Basic Information

Insect: Lygus lineolaris
Gene Symbol: ZNF236
Assembly: GCA_030264115.1
Location: JAEMON010000006.1:15572398-15598741[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00055 0.053 14.8 0.9 3 23 205 225 203 225 0.97

2 23 0.00092 0.089 14.1 1.7 1 23 231 253 231 253 0.96

3 23 1.3e-05 0.0013 19.9 0.1 3 23 260 280 259 280 0.97

4 23 0.0089 0.87 10.9 0.0 2 23 287 308 286 308 0.95

5 23 0.0027 0.26 12.6 1.2 1 23 320 343 320 343 0.95

6 23 1.5e-06 0.00014 22.8 1.7 1 23 358 380 358 380 0.99

7 23 2e-06 0.0002 22.4 0.2 1 23 386 408 386 408 0.98

8 23 4.1e-05 0.004 18.3 0.5 1 23 414 437 414 437 0.96

9 23 2.8 2.7e+02 3.1 7.2 3 23 449 469 448 470 0.95

10 23 0.00046 0.045 15.0 4.3 2 23 548 569 547 569 0.98

11 23 1.2e-05 0.0012 20.0 5.1 1 23 764 786 764 786 0.99

12 23 1.3e-06 0.00013 23.0 1.5 1 23 792 814 792 814 0.98

13 23 1.3e-06 0.00013 23.0 0.4 1 23 820 842 820 842 0.97

14 23 0.0013 0.13 13.6 1.4 1 23 848 870 848 870 0.98

15 23 0.0038 0.37 12.1 1.0 1 23 1027 1049 1027 1049 0.97

16 23 8.6e-05 0.0083 17.3 0.1 2 22 1056 1076 1056 1076 0.95

17 23 0.033 3.2 9.1 2.0 2 23 1106 1127 1105 1128 0.95

18 23 1.7e-07 1.7e-05 25.8 0.8 2 23 1233 1254 1232 1254 0.98

19 23 0.001 0.098 13.9 1.7 1 23 1260 1282 1260 1282 0.98

20 23 0.00028 0.027 15.7 0.5 1 23 1288 1310 1288 1310 0.98

21 23 0.005 0.49 11.7 2.0 1 23 1316 1338 1316 1338 0.96

22 23 0.0074 0.72 11.2 0.1 5 23 1499 1517 1497 1517 0.96

23 23 0.11 11 7.5 1.2 2 22 1523 1543 1522 1543 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00055	0.053	14.8	0.9	3	23	205	225	203	225	0.97
2	23	0.00092	0.089	14.1	1.7	1	23	231	253	231	253	0.96
3	23	1.3e-05	0.0013	19.9	0.1	3	23	260	280	259	280	0.97
4	23	0.0089	0.87	10.9	0.0	2	23	287	308	286	308	0.95
5	23	0.0027	0.26	12.6	1.2	1	23	320	343	320	343	0.95
6	23	1.5e-06	0.00014	22.8	1.7	1	23	358	380	358	380	0.99
7	23	2e-06	0.0002	22.4	0.2	1	23	386	408	386	408	0.98
8	23	4.1e-05	0.004	18.3	0.5	1	23	414	437	414	437	0.96
9	23	2.8	2.7e+02	3.1	7.2	3	23	449	469	448	470	0.95
10	23	0.00046	0.045	15.0	4.3	2	23	548	569	547	569	0.98
11	23	1.2e-05	0.0012	20.0	5.1	1	23	764	786	764	786	0.99
12	23	1.3e-06	0.00013	23.0	1.5	1	23	792	814	792	814	0.98
13	23	1.3e-06	0.00013	23.0	0.4	1	23	820	842	820	842	0.97
14	23	0.0013	0.13	13.6	1.4	1	23	848	870	848	870	0.98
15	23	0.0038	0.37	12.1	1.0	1	23	1027	1049	1027	1049	0.97
16	23	8.6e-05	0.0083	17.3	0.1	2	22	1056	1076	1056	1076	0.95
17	23	0.033	3.2	9.1	2.0	2	23	1106	1127	1105	1128	0.95
18	23	1.7e-07	1.7e-05	25.8	0.8	2	23	1233	1254	1232	1254	0.98
19	23	0.001	0.098	13.9	1.7	1	23	1260	1282	1260	1282	0.98
20	23	0.00028	0.027	15.7	0.5	1	23	1288	1310	1288	1310	0.98
21	23	0.005	0.49	11.7	2.0	1	23	1316	1338	1316	1338	0.96
22	23	0.0074	0.72	11.2	0.1	5	23	1499	1517	1497	1517	0.96
23	23	0.11	11	7.5	1.2	2	22	1523	1543	1522	1543	0.92

