Ltri003927.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000483.1:3578-6573[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 3 1.4e+04 -5.0 1.9 15 19 166 170 166 170 0.85 2 17 0.2 9.3e+02 -0.3 0.4 4 10 201 207 200 207 0.95 3 17 2.1e-07 0.001 18.8 17.3 1 19 215 232 215 232 0.99 4 17 1.1e-09 5.3e-06 26.0 13.5 1 19 268 286 268 286 0.98 5 17 2.3e-07 0.0011 18.6 12.8 1 19 321 339 321 339 0.99 6 17 1.9 9.1e+03 -3.5 1.0 5 10 363 368 363 368 0.86 7 17 9.7e-07 0.0046 16.6 11.5 1 18 374 391 374 392 0.96 8 17 5.2e-05 0.25 11.1 16.8 1 18 426 443 426 444 0.94 9 17 1.7e-09 8.1e-06 25.4 10.7 1 18 453 470 453 471 0.97 10 17 1 5e+03 -2.6 1.1 5 10 499 504 499 504 0.94 11 17 0.0002 0.96 9.2 4.1 9 19 519 529 517 529 0.91 12 17 0.013 62 3.4 4.4 1 12 539 549 539 549 0.90 13 17 3 1.4e+04 -4.3 2.7 14 18 577 581 577 582 0.85 14 17 0.52 2.4e+03 -1.7 1.2 6 10 608 612 607 612 0.85 15 17 0.0013 6 6.7 4.9 1 11 618 628 618 629 0.97 16 17 0.0031 15 5.4 17.6 4 19 660 675 658 675 0.93 17 17 2.7e-05 0.13 12.0 13.9 1 18 718 737 718 738 0.89
Sequence Information
- Coding Sequence
- ATGAACCATCAACAAAAACCCCGAAATCCTtggaataaaaaacaacaacaacaaccatctGGTAGAAATCAAGCCGGTAAACAGAAGAATTCAAATCCAACACCGTctgaattgaaattcaaaGAAGCACAAGTCAAATTACAAGCAGCTGTTGAGAAACATTTGAAAGATTACGAATCTTCATCATCCGAAGATGAATTAGAATCAGATAATCTTATCGatggaattataaagaattacaCACAAACTGGTGGTGGAGATGAATATCTGGAACGTACAAAGGCTTTCTTACAGGATACGTTGATATCCGGTGCtgcaatttgtttgatttgtatttcACGAATTAAACGTGAATCAGCTATTTGGAATTGTGCggaatgttattgttttttccatCTCGATTGTATACAGAAATGGTCAAAAGATTGTATGTTCCAACAGAAACAAATAATCGACAATTCCgtcaatataaaacaaaaatcaccaaCATGGGGTTGTCCGAAATGTCGTCACAATTATCAACTTGACGATATCCCAATAAATTACTATTGTTTCTgtcataaaacaataaatcccCAATATCAACCATTATTAGTGCCACATTCATGTGGGGAAATTTGtcgaaaaaatttaaaaccatTATGTGGACatcaatgtttattattatgtcaTCCAGGACCATGTCCACCATGTCCAGTTACaatcaatataaattgttattgtggTAAACAACCACCAAAAATACAAAGATGTTGTAATAAAGAATGGTCGTGTGGTGAACGttgtggtaaattattaatatgcGGTAAACATTCATGTTCGGAAGCATGTCATGCTGGTGATTGTCCACCATGTTCGAAAAAAAGCTTACAGAAATGTTTATGTaagaatcaacaaaaattacgtGATTGTTCATCGCCGATATGGCAATGTGATAAAatttgtAACAAACCTTTAGATTGTGGTAATCATAATTGTTCGATTGTTTGCCATTCAAATGATTGTGGACCATGTCCTTTAACTTTACCAAGAACTTGTCCGTGTGgtaaaacaaaatatcaacTACCTTGCACTAAAGAGACACCAACTTGTCCGGATACTTGTGGTAAATTGTTGGATTGTGGCCAACATACTTGTAATCAAAGATGTCATAAAGATGATTGTGGTTTGtgtttagaaattgttgaaaaacgcTGCAGATGCAACCAACATTCCAAACAagttaattgttataaaccgTACTTTTGTGAAactaaatgtaaacaaatgCGGGATTGTAATCGACATCCGTGTAATCGGAAGTGTTGTGATGGTAATTGTCCACCATGTGAAAAACCATGTGGTCGTACATTAAATTGTGGTAGTCATAAATGTAATTCCGTATGTCATCGTGGTCTTTGTTATCCATGCAATCAAACCGATACGGTAACTTGTCGATGTGGTGTAACGAAATTAACTGTTTCTTGTGGACGTAAGAATCGTACAAAACCACCAAAATGTAGCAAACTTTGTTTaatacCACCGGATTGTCATCATGAAAAACGGGAAGCCCATAAATGTCATTTTGGTGATTGTCCATCATGTCgacaaatttgtaataaattacgaTCAACTTGTTCACATCCATGTCCAGCTATATGTCATTCAgtggtttttgttaaaattgaaggACAGAAAGCTTCAATGCCATGGGAACAAACCGGACCACAAATCGAAAGAAAATCACTACCATGTCCTGATTGTTTAGTCCCTTTACCAGTTACATGTTTAgGTGGACATGAAACTACAAATTGGCCTTGTTATATGGCGAAACCATCAAGTTGTCAAAGACCTTGTGGTAGACTTCTTGATTGTGGCAATCACATTTGTACATTATCATGTCATCTAGTAGAAGACGCTCCAGATCATTTGAAAGCTGGTAAAAATTGCGAAATTTGTGAAAGTGGCTGTACTAAAGAACGTCCAGATGGTTGTCCACATGATTGTCTAAAACCATGCCATCCGGATCCTTGTCCACCATGTAAACAAATGATCCGCATCCGGTGTCATTGCGGTCTTAATCAACCATACATTCCATGTTATTTATGGTTAGATCCGGATAAACGTGAAGAAATCCAAAGTTGTGGCAATCAATGTCCTAAAAATTTTAATTGTGGACATCGTTGTCGTACTAATTGCCATTCTGGTCCATGTCCTAATCCGGAATCGTGTAAGAAAAAGGTGAAGATTTCATGTAAATGTAAACGGATCAAAAAAGAATTTTCCTGTGAAATTGTACGTAATGGTAATGCAAAAGTTGATTGTGATGACATCTGTAAACAGAAATTGGAAGAACAACGTAAAGAACAGGAAGCtattaatgaacaaaaacgACGAGaggaagaaataaaaaatcagAAAGAATTGGAAAAATACCAAAAGATGTTTGAAGGTAAGAAGAAGAATCGTGAACGACGCATCTATAAAGAAGAACAACAGGACAGTTTTTTGAAGAAGTATAGAGTTGGTTTTGTTGCAGCTACAGGAGCACTCTTAGCTATTTTAgttgtttatgttttcttctaa
- Protein Sequence
- MNHQQKPRNPWNKKQQQQPSGRNQAGKQKNSNPTPSELKFKEAQVKLQAAVEKHLKDYESSSSEDELESDNLIDGIIKNYTQTGGGDEYLERTKAFLQDTLISGAAICLICISRIKRESAIWNCAECYCFFHLDCIQKWSKDCMFQQKQIIDNSVNIKQKSPTWGCPKCRHNYQLDDIPINYYCFCHKTINPQYQPLLVPHSCGEICRKNLKPLCGHQCLLLCHPGPCPPCPVTININCYCGKQPPKIQRCCNKEWSCGERCGKLLICGKHSCSEACHAGDCPPCSKKSLQKCLCKNQQKLRDCSSPIWQCDKICNKPLDCGNHNCSIVCHSNDCGPCPLTLPRTCPCGKTKYQLPCTKETPTCPDTCGKLLDCGQHTCNQRCHKDDCGLCLEIVEKRCRCNQHSKQVNCYKPYFCETKCKQMRDCNRHPCNRKCCDGNCPPCEKPCGRTLNCGSHKCNSVCHRGLCYPCNQTDTVTCRCGVTKLTVSCGRKNRTKPPKCSKLCLIPPDCHHEKREAHKCHFGDCPSCRQICNKLRSTCSHPCPAICHSVVFVKIEGQKASMPWEQTGPQIERKSLPCPDCLVPLPVTCLGGHETTNWPCYMAKPSSCQRPCGRLLDCGNHICTLSCHLVEDAPDHLKAGKNCEICESGCTKERPDGCPHDCLKPCHPDPCPPCKQMIRIRCHCGLNQPYIPCYLWLDPDKREEIQSCGNQCPKNFNCGHRCRTNCHSGPCPNPESCKKKVKISCKCKRIKKEFSCEIVRNGNAKVDCDDICKQKLEEQRKEQEAINEQKRREEEIKNQKELEKYQKMFEGKKKNRERRIYKEEQQDSFLKKYRVGFVAATGALLAILVVYVFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366724;
- 90% Identity
- -
- 80% Identity
- -