Llin022122.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- YPTM1
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000010.1:30722195-30725737[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-05 0.73 10.8 0.1 14 41 60 87 58 91 0.88 2 3 3.8e-06 0.059 14.3 1.8 8 45 93 130 88 142 0.89 3 3 0.031 4.8e+02 1.8 0.1 12 24 153 165 150 175 0.82
Sequence Information
- Coding Sequence
- ATGGCCGTTGAGTGTCAAGCGACGTTCAAAGTGCTCGTTCTGGGAGACTCCAACGTCGGCAAGACATGCATCGTCCACAGATACTGCGATGAGACCTACTACGACACATACATATCCACCATAGTTGATGTCGTGGAGCTGCCGAAAGACGTCGGGTGTCAAACTGACTTGCAGAATCAAGAAGTCGCAGGACTGAGAGCGAAGATTGAAGATCTCGCGAAGAACAACAACCGGCTGACTGAGCAAAGTTCGTACCTCAGCAAACAAGCGATTTTTCTGACAGTTGCGCGGAATCAAGAACTCGCAGAACTGAGAGCGAAGATTGAAGATCTCGTGAAGAACAACAACCGGCTGAGTGAGCAAAATTCATCCCTCAGCAAACAAGCGAATTTTCTGACAGTTGCGAGTGAAAAACTCCGATCGGAGCGTGATATGTTACATAAGGACAACTTGAGCCTTCGCGGAGAGGTTGAACAATTGAAACAAGATTTGAAACACGTTTCTCTCGACGAAACTAGCTTGAAAGGTGATGATGACAAAACTAAATACTATACCGGCATCCCTTCttatgatttattgaaaatcgtGTACGATTTAGTGGAATGCGAGCTGCCGCATACGTACAGGAATTCCATGCCGAAATTCAGTGAATTTATATTGACGATGATGCGATTACGTTTAGGGTCTTCGGGAACGGATTTGGGCTACCGGTTTAATATTTCACAATCCACTGCTAGTTGCATTTGTTCGAGGTGGTTTAAAGGCATGTCTGCCAGGTTGAGTAGCACCATTACGTGGCCCGATCGTGATGAATTACGAAGAACAACGCCTGATTGTTTCAAGGACGTATTCGGTGATAGATTTACGGTAATGATAGACTTTTTCGAGTTATCAATCGAAAAGCCGTCGTCTAAATCGGCCAGGGCTGAAACTTGGTCTGTTAGTAAAAACCATCACACTGCGAAATTTCTGATAGGGCTCACTCCTCAGGGCAaagtgtgtttcatttctgaaGCATATGGTGGAAGGGCGTCTAATAAGCAAATTACGATAGAATCAGGGTTTTTAGATAAGCTACAACCTGGAGATGTCGTCCTCACCGACCAAGGCTTAGACTTAGACGGGCACGTCGGAATGAAACAAGCCAAAAGCGAAATCATGGCTTTTACCAAAGGCGAATCGCAGTTATCTTTTGACAACgttaaaaaaaccaaagaaattgCGAAATTGAGATTGCTTATGGATAGAGCGATGGGATTGTTGAaacttaaattcaaaattctgggTGGATTTTTCCCTTCTAACCACCGTTCGTCAGCGACAGATGGAACACCTACCGCCGATCAGGTTTTAAAGATTTGTTGTGGATTAGTTAACTGTTGTGGATTAGTCCCGTCCCTGATTCGAGAACAAGACGACTTGGTGCTTGTATATATTGGAGATGACGTTGCATCACAACAACCTTCAGAACTCCTTCAAGAAGTCGAAGATagttga
- Protein Sequence
- MAVECQATFKVLVLGDSNVGKTCIVHRYCDETYYDTYISTIVDVVELPKDVGCQTDLQNQEVAGLRAKIEDLAKNNNRLTEQSSYLSKQAIFLTVARNQELAELRAKIEDLVKNNNRLSEQNSSLSKQANFLTVASEKLRSERDMLHKDNLSLRGEVEQLKQDLKHVSLDETSLKGDDDKTKYYTGIPSYDLLKIVYDLVECELPHTYRNSMPKFSEFILTMMRLRLGSSGTDLGYRFNISQSTASCICSRWFKGMSARLSSTITWPDRDELRRTTPDCFKDVFGDRFTVMIDFFELSIEKPSSKSARAETWSVSKNHHTAKFLIGLTPQGKVCFISEAYGGRASNKQITIESGFLDKLQPGDVVLTDQGLDLDGHVGMKQAKSEIMAFTKGESQLSFDNVKKTKEIAKLRLLMDRAMGLLKLKFKILGGFFPSNHRSSATDGTPTADQVLKICCGLVNCCGLVPSLIREQDDLVLVYIGDDVASQQPSELLQEVEDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -