Basic Information

Insect: Lydus trimaculatus
Gene Symbol: Hr39
Assembly: GCA_037414755.1
Location: JAZBGY010004713.1:214-2815[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.11 4e+02 -0.2 2.9 46 116 186 260 89 277 0.59

2 3 1.8e-08 6.5e-05 22.2 0.1 1 28 383 410 383 503 0.74

3 3 3.9e-73 1.4e-69 235.2 0.1 206 408 522 719 502 719 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.11	4e+02	-0.2	2.9	46	116	186	260	89	277	0.59
2	3	1.8e-08	6.5e-05	22.2	0.1	1	28	383	410	383	503	0.74
3	3	3.9e-73	1.4e-69	235.2	0.1	206	408	522	719	502	719	0.97

Sequence Information

Coding Sequence: aatttattaacaaatggtGATATTTTGGATAATTCAGCAGATGCTGAAGTTGCACAAATCGATTTTCAATGTACTGTTAATATGCGACATAAAAAGAAACGTGATGGTAGTAGTTGTAgtggtgttgttggtggtggtaataataataatagtagtggtAATAATGATACATCAATACCAAGACCTATGTCATGGGAAGGTGAATTATCTGATCATGAACGTGATATGtgtattgatgatgatcaCGGATCTCAGATACCTGagaatttatcattatcacaatcgaaaacaacaacaggtaGTTTAGATTTAAAAGATAGTCCAATATTGAGattgaaacaacaaccaacaacaattagtaatTATTCATTACATAGTACACCAAGTAATTCACCATTATTAAGTCAACGACATAGTGTTGTTactagtggtggtggtggtgttataCCATCAACAATTATCAGTCATAAAGATTTAAtgcataaaacaataaatgtacCACCAACACCAAGTCCAGATTCAGCAATACATTCAGCATATAGTGTATTTAGTTCACCAAATCAAAGTCCATTAACACAAAGACATATAACATTAACACCAAATTTAAGTCGTAATAATAGTGATGCATCACATTCAAGTTGTTGTAGTTATTCGAGTGTTTCTGTATCTGTATCACCAACACAACAATTCTCACCTACACATAGTCCTATACAGgGTCGCCATATGCACAATATCCATAATAGTCCTTTACATCACAATGTTTTATATAGAAGTTTACAAGAtgatcaaacaacaatacaatataataatgaacatgatggtggtggtggtagtagtggtagtcTTCTTGATGATATTGAAGATAAGACTGGTTTAATTCATACATCATCATTACCAGCCCAACCTGGTATATCaagacaacaattaattaatagtccATGTCCTATATGTGGTGATAAAATATCTGGTTTCCATTATGGTATATTTAGTTGTGAATCATGTAAAGGTTTCTTTAAACGTACAGTacaaaatcgtaaaaattATGTATGTTTACGTGGTGCTGCATGTCCTGTTACTGTTGCAACTAGAAAAAAATGTCCAGCTTGTCGATTCGATAAATGTTTACAATGTGGAATGAAACTTgaagcTATTAGAGAAGATCGGACACGTGGTGGACGTTCAACTTATCAATGTTCATATTCATTACCACCATCATTAACAAATCATACAGAATTACGTGCTAGTACAAATGATTTACGTCAAAATTTCAGTGATTTACATCATGGTAATTTAACTGTAAAATTGGAACCTGgtgataattgtttaacaacaacaacaacacatcaTAAACGTAATAGTAGTACTGTACCGGGTTCTAAAGGTGTCCCAGCATTATTGCAAgaGATAATGGATGTGGAACATCTGTGGCATTATAATGAAGTTGaactaaataaattaagtACTGAAGGACATTTAGGTAGAGAAGGTACAAGTGGTGCTGTTCATAATCTATCAAATCATCCATTATTAGTTGGTACAGCATTAGCTGGTACAACAGATACAAATCCTgattttgttgcaaatttatGCAATATAGCCGATCGtagattatataaaattgttaaatggTGTAAAAGTttaccattatttaaaaacatatcgattGATGATCAGATTTGTCTATTAATCAATTCCTGgtgtgaattattattattctcctGTTGTTTTCGTTCAATGTCAACGCCAGGTGAGATCCGTGTATCATTAGGTAAAAGTATAACATTGAATCAAGCAATTGATATGGGTATGCAAGCATGTATTGAACGTATGTTGAATTTTACGGAACAATTACGACGTTTACGTGTCGATCAATACGAATATGTAGCTATGAAAGTTATAGTTCTACTAACATCAGATACATCAGGATTACGTGAAGCTGAAAAAGTGCGTGCATCACAAGAGAAAGCATTGAAAGCATTACAAGATTACACATTGTGTCATTATCCGGATAGTCCAGCAAaatttggtgaattattattgcGTATACCTGAACTACAACGTACTTGCCaaGTGGGGAAAGAGATGTTGACGATTAAATCAAAAGATGGCGATGGTCCCAGTTTTAATCTATTAATGGAATTGTTACGTGGCGATCATTAG
Protein Sequence: NLLTNGDILDNSADAEVAQIDFQCTVNMRHKKKRDGSSCSGVVGGGNNNNSSGNNDTSIPRPMSWEGELSDHERDMCIDDDHGSQIPENLSLSQSKTTTGSLDLKDSPILRLKQQPTTISNYSLHSTPSNSPLLSQRHSVVTSGGGGVIPSTIISHKDLMHKTINVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNIHNSPLHHNVLYRSLQDDQTTIQYNNEHDGGGGSSGSLLDDIEDKTGLIHTSSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHTELRASTNDLRQNFSDLHHGNLTVKLEPGDNCLTTTTTHHKRNSSTVPGSKGVPALLQEIMDVEHLWHYNEVELNKLSTEGHLGREGTSGAVHNLSNHPLLVGTALAGTTDTNPDFVANLCNIADRRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLNQAIDMGMQACIERMLNFTEQLRRLRVDQYEYVAMKVIVLLTSDTSGLREAEKVRASQEKALKALQDYTLCHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00753059;
90% Identity: iTF_00929601;
80% Identity: iTF_00929601;