Sequence Information

Coding Sequence: ATGGGACATCAGACGGGTGTGTTCGCCTCATTGGTGCCACTGAGAAGCGAATGGATCGTCTGCAAGGATAACAAAATTATGCCGTCTTGGTTTATTACTATGGGCACCACTGAGATGAGTGAGATTGACCTTCAGGATGGTTCATGTACTTTCACTGCCAATGTGATCGGGACTCAACTCCTATTTTCACTGCCAGACGCAGCGCCGCATCAATCTGCTGACTCTGCAATCGTTATTGAAAATGGAGTCCAGTACATACCGGTCTATGTACAAGAAACTCTCCCATCAAACGTTGTCAGTAGCTACGTCATTGATGATTCACAGCAACTGCCTCTTCTCAATCACTCTCGCCAAATCATCCTTACTGAAGAACAAATCGTGACGTTTAACCAAGTAACGACTTCCTCCATTCAGGAAAATGATTTCTCTCAACATTTTCTCAGCTTGACAGCAGATGAAGCTCAAGAAAATTGTGATTTCGATGTTTTGGATAATGGAAAAAAAGCTGCGATTATTGTTGAGAAGGAAGACGTTCTTGCACTTAACGGTGTACCCACACCTATAGTGGACTACGACGCTGTTGATCCTCCAGACAATACAtGCCCCCAAGCATGTGATACCTGTGGTTTGAGATTTGAGTCGAGGAAACTGTTCAAGAAACACATTCTTTCCCACTTACACGAGAAGCCATTTAAATGCCCTCATTGTCCCGAATCTTTCAACCACGAGTACAACTACATTCCCCACGTAGCAACACACAACAAGAAAGATCCATTCTGTCCTGTGTGTAACAAAAGGTTCAGTCGCCTAGCTGGACTCAAAGCGCATATCCTTATACATCAGTGTGATGACACCCTCCCTTGCCCTGAATGCTTGGAGGAATTCAGTAGCCAGaAACTCCTAGATGCCCATCGGCTTGAACACAAATCTGGATTTGTGAGAATTCCTACTCGTTTTCATTACTGCACAAGTTGCGATGAAAAATTCGTAACTCGAGCTTTTTTGAAAGAACACATCCAGGAAGTTCATAAGCTTAAGATAcccaagaaaattaagaaagGCAAAGGCGGATACGTATGCGAATTCTGTAAAAAGCGCTTTGCGAAACCCAGCCAGTTAGTCCGGCATCGAAGAACTCACACTGGCGAAAAACCCTTCAAAtgtgcaGAATGTGGTAAAGGGTTTGGTCAGAAGGGAAGCCTTCAGATCCACATGCTCAAACATTCTGGGGAACGGCCGTACGCTTGCAAATATTGTTCCTCTCAATTCAGCCAAAAAGGCAACCTGCAAGCTCACATCCTTCGCATTCATCCTGAAGAGAAGGATGAAATGAGGAATCGTCATTGTAAATTTTGTTCCTCTTCGTTCAGAAATATCGTTGGACTCCACAGTCACATGTCTCGGCATCATGGCGTTATTTATTCTTCTAAGAGAGGAAAGTCAATTACTTTCAACGAGCTTCCAAACCGTGAGGATGAAATCGTTGTAGACATTTCATTAGTTGATAAAGATACATCTAATAAAGAAAATGAGggaaagacactagaatcttcAGGAGTTGTGATCAGCAATGACGAAGAGCGTCCAGCAAATCCCGAAGTTGATCCCAAGGGGAAACATTCGTCTGCGGAAGTAATCAATAAGTGCAAGCATTGCTACAAAATGTTCCCGAAGCGGACTGATCTCGTCAAGCATCTCAAAATGCATGCGGAAGAAATGAAGCAAAAGACTGAATATGTGTGTGACTGTGGAAAACGTTTTCCGTGCGAGACTAATCTGATGTGCCACGTGCAGGCTGCACACTCGGAAGAAGTCACTTGTGAAACTGGTAACAGTCAGTCCGACTCCTTGAAGGACGTGCAACATCAAAGGAAATGGAAACCTAATTTGACTGACCAAGAAGTTAGGAGCGAGGTGTCGCCTGCTGTACGTGATGTTGAGCTCCATAGTTCTGATCAAGAAGAAATAATCCTAGGGCCAAATCCACCAATTATCCCACTTTCTGAGCCATCTCCAGTTCAGCCAGTGACATCAACTTCTATCACGGTTACGTCGAACTCAAAAATTCTCGGAGACATCCCTATTGAATGCGCCAAACTTCTCATAACTGCTGATGGCACCATTGAAGTTATCCATGATCGTGACATTGGTAAAGCAATCATTAAGACAGAAGTGCCCGAAGAACCGGCTACAGAAAATGTTGCTCCAGCCAGCGAAGAAGGTGAGCAATATCTTGTGCAAGAAGTCATCGAAGAATCAACGAGAGTAGATGAAGACAACTCCAGGAAGTATAAATGCGACCACTGCAACCTCGCATTCAAACAACAAAGTCATTGGAAGACACATTTGAGGATTCATACTGGCGACAAACCATATTCGTGTGAAACGTGCCACAAgacttTTGCATCCAAAAGTGCGTTGACAGTTCACATGGGAACGCACGACGACGTGCCTTCCTTCAACTGTGAGGATTGCGGTAAGGCGTTCTCCACCGCTCGTAGTATGAGACGCCACATGGAGCTACACGTACCAGGATTCCCCTACACCTGCTTCGTTTGCTCCAGGGGttacaaaaccaaaatgtcctgGCAAAAACATCTGGCTACTCATTTAAAAATCACTCAGAAAGGAGATGAAGTGCAAAATACATCTGAAGACAAAGATGCAAAAGGAAGTGATGGTGGCGATGAATCTGACCAAGTGGTGCATCAAGCTAAGGATGATGGAGCCAGTGAACAGAAGAAAGCAGCTTCTTCAAATGGTGCTTTCCAAGGAGACTGGAATGACCTCATACAATCATTTCAACCTGGGCaatcattcaatttcaataGTACACAAGACGTTATTTCAGCTACTGTTACATCATCATCCACAAAAACTACTTCATCTAGTTCAAATACTACTCGTCTACCAAACGAAGTTCGATTTACTGGAGGAACTTGGAGTGATGACTGTCAATTATTCAATGCTCAAGCCAATCAAGATTTCGATGGTTGTGTCTTCTTGCAAaatAGTGGCAACCTTCCCACCAGCGTGCCCTCTGTGGTGTCCGTTCCCACACCTCCCCAAGCAAACTCTCACCGCTGCTCCCTCTGCGACGTCAGTTTCGATAACCTCGTAGAGCTCTCCATCCACAAGACAACGCATCTACAAGACAAATGGGCCACGTGTGCTACTTGTGACAGAGTCTTCAGCTCTTTGTCAGATTACCAGGCACACATGAGAGTTTGTCCGCCGTCTTCTAATTCACAATCTGCTGACAAGGCAAATCAAGAGTACATGTGTATGGATTTTCTCGAGGCCTCAAAACTACAGAAATGCGCCACGTGTGACAtccattttttccaaccaacCGACTACGTGATTCACGTCAACACTCATCATGGGGCGATAGCCTGCAAATACTGTTCAGAGTGGTTCAAAACGGATGCTGAACTCAAGGATGCCAGTATGGAGTTGGTTAACATTGGTATTGCTGGGGATAGGAAACCGGTGAGCTCGAGGGAGAGGTTAGAACTGAAGAGAAAGAGGAATGCTTGGAGACGACAGGCAATACTACCACTGACTGAAGAGGAACAATTGGCCATTGCCAAAGAAAGCCCTAGCTCCATATCTGAAAAAATCCTCCAGCAATCTATTTTACGCCTGAAGAAGGAACCCATCAAAACGGAACCTGAAATGGAAAAACACCCTAATCAATGCAAATACTGCCCTAAGAGCTTCCGCAAACCTTCAGATCTCGTTCGACATCTTAGAGTCCACACTGGCGAGCGCCCTTACACGTGTACATCATGTAACAAGTCGTTTTCGATCAAATCGACGGCCAAAAGCCACGTTAAAATTCACAAGAAGGAACAGGCTTACAGTTGCCACATTTGTAATAATTCTTTCGCTGCTATTGGAAGTCTGAAAGTCCACATGAGACTTCATACAGGTGCTAGGCCTTTTGCTTGTGAACTGTGCCCAGCTAAGTTCCGCACTTCAGGTCATAGGAAGTCCCACATGTTCTCTCACCAAAAAAAAGAGTCGGCGAAGGAGAAAGACAATACGTACTTGCCATTACCTGTCGAGCAAGCTCCGTCGCCTCCTCGATCGCTGCCACAGCCTCCCAAAATCCCCTCACCGGTCAAATACTTGCGAGACCAAGACCAGTTGGAGCCCGAATTCGGCAAAGCCGCGGAAAAGTACGTCGAGGTCATGGAAGTTGACCAGCTCAAGAAACCTTTGCCAAATAGTCAACTCCTATTCTCCCTAGACAACGCGTTGAACTTTGGTGACCGACCAGGCGAAGTGACGAGTCAGCAATTCTTCTTGAAAGAGGTCAAAGGAGATGAACAAGCTGGAACTGCAGCCCATTTCGTCGTCACGATGGGTGATGAAATCAATTACCAAGACAACATCAATGACCTTTTGGAGTCTGTTCCTAACCTCAACGAAGATCCTGAAGACAGATTAAACCTTGACCTCGACCTAGACGTGCCCAGTAAACAACAGGTATGTAAACAAACATTCAGGGGCAAAACTGATTTAGAAGTCCATATGTTGGTGCACGAACTGGACCAGCTCTCCTGCCACGCCTGCTCTCTCGAATTCCCTGATGAAAGTGCCCTTCGAAAGCACAAATGCACAAATGAAGACTCGGACATAAAAACGATGCCTTCAACTTCGCTTGACCTCGCTTCTGTTGTACATGAATTTTTCTCGTTTCCTACTTTATAG
Protein Sequence: MGHQTGVFASLVPLRSEWIVCKDNKIMPSWFITMGTTEMSEIDLQDGSCTFTANVIGTQLLFSLPDAAPHQSADSAIVIENGVQYIPVYVQETLPSNVVSSYVIDDSQQLPLLNHSRQIILTEEQIVTFNQVTTSSIQENDFSQHFLSLTADEAQENCDFDVLDNGKKAAIIVEKEDVLALNGVPTPIVDYDAVDPPDNTCPQACDTCGLRFESRKLFKKHILSHLHEKPFKCPHCPESFNHEYNYIPHVATHNKKDPFCPVCNKRFSRLAGLKAHILIHQCDDTLPCPECLEEFSSQKLLDAHRLEHKSGFVRIPTRFHYCTSCDEKFVTRAFLKEHIQEVHKLKIPKKIKKGKGGYVCEFCKKRFAKPSQLVRHRRTHTGEKPFKCAECGKGFGQKGSLQIHMLKHSGERPYACKYCSSQFSQKGNLQAHILRIHPEEKDEMRNRHCKFCSSSFRNIVGLHSHMSRHHGVIYSSKRGKSITFNELPNREDEIVVDISLVDKDTSNKENEGKTLESSGVVISNDEERPANPEVDPKGKHSSAEVINKCKHCYKMFPKRTDLVKHLKMHAEEMKQKTEYVCDCGKRFPCETNLMCHVQAAHSEEVTCETGNSQSDSLKDVQHQRKWKPNLTDQEVRSEVSPAVRDVELHSSDQEEIILGPNPPIIPLSEPSPVQPVTSTSITVTSNSKILGDIPIECAKLLITADGTIEVIHDRDIGKAIIKTEVPEEPATENVAPASEEGEQYLVQEVIEESTRVDEDNSRKYKCDHCNLAFKQQSHWKTHLRIHTGDKPYSCETCHKTFASKSALTVHMGTHDDVPSFNCEDCGKAFSTARSMRRHMELHVPGFPYTCFVCSRGYKTKMSWQKHLATHLKITQKGDEVQNTSEDKDAKGSDGGDESDQVVHQAKDDGASEQKKAASSNGAFQGDWNDLIQSFQPGQSFNFNSTQDVISATVTSSSTKTTSSSSNTTRLPNEVRFTGGTWSDDCQLFNAQANQDFDGCVFLQNSGNLPTSVPSVVSVPTPPQANSHRCSLCDVSFDNLVELSIHKTTHLQDKWATCATCDRVFSSLSDYQAHMRVCPPSSNSQSADKANQEYMCMDFLEASKLQKCATCDIHFFQPTDYVIHVNTHHGAIACKYCSEWFKTDAELKDASMELVNIGIAGDRKPVSSRERLELKRKRNAWRRQAILPLTEEEQLAIAKESPSSISEKILQQSILRLKKEPIKTEPEMEKHPNQCKYCPKSFRKPSDLVRHLRVHTGERPYTCTSCNKSFSIKSTAKSHVKIHKKEQAYSCHICNNSFAAIGSLKVHMRLHTGARPFACELCPAKFRTSGHRKSHMFSHQKKESAKEKDNTYLPLPVEQAPSPPRSLPQPPKIPSPVKYLRDQDQLEPEFGKAAEKYVEVMEVDQLKKPLPNSQLLFSLDNALNFGDRPGEVTSQQFFLKEVKGDEQAGTAAHFVVTMGDEINYQDNINDLLESVPNLNEDPEDRLNLDLDLDVPSKQQVCKQTFRGKTDLEVHMLVHELDQLSCHACSLEFPDESALRKHKCTNEDSDIKTMPSTSLDLASVVHEFFSFPTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00145823;
90% Identity: -
80% Identity: -