Basic Information

Insect: Apolygus lucorum
Gene Symbol: ZNF236
Assembly: GCA_009739505.2
Location: CM019168.2:37203622-37297019[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00041 0.034 14.7 0.9 3 23 171 191 169 191 0.97

2 25 0.00069 0.057 14.0 1.7 1 23 197 219 197 219 0.96

3 25 9.7e-06 0.0008 19.8 0.1 3 23 226 246 225 246 0.97

4 25 0.0067 0.56 10.9 0.0 2 23 253 274 252 274 0.95

5 25 0.002 0.17 12.6 1.2 1 23 286 309 286 309 0.95

6 25 2e-06 0.00017 22.0 1.7 1 23 324 346 324 346 0.98

7 25 1.5e-06 0.00012 22.4 0.2 1 23 352 374 352 374 0.98

8 25 3.1e-05 0.0026 18.3 0.5 1 23 380 403 380 403 0.96

9 25 2.1 1.7e+02 3.1 7.2 3 23 415 435 414 436 0.95

10 25 0.00015 0.013 16.1 3.7 2 23 514 535 513 535 0.98

11 25 9.1e-06 0.00075 19.9 5.1 1 23 730 752 730 752 0.99

12 25 7.2e-06 0.00059 20.3 1.6 1 23 758 780 758 780 0.98

13 25 1.5e-06 0.00012 22.4 0.4 1 23 786 808 786 808 0.96

14 25 0.0023 0.19 12.4 1.3 1 23 814 836 814 836 0.98

15 25 0.0029 0.24 12.1 1.0 1 23 996 1018 996 1018 0.97

16 25 0.00018 0.015 15.8 0.1 2 22 1025 1045 1025 1045 0.95

17 25 0.013 1.1 10.0 2.9 2 23 1075 1096 1074 1097 0.95

18 25 1.4 1.2e+02 3.6 0.8 3 23 1102 1123 1100 1123 0.94

19 25 1.3e-07 1.1e-05 25.7 0.8 2 23 1233 1254 1232 1254 0.98

20 25 0.00075 0.062 13.9 1.7 1 23 1260 1282 1260 1282 0.98

21 25 0.00021 0.017 15.6 0.5 1 23 1288 1310 1288 1310 0.98

22 25 0.0038 0.31 11.7 2.0 1 23 1316 1338 1316 1338 0.96

23 25 0.00025 0.021 15.4 0.3 2 23 1503 1525 1503 1525 0.97

24 25 5.2e-05 0.0043 17.5 0.3 2 23 1532 1553 1531 1553 0.96

25 25 0.084 7 7.5 1.2 2 22 1559 1579 1558 1579 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00041	0.034	14.7	0.9	3	23	171	191	169	191	0.97
2	25	0.00069	0.057	14.0	1.7	1	23	197	219	197	219	0.96
3	25	9.7e-06	0.0008	19.8	0.1	3	23	226	246	225	246	0.97
4	25	0.0067	0.56	10.9	0.0	2	23	253	274	252	274	0.95
5	25	0.002	0.17	12.6	1.2	1	23	286	309	286	309	0.95
6	25	2e-06	0.00017	22.0	1.7	1	23	324	346	324	346	0.98
7	25	1.5e-06	0.00012	22.4	0.2	1	23	352	374	352	374	0.98
8	25	3.1e-05	0.0026	18.3	0.5	1	23	380	403	380	403	0.96
9	25	2.1	1.7e+02	3.1	7.2	3	23	415	435	414	436	0.95
10	25	0.00015	0.013	16.1	3.7	2	23	514	535	513	535	0.98
11	25	9.1e-06	0.00075	19.9	5.1	1	23	730	752	730	752	0.99
12	25	7.2e-06	0.00059	20.3	1.6	1	23	758	780	758	780	0.98
13	25	1.5e-06	0.00012	22.4	0.4	1	23	786	808	786	808	0.96
14	25	0.0023	0.19	12.4	1.3	1	23	814	836	814	836	0.98
15	25	0.0029	0.24	12.1	1.0	1	23	996	1018	996	1018	0.97
16	25	0.00018	0.015	15.8	0.1	2	22	1025	1045	1025	1045	0.95
17	25	0.013	1.1	10.0	2.9	2	23	1075	1096	1074	1097	0.95
18	25	1.4	1.2e+02	3.6	0.8	3	23	1102	1123	1100	1123	0.94
19	25	1.3e-07	1.1e-05	25.7	0.8	2	23	1233	1254	1232	1254	0.98
20	25	0.00075	0.062	13.9	1.7	1	23	1260	1282	1260	1282	0.98
21	25	0.00021	0.017	15.6	0.5	1	23	1288	1310	1288	1310	0.98
22	25	0.0038	0.31	11.7	2.0	1	23	1316	1338	1316	1338	0.96
23	25	0.00025	0.021	15.4	0.3	2	23	1503	1525	1503	1525	0.97
24	25	5.2e-05	0.0043	17.5	0.3	2	23	1532	1553	1531	1553	0.96
25	25	0.084	7	7.5	1.2	2	22	1559	1579	1558	1579	0.92

