAAAGGTCATTTAACTCAAAAGTACATTGACAATCCGCTGAAATGTCAGCTTTGCGATGAAACTTTTGGACGAGGCTATGATTTGCATTACCACATGCGAGACACACATGATATTGAGGAAACTTGGATCGCCGATCGCACTGAACAGCGCCTCATGGGTCCGCTTAAAGATCTGCAGTGTTCTATATGTATGAAGGTTCTCGCCAGCAAAGGCAACTTCGAGCGACATCTCGATTATCACAACTCTCTGAGATGCAATTATTGCTTTGATTACTTCAGCTCGCTGCGGTTCCTGGAGGGGCATTTAGCATTCTCATGTGATAAGAAAAAGTTGTTAGGCGAAACTGAGACTTATTCTAAGAAAATAAAGTGCCACGTTTGCTATAAACCTTTCCATGTTCAAGTGAAACTAGATTGTCATCTCCGGACGCAACACGGCATCAAAATCTGTCGCGAAGCCTCGTCTAGTAACAAAGAAATTGTTTGCGACTATTGCTTTAAAGTATTTGAGAATGATTACGCTTTGTCCACTCACAAAATTTACCATCGCACAATAGGTTACTATGGATGTATTTATTGCAAGAAAAAGTTTGGTACTATTACACTTTACCGTAaacataaaaatcatcattttgctcAAATAAATGTGGACGAGCCGCATAAATGTGAACATTGTGATGAGACTTTTGTAGCATTTAGAGACATGATATACCATATGAGGGATGTTCACGGAGATGATAAAGATTGGATCACAATGCCCAAAGAATCCATTGAGGAGACATGCAAGATCTGTAATAAGAGTTTCTTCAATTTGCACAGACACTTGTCTTACCATGAGGAGAACAGATGCAAGAAGTGCGGTGAATATTTCTTCTCAACAGCAGATTTCGATAACCACTTGTGCGTTATAGAAAGTGACGATGAAGTTAACAGTAGTGTCAACAGCTTCGCTGAAAACCAAGCTAAATATGAAGAGTGCAGATTCTGCTTCAAGCCTATCACTAGAAAGAGTTCTAAAGCTAAGCACGATCATATTCACAAAGGATCTGGTTCGATCTCATGCAGATTCTGCTCGCTAAAGTTCAAAACAATGGATGCTTTTAATATACATGCATTCTCACATAGAAGCAGAAAATATAACAAGAGGCCGATTAAGTGTAAGAAATGTGGAGAGAAGTTTATTAAATACGGACTGTTCATGAAACATATGAAGCTTATACATAAGTCTATGAAGAAGATGCATTACAGAGCTGTGGTGAAACCAGAACCGTGTGCTATTTGTGGTGATGAATTCCCCAATTTACACAACCATTATCGGGCTCACATGTATAACCAATGTCAGTCCTGTCGCAAGTATTTTACTTCATCTAAACTTTTCTCTATGCATGAATGTGATAAGGAGGATTCCGATCCTTCCAAAATATTTACATGTGACATGAAATTGAAAGATCTTATAAACTCATATATACCGAAAGATTTGAAGGACGATGAAAAATATTATGGTCATactgatgatgaagatgaacaGGAGGAAGTACTTTCACAAGTGTGTATTGAAGATGAGGAGAGCCAAGACTGTAAAGATTTCAAAGACATTGTTACTGTTAATGAGGAATTGCCTCTTCAGCCTATATCTATTCAATCTCCTATAATATCGGATGTGCTGTCTTTATATCAAAAAGAAATGACACCAACTGCTGTTGATTACATTATAAATGATGATGTTGTGAACATTATAGATGATGATTCTTTAGATGTTGATCATGTAGCCGTGAATAATGAACCAATtgtgattgatgatgatgattaa
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMECARVKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYIPPPGFSISPPPPNRQSSDSAFSNHTNSSNFTKPSSSNEEKISPASRNRKRSIESDGNISIGGRSNDFRPSSSKRVEELRNTQKRPRLQSENNSQQDSDYEDVSGSYLPETDSDEPLMRNFKCKICHKEFVAYKNLAIHTTRMHGKKLEEPLGKDAVVEIPKKNNEDAVDVEDKLTCDKCDKTFKLKIMLKRHQDVCGKTPVKSPQKQLLVSLEPIDAKHNVQTPTTTTTTASTVSCEYCMGQYKNRDTLAKHMKIVHAAVLKKAEPNKKVPVPCLYCNQLFDDYQLHNAHFVSCPKTDESKPFECPVCNKFTSRKTSYYQHIKNMHFEPRILVAEPEVDSQDTYECRMCFKKLSSQDTLIEHLTAHVTKIQEDGDNESRASTLDDTASVHSVQSNTYPASGAYKCDVCGKEFKYKKALATHKERSHTEVPIEVKIEPPDKASTSLVSATKYRSESESSQEEDDNTCDICEKRFSYKRVLLHHKRTKHHMSSGHKLAKVHLKDCLVRCLICDLEMKVSDINEHNQTHIAKNIKPRNIYTCTECEATFKACSALATHIKLVHRLKQKVEENTVNPSDFCEVVVTKPEPLEWNQSHNDFGKVPNDTEGNPLVNLSGFTCPICGKKMATLISLKRHVNWHTNVGQNIEKKYDCFVCNESFRFQRHYKLHMREHYTDTNLNPAHLTCNICGRKSKHLRAAQAHMTYHKQTRFKSKDYQCSICERIFQHRKVYLSHMLIHYKRGESVQNTIVGDIIPNNVDRTIFDGTHTCRHCGKVCDSENSLKCHLTWHNSKTFLYGARHECQICKIKFTNKRRLEIHTRTHYEDENGPYKCNICGKGYTDETYFKRHVKGHNFDHHSHKKRIEKFRKDKVKCPICSRYYKDLGKLIRHLRRTHPESKMIKTDPDAPPQPYFSCKLCAKVFLEERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDNPLKCQLCDETFGRGYDLHYHMRDTHDIEETWIADRTEQRLMGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLLGETETYSKKIKCHVCYKPFHVQVKLDCHLRTQHGIKICREASSSNKEIVCDYCFKVFENDYALSTHKIYHRTIGYYGCIYCKKKFGTITLYRKHKNHHFAQINVDEPHKCEHCDETFVAFRDMIYHMRDVHGDDKDWITMPKESIEETCKICNKSFFNLHRHLSYHEENRCKKCGEYFFSTADFDNHLCVIESDDEVNSSVNSFAENQAKYEECRFCFKPITRKSSKAKHDHIHKGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYNKRPIKCKKCGEKFIKYGLFMKHMKLIHKSMKKMHYRAVVKPEPCAICGDEFPNLHNHYRAHMYNQCQSCRKYFTSSKLFSMHECDKEDSDPSKIFTCDMKLKDLINSYIPKDLKDDEKYYGHTDDEDEQEEVLSQVCIEDEESQDCKDFKDIVTVNEELPLQPISIQSPIISDVLSLYQKEMTPTAVDYIINDDVVNIIDDDSLDVDHVAVNNEPIVIDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_00932926;
80% Identity: -