Lpor026009.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lycophotia porphyrea
Gene Symbol
-
Assembly
GCA_950005105.1
Location
OX465412.1:2365181-2367520[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.012 13 6.6 2.6 18 43 9 31 6 32 0.94
2 20 0.08 84 4.0 0.3 17 44 36 60 32 60 0.80
3 20 0.0033 3.4 8.5 0.1 18 43 68 90 65 92 0.84
4 20 7.7e-05 0.08 13.7 1.5 17 44 98 122 95 122 0.91
5 20 0.00049 0.51 11.1 1.2 18 44 129 152 127 152 0.94
6 20 6.8e-05 0.071 13.9 1.5 14 43 156 182 153 183 0.89
7 20 0.0043 4.5 8.1 0.4 18 44 189 212 185 212 0.90
8 20 0.0096 10 7.0 0.9 18 43 220 242 214 243 0.82
9 20 0.35 3.7e+02 2.0 0.6 17 44 254 278 241 278 0.78
10 20 0.33 3.5e+02 2.1 0.6 15 43 300 325 284 326 0.78
11 20 7.3 7.6e+03 -2.2 0.1 18 28 333 343 331 350 0.77
12 20 0.27 2.9e+02 2.3 0.0 15 26 359 370 355 377 0.83
13 20 0.15 1.6e+02 3.2 4.1 16 43 405 429 397 430 0.86
14 20 0.9 9.4e+02 0.7 8.3 6 30 424 452 420 459 0.72
15 20 0.0025 2.6 8.8 2.5 14 43 461 487 450 488 0.79
16 20 0.076 79 4.1 0.8 17 44 493 517 489 517 0.85
17 20 0.7 7.3e+02 1.0 1.4 18 28 524 534 520 547 0.77
18 20 3.2 3.4e+03 -1.1 0.6 19 43 555 576 551 577 0.73
19 20 6.9e-05 0.072 13.8 1.9 5 43 605 642 604 643 0.85
20 20 1.1 1.1e+03 0.4 0.6 15 40 660 687 651 702 0.84

Sequence Information

Coding Sequence
ATGTACACAAATCAACTGGATTTCGTGTGCGACTACTGTTCGAGGACTTTCACAAGAAAATATAACTTACAGACTCATATAGAAAACTGTCATATAAATTCTTCGTGTCACTGTGATATTTGTGGCCAGAATTTTGGTAGTCCAGCCGGATTACTACAACATTTATCCCGGGGACACAATAATTATGGGCAGCCATTCCCAGAATGTGAACTGTGCGGTCGAATTTTTACAAGGAAACAGAATATAAATTCTCATATGATAACTGTCCATCTACAGGGATTAGGATATGAAATTCGCTGCCGTTTGTGTGAGAAAACCTTCACAACGGAAAGGAATTTAAAAAGACATATAAACCAATTGCATAATCCCGATGTTGAATATCCTACCTGTAATGATTGCCATAAAGTTTTTAAAGGCAAACATTCGCTTATAGCTