Ltri009501.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- Cep290
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010002051.1:9045-10902[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2e-06 0.0094 15.8 2.1 13 41 2 30 1 40 0.90 2 5 0.00015 0.71 9.8 0.6 17 38 41 62 36 65 0.89 3 5 0.0048 23 4.9 0.1 16 40 87 111 82 117 0.82 4 5 0.0017 8 6.4 5.4 13 54 129 170 127 177 0.93 5 5 0.049 2.3e+02 1.7 0.8 33 33 182 182 162 222 0.53
Sequence Information
- Coding Sequence
- ATGCGTTCAGAAATTGAACGTTTACaaaacacaataacaacattacaaaaaacaaatctatcatTAGAAGCTGAAAATCtcgatttaaaattagatttagaaaaattcaaaaaagaaacaccacATTTACGtgaacaaattcaacatttagaAAGtTATATTGAagtattgaaaaatgaaaacgtTCAAAAagatattaatgatgatggtagcaGTAAAGAACTGTCAACAACAGATCCACGAGCAACATCAAAGAAAATTTCTGAATTAGAACGAACGATTTTCGTTTTGAAACGTGTAGTAGAGAAGTTACAAGTTGAAAATAAACGTTTGGTTAGTGGTAAACGTCCCTATCCTGAACGTTGtatttctaatgataaattacGTGAAGATTATCAACGTCTTAAAGAACAATATCATGAGAGTTTACAGAAAATTACagatttacaaaatgaattaaaagaattgaaaattgctgaaaattcaGATAgtgtaaacaaattaaaagaattagaagaacaattggaacagaaaaataaattattggatAAAGTTCGAGTATTAATGCATCGAGCTGCTAAAAAAGAGAAAACACTACAAAAAGAAATAGCTAGATTGAAGGGACAACCGGACGATACGATTGAAGAACTACCGGAAACACTggatatttaa
- Protein Sequence
- MRSEIERLQNTITTLQKTNLSLEAENLDLKLDLEKFKKETPHLREQIQHLESYIEVLKNENVQKDINDDGSSKELSTTDPRATSKKISELERTIFVLKRVVEKLQVENKRLVSGKRPYPERCISNDKLREDYQRLKEQYHESLQKITDLQNELKELKIAENSDSVNKLKELEEQLEQKNKLLDKVRVLMHRAAKKEKTLQKEIARLKGQPDDTIEELPETLDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -