Basic Information

Insect: Lydus trimaculatus
Gene Symbol: -
Assembly: GCA_037414755.1
Location: JAZBGY010002263.1:251-3228[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.5 9.7e+03 -3.6 0.7 19 23 4 8 4 10 0.90

2 14 5.1e-05 0.052 13.3 0.4 14 37 159 183 153 188 0.72

3 14 0.0079 8.1 6.2 2.3 17 29 188 200 181 208 0.75

4 14 0.0083 8.5 6.2 1.8 6 37 206 232 201 238 0.76

5 14 0.065 66 3.3 1.2 18 36 244 259 234 266 0.82

6 14 0.00035 0.35 10.6 0.9 16 41 270 292 260 293 0.84

7 14 0.0091 9.3 6.0 0.4 19 30 301 312 296 322 0.86

8 14 0.00045 0.45 10.2 1.1 12 41 344 370 339 371 0.85

9 14 0.00011 0.11 12.2 0.8 6 40 367 396 366 399 0.87

10 14 0.049 49 3.7 1.1 19 40 406 424 402 427 0.87

11 14 1.1 1.2e+03 -0.7 0.1 19 29 434 444 432 450 0.83

12 14 0.035 35 4.2 1.7 5 34 449 478 445 483 0.75

13 14 0.02 20 5.0 0.6 8 27 480 498 475 512 0.78

14 14 0.13 1.3e+02 2.4 0.9 17 29 516 528 505 542 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.5	9.7e+03	-3.6	0.7	19	23	4	8	4	10	0.90
2	14	5.1e-05	0.052	13.3	0.4	14	37	159	183	153	188	0.72
3	14	0.0079	8.1	6.2	2.3	17	29	188	200	181	208	0.75
4	14	0.0083	8.5	6.2	1.8	6	37	206	232	201	238	0.76
5	14	0.065	66	3.3	1.2	18	36	244	259	234	266	0.82
6	14	0.00035	0.35	10.6	0.9	16	41	270	292	260	293	0.84
7	14	0.0091	9.3	6.0	0.4	19	30	301	312	296	322	0.86
8	14	0.00045	0.45	10.2	1.1	12	41	344	370	339	371	0.85
9	14	0.00011	0.11	12.2	0.8	6	40	367	396	366	399	0.87
10	14	0.049	49	3.7	1.1	19	40	406	424	402	427	0.87
11	14	1.1	1.2e+03	-0.7	0.1	19	29	434	444	432	450	0.83
12	14	0.035	35	4.2	1.7	5	34	449	478	445	483	0.75
13	14	0.02	20	5.0	0.6	8	27	480	498	475	512	0.78
14	14	0.13	1.3e+02	2.4	0.9	17	29	516	528	505	542	0.80

Sequence Information

Coding Sequence: atggatTTGTGTCGTTTATGCCATTTAGAAACACCCCCAAATTTTGGTAAGGATTTATATTTCAATGGAAATCGCTATCCTCAAAtacttgaaattgttgaaattttaactgGAATCAAAATATATGAGACTGATCCATTTCCAAAAATTGCATGTACTGATTGTTAtgagaaattgataaatttttataattttcgtaatttaatcTTACAAGCCGATTCGAAATTTCATCAAGAACTGTACAcgaacaatacaataaatgcAGTTAAAGTTGAAGTAGAAGAGCCCCCATTTGGATCTGAGAAAGAAGAACCAAACGAGCAGACAACTgtgaataacaataacaatcaagaattagatgatgatgaaaggAAAAATCTGATAGAACCTTCTAAATTGAAAACTGAGGAACAACTCCTTCCAATCGATGAAAACCAATTAAATCTTGataaagaacaaacaaaaccaacaactgGAGAGgtttataattgtaatttttgtgaaaaaactTTCTCATATCAATCAGAATTCACAACACATTTACGTTTacattataaatcaaaaacatgcaatatttgtaataaaacatttacaacaaaacgttATTTAAAAACACATCTAGATATACATAGagataagaaatatttttgtaaaatttgtggTAAATCATTTCGATTAAGTGCAAATTTATCAACACATAAAAAAGTACATACCGGTGAACGGCCACATgaatgtttgatttgtttaaagaaaTTCACATCAAGTACAACATTAAAAGTACATCAACGTATACATACTGGTGAAAAACCGTATCATTGTAATACGTGTggtaaacaattttcattcagTCAAAATTTTAAAGTCCATTTAAGAACACATACCGGTGAACGACAGTATTTGTGTGATATTTGTggtaaaaattacacaaatagtGGCTCTTTAAGAGTACATAAAAGAATCCATAATATTGGTACAGAGAAAGATTGTAGGATTTCAGATAACACTTATTCTGTATTAGAATCATTAGAGactaatgaaaaattgtttatctgTAAGATTTGTAATGAAACTTACAAAGATAAAACTTCATTAATCGAACATATACAGTCGCATAGTGATGGTAAATTCGTTTGTGAATTTTGTAGTAAAATTTTTACACAACGTAAAAATCTATATGCACATCTAGCAAAACATAAAGGTGGCAAACCGTATCCATGTacgatttgtaataaaatatttcgatGTGCGGCAAATTTAAGTAAACATCTAAGAGTACATAGTGGTGAAAGACCGTTCTCTTGTGAATTATGCGATGCAAAATTCTCTGAAAAAGCTACATTAAAAGTACATTATCGTATACATAATGATGAGAAACCATACACATGTTCGATATGTAATAAAGGTTTTCGAGTAAAATGTGCTTTAACTGTACATTTACGCGCGCACACTGATGAGAAACCGTACActtgtaatgtttgtaataaaagttttagaGTAGGTGCTGCTTTGAATGAACATATGGTAACGCATACTGGGAAAAAACCGTTTGTTTGTGAGATTTGTAATAAGAGCTTTTTAAGAAAATATCTATTGGCTAGACATCAGAAAAAGCATATAGAGAAAAATAATGAGACAATGGAAACGGATAAAAGCTTCGAATAA
Protein Sequence: MDLCRLCHLETPPNFGKDLYFNGNRYPQILEIVEILTGIKIYETDPFPKIACTDCYEKLINFYNFRNLILQADSKFHQELYTNNTINAVKVEVEEPPFGSEKEEPNEQTTVNNNNNQELDDDERKNLIEPSKLKTEEQLLPIDENQLNLDKEQTKPTTGEVYNCNFCEKTFSYQSEFTTHLRLHYKSKTCNICNKTFTTKRYLKTHLDIHRDKKYFCKICGKSFRLSANLSTHKKVHTGERPHECLICLKKFTSSTTLKVHQRIHTGEKPYHCNTCGKQFSFSQNFKVHLRTHTGERQYLCDICGKNYTNSGSLRVHKRIHNIGTEKDCRISDNTYSVLESLETNEKLFICKICNETYKDKTSLIEHIQSHSDGKFVCEFCSKIFTQRKNLYAHLAKHKGGKPYPCTICNKIFRCAANLSKHLRVHSGERPFSCELCDAKFSEKATLKVHYRIHNDEKPYTCSICNKGFRVKCALTVHLRAHTDEKPYTCNVCNKSFRVGAALNEHMVTHTGKKPFVCEICNKSFLRKYLLARHQKKHIEKNNETMETDKSFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00929761;
90% Identity: iTF_00929761;
80% Identity: iTF_00929761;