Llin010034.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- Su(H)
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000003.1:35791350-35792534[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-68 5.7e-64 214.5 0.0 1 123 204 326 204 326 0.99
Sequence Information
- Coding Sequence
- ATGCCCCATCAGTTTGGAATGGCCCACAGCCTCCCCAATCCTGTGGAGAGGTACATATACAGGAGCACCGATGAGCAGAGACTCACGCGAGAAGCGATGGAGCGCTATCTTCGTGAGCGGAGCGACATGGTTATTGTTATCCTTCACGCTAAAGTTGCACAGAAATCTTACGGTAATGAGAAGAGGTTTTTCTGTCCACCGCCATGTATATATCTGTATGGAGAGGGCTGGAGACTGCGGCAGGAGCAGCTCCTGCGCGAAGGTGATTCGGAGCATGCTGCACAGCTGTGTGCTTTCATCGGAATTGGTAATTCTGACCAGGACATGCAGCAACTCGACCTCAACAACGGGAAACAGTACTGTGCCGCCAAAACGCTATATATATCTGACTCTGACAAGAGAAAACATTTCATGCTTTCTGTAAAAATGTTCTATGGTAGTGGCCATGACATTGGTGTCTTTCAAAGTAAACGCATCAAAGTGATATCGAAACCTTCTAAAAAGAAGCAGTCTTTGAAGAATGCGGACTTGTGCATAGCTAGTGGTACTAAAGTTGCTCTATTCAATAGGTTGCGGTCTCAGACTGTTAGTACGAGGTACCTTCATGTTGAGAATGGTAATTTCCATGCCAGTTCAACTCAATGGGGAGCGTTCACGATACATTTGTTGGATGATGAAGAGAGTGAGAGTGAAGAATTCAGTGTTAGAGAAGGATATGTGCATTACGGGAGCACAGTGAAGCTTGTTTGTTCTGTTACGGGTATGGCACTTCCGCGTCTCATCATCCGAAAAGTCGACAAGCAAATGGCATTACTTGAAGCGGACGATCCAGTCTCCCAGCTCCATAAATGCGCCTTTTACATGAAGGACACTGAAAGAATGTATCTCTGCTTATCCCAAGAGCGCATAATCCAGTTTCAAGCAACTCCCTGCCCAAAAGAACCGAACAAGGAGATGATCAACGATGGGGCCTGCTGGACCATCATTAGCACGGACAAAGCGGAGTATCAATTCTACGAGGGTATGGGTCCTGTAAGGACTCCTGTAACTCCAGTTCCTATCGTCCACAGTCTTCATTTGAATGGAGGAGGTGATGTGGCTATGCTCGAGCTCTCTGGTGAGAACTTCACGCCCAACCTTCAAGTCTGGTTTGGAGATGTGGAAGCCGAGACTATGTACAGGTAA
- Protein Sequence
- MPHQFGMAHSLPNPVERYIYRSTDEQRLTREAMERYLRERSDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLYGEGWRLRQEQLLREGDSEHAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGSGHDIGVFQSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDEESESEEFSVREGYVHYGSTVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGACWTIISTDKAEYQFYEGMGPVRTPVTPVPIVHSLHLNGGGDVAMLELSGENFTPNLQVWFGDVEAETMYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883557; iTF_00808042; iTF_00442291; iTF_01131993; iTF_00714905; iTF_00763652; iTF_01108199; iTF_00386058; iTF_00165006; iTF_01479214; iTF_01500110; iTF_01009327; iTF_00372656; iTF_00742544; iTF_01365168; iTF_00339665; iTF_01309142; iTF_01478647; iTF_01298168; iTF_00757113; iTF_01095613; iTF_00792734; iTF_01301406; iTF_00154271; iTF_00743455; iTF_00145312; iTF_00727101; iTF_00644801; iTF_00051523; iTF_01372071; iTF_00139005;
- 90% Identity
- iTF_00763652;
- 80% Identity
- iTF_00883557;