Sequence Information

Coding Sequence: ATGGGCACCACTGAGATGAGTGAGATTGACCTTCAGGATGGTTCCTGTACTTTCACTGCCAATGTGATTGGAACTCAACTTCTCTTTTCACTTCCAGACGCAGCATCTCAGCAGTCggCTGAGTCTGCAATTGTTCTTGAAAATGGGGTCCAGTACATTCCGGTTTACGTGCAAGAAACTCTCCCGTCAAATGTTGTCAGCAGTTATGTCATTGATGAGTCACAGCAACTGCCTCTTCTCAATCACTCTCGTCAGATCATCCTCACCGAAGAACAAATCGTGACATTTAACCAAGTGACAACCTCCTCCATTTCGCAGAATGATTTCACTCAACATTTTCTCAGTTTGACAACTGATGAAGCCCAAGAAAAtgAATTTGACGTTCTGGATAATGGTAAAAAAGCTGCGATCATTGTAGAGAAGGATGATGTTTTAGCACTTGACAGTGCATCTGCACCCGCTGTTGACTACGATGCTGTTGATCCTCCAGACAATACTtgCCCCCAAGCATGTGACACCTGTGGATTGAGGTTTGAATCGAggaaactgttcaagaaacaTATTCTATCACATCTACATGAGAAGCCGTTTAAATGCCCGCATTGTCCTGAATCTTTCAACCACGAGTACAACTATATTCCCCACGTAGCTACTCACAACAAGAAAGATCCATTCTGCCCGGTGTGCAACAAGAGGTTCAGTCGCCTAGCTGGCCTCAAGGCGCACATTCTCATACATCAATGTGACGACACCCTCCCATGTCCTGAATGCTTGGAGGAATTCAGTAGCCAGAAACTCTTGGATGCCCATCGGCTCGAACATAAATCTGGTTTTGTGAGGATCCCTACTCGTTTTCATTACTGTACCAGTTGCGACGAAAAATTCGTTACCCGAGCTTTTCTAAAAGAGCACATCCAGGAAGTTCACAAGCTCAAGATGCCCAAGAAGATTAAAAAAGGGAAAGGCGGATACATATGCGAATTCTGTAAAAAACGTTTTGCAAAACCAAGTCAGTTGGTTCGGCATCGAAGAACTCATACGGGAGAAAAACCTTTCAAATGTGCGGAATGTGGTAAAGGGTTTGGCCAGAAGGGAAGTCTTCAAATTCACATGCTCAAACATTCTGGCGAACGACCTTACGCGTGCAAGTATTGTTCCTCTCAATTCAGCCAAAAAGgCAACCTCCAAGCTCACATTCTTCGTATTCACCCTGAGGAGAAGGACGAAATGAGGAATCGTCATTGTAAATTTTGTTCGTCTTCGTTCAGAAATATCGTTGGACTCCACAGTCACATGTCTCGACACCACGGCGTCGTTTATTCTTCTAAAAGAGGAAAgTCAATTACGTTCAACGAGCTGCCAAACCGAGAGGATGAAATTGTTGTAGACATTGCAATCATCGATAAAGATACGTCTAATAAAGAAAACGAGGGAAAGACGCTGGAATCTCCGGGTATTGTGATCGGCAACGACGAGCCGCGCCCAGCAAACGCCGAAGTTGAACCCAAGGGAAAACATTCGCCTGCCGAAGTCATCAACAAATGTAAACATTGTTCGAAAATGTTCCCAAAGCGCACTGATCTCGTCAAACATCTCAAAGTGCATGCTGAAGAAAAGAAGCAAAAGACTGAATATGTATGTGATTGCGGAAAACGCTTTCTATGCGAAACTAATCTCATGTGCCACGTGCAGTCAGCACACTCTGAAGAAGCCACTTGTGAAACGAGTCAATGCGAGTCCGTGAAGGACATAGAACACCACAAGAAGTGGAAACCTGACATGGCTGACCAGGAAGGTAGGAGCGAGGTGTCGCCTGTTTGTGATGTTGGAATTAATAATTCCGAGCAAGAACTAATCTTAGGGCCGAATCCACCGCCCATCCCTCTTTCTGGGCCATCTTCTGATCAGCCTGCGACATCAACTGCCATTGCCGTTACTTCGAATTCGAAAATCCTAGGAGACATCCCTCTTGAATGTGCCAAACTTCTCATTACTGCTGATGGCACAATTGAAGTCATTCATGGTGGTAACGTAGGAGAAACTAGCAAAGGAATTAAAACTGAAGTTTCCGAAGCAGCGGCTACAAAGAATGTTGCTTCAGGTAAAGAAGAGGGTGGAAGTGAGCAGTTCCTTGTGCAAGAAGTCATCGAAGAATCAACGAGAGTAGATGAAGATAACTCCAGGAAGTATAAATGTGACCATTGCAATCTCGCCTTCAAGCAGCAAAGCCATTGGAAGACACATTTAAGGATTCACACTGGCGAAAAACCGTATTCGTGTGAAACATGCCACAAGACTTTTGCTTCCAAAAGTGCGATGACGGTTCACATGGGAACGCATGACGAAGTGCCCGCCTTCAACTGTGAGGATTGTGGAAAAGCGTTCTCCACCGCTCGCAGTATGAGACGCCACATGGATTTGCACGTTCCTGGATTCCCCTACAACTGCTTCGTCTGCTCACGAGGTTACAAAACCAAAATGTCCTGGCAAAAACATCTAGCTACTCATTTGAAAATCACTCAGAAAGGAGACGAAGTCCAAAATATATCTGAAAACAAAGATACAAAAGCAGCTGACGGTGGCGCTGAATCTGGCCAAGCAGTAAATATGTGTAGCAGTGAACAAGCTAAGGATGATGGTGCCAGTGACCGCAAGAAAGCAGCTTCAAATGGCACTTTCCAAGGAGCCTGGAATGACCTCATACAGTCATTACAACCGGGACAATCTTTCAATTTCAACAGTACGCAAGAGGCCGCTTCAGCTGTTACATCGTCGTCAACAAAAACCACTCCGTCCAGTTCAAGTACTACTCGAACACCGAATGAGgtCCGGTTTTCTGGAGAAACTTGGAACGATGACAGTCAATTATTCAATGCTCAAGCGAATCAAGATTTTGATGGCTGTGTATTTTTACAAAATAGCGGAAATCTACCCACCAGCGTGCCCTCTGTAGTTTCAATCCCCACCCCTCCCCAAGCAAACACTCACCGCTGCTCCCTTTGTGACGTCAGTTTTGATAACCTCGTTGAGCTATCTATCCACAAGACGACGCACCTACAAGATAAATGGGCCACGTGCGCTACTTGTGACAGAATCTTCAGCTCTCTATCAGATTATCAGGCACACATGAGAGTTTGTCCACCATCGAATAACTCACAATCAGCAGACAAGGCAAATCAAGATTACTTGTGTATGGATTTTCTCGCCGCTTCAAAACTGCAGAAgTGTACTACCTGTGACATCCATTTTTTCCAACCGACGGACTACGTGATTCATGTTAACACTCATCATGGAGCGATAGCCTGCAAATACTGTACAGAGTGGTTCAAAACTGATGAGGAGATCAAGGCCCATCTCCAACAATGTCATGTAGTCGAATCACGATCCAATGAAGAAGACTCGGGATCTGGAGCTTCCAAAGAACACCAAAATACAACTGAAGTCACCAGTGTGGAGTTGGTGAATGTCGAGAGTGACGGCGATAAGAAATCGGTGAGCACTCGGGAGAGGTtggaactgaagagaaaaaggAATGCGTGGAGGCGACAAGCGATACTGCCCCTCACCGAAGAGGAACAATTGGCTATTGCCAAAGAGAGTCCTAGTTCTATATCTGAAAAAATTCTCCAGCAATCTATTTTACGTCTGAAGAAGGAACCCATCAAACAGGAACCTGAAACGGAAAAACACCCTAACCAATGTAAATACTGCCCTAAGAGCTTTCGCAAACCTTCAGATCTCGTTCGACACCTGAGAGTCCACACTGGCGAACGCCCTTACACTTGTACATCGTGTAACAAGTCGTTTTCGATCAAATCGACGGCTAAAAGTCACGTTAAAATCCACAAGAAGGAACAGGCGTATAGTTGCCACATTTGTAACAATTCTTTCGctgctattggaagtctcaaagtCCATATGAGACTTCATACTGGTGCCAGGCCGTTTGCTTGTGAACTCTGTCCAGCCAAGTTCCGCACTTCCGGTCATAGGAAGTCCCACATGTTTTCTCACCAAAAGAAAGAGTCAGCGAAGGACAAGGACAATATGTACTTGCCGTTACCTGTCGAGCAAGCCCCGTCGCCTCCTCGATCTCTGCCACCTCCTCCAAAATCACCAAAACTCCTTCCATCCGTCAAATACCTGAGAGACCAAGACTCCTTAGCGCCCGAATTCAACAAAACCGCTGAAAAATACATCGAGGTTTTGGAAGTTGACCCGCTCAAGAAACCCGCACCGAACAGTCAACTCCTCTTCTCTCTAGACAACGCTCTGAACTTTGGCGAGCGACCGGGTGAAGTGACTAATCAGCAATTCTTCCTGAAAGAGGTCAAAGGAGACGAACAGACTGGAACTGCAGCCCATTTCGTCGTGACGATGGGCGACGAAATCAACTACCAAGACAACATCAGCGACCTGTTGGAGTCTGTTCCCAACCTCAACGTTGATCCTGAAGACAACCTCGACCTCGATCTCGAAGTGTCCAGTAAACAACAGCTACATGAAACGTGCACCGTATGCGGAAAAGTGTTTGGTTCCAGTTTACTGTTGGATTCGCACATGAAGAAAGAACACTTTCCTAGTTCACTTCTTTCGTGTAACGTGTGCAAACAAACATTCAGGGGCAAAACTGACCTGGAAGTCCACATGTTGGTGCATGAACTGGACCAGCTGTCCTGCCACGCCTGCTCTCTCGAGTTCCCTGATGAAAGCGCTCTTCGGAAACACAAATGCACAAATGAAGATTCCGACATGAAAACTATGCCTTCAACTTCGCTCGACCTTGCATCTGTTGTTCATGAATTCTTCTCGTTTCCTACGTTATAG
Protein Sequence: MGTTEMSEIDLQDGSCTFTANVIGTQLLFSLPDAASQQSAESAIVLENGVQYIPVYVQETLPSNVVSSYVIDESQQLPLLNHSRQIILTEEQIVTFNQVTTSSISQNDFTQHFLSLTTDEAQENEFDVLDNGKKAAIIVEKDDVLALDSASAPAVDYDAVDPPDNTCPQACDTCGLRFESRKLFKKHILSHLHEKPFKCPHCPESFNHEYNYIPHVATHNKKDPFCPVCNKRFSRLAGLKAHILIHQCDDTLPCPECLEEFSSQKLLDAHRLEHKSGFVRIPTRFHYCTSCDEKFVTRAFLKEHIQEVHKLKMPKKIKKGKGGYICEFCKKRFAKPSQLVRHRRTHTGEKPFKCAECGKGFGQKGSLQIHMLKHSGERPYACKYCSSQFSQKGNLQAHILRIHPEEKDEMRNRHCKFCSSSFRNIVGLHSHMSRHHGVVYSSKRGKSITFNELPNREDEIVVDIAIIDKDTSNKENEGKTLESPGIVIGNDEPRPANAEVEPKGKHSPAEVINKCKHCSKMFPKRTDLVKHLKVHAEEKKQKTEYVCDCGKRFLCETNLMCHVQSAHSEEATCETSQCESVKDIEHHKKWKPDMADQEGRSEVSPVCDVGINNSEQELILGPNPPPIPLSGPSSDQPATSTAIAVTSNSKILGDIPLECAKLLITADGTIEVIHGGNVGETSKGIKTEVSEAAATKNVASGKEEGGSEQFLVQEVIEESTRVDEDNSRKYKCDHCNLAFKQQSHWKTHLRIHTGEKPYSCETCHKTFASKSAMTVHMGTHDEVPAFNCEDCGKAFSTARSMRRHMDLHVPGFPYNCFVCSRGYKTKMSWQKHLATHLKITQKGDEVQNISENKDTKAADGGAESGQAVNMCSSEQAKDDGASDRKKAASNGTFQGAWNDLIQSLQPGQSFNFNSTQEAASAVTSSSTKTTPSSSSTTRTPNEVRFSGETWNDDSQLFNAQANQDFDGCVFLQNSGNLPTSVPSVVSIPTPPQANTHRCSLCDVSFDNLVELSIHKTTHLQDKWATCATCDRIFSSLSDYQAHMRVCPPSNNSQSADKANQDYLCMDFLAASKLQKCTTCDIHFFQPTDYVIHVNTHHGAIACKYCTEWFKTDEEIKAHLQQCHVVESRSNEEDSGSGASKEHQNTTEVTSVELVNVESDGDKKSVSTRERLELKRKRNAWRRQAILPLTEEEQLAIAKESPSSISEKILQQSILRLKKEPIKQEPETEKHPNQCKYCPKSFRKPSDLVRHLRVHTGERPYTCTSCNKSFSIKSTAKSHVKIHKKEQAYSCHICNNSFAAIGSLKVHMRLHTGARPFACELCPAKFRTSGHRKSHMFSHQKKESAKDKDNMYLPLPVEQAPSPPRSLPPPPKSPKLLPSVKYLRDQDSLAPEFNKTAEKYIEVLEVDPLKKPAPNSQLLFSLDNALNFGERPGEVTNQQFFLKEVKGDEQTGTAAHFVVTMGDEINYQDNISDLLESVPNLNVDPEDNLDLDLEVSSKQQLHETCTVCGKVFGSSLLLDSHMKKEHFPSSLLSCNVCKQTFRGKTDLEVHMLVHELDQLSCHACSLEFPDESALRKHKCTNEDSDMKTMPSTSLDLASVVHEFFSFPTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00930594;
90% Identity: -
80% Identity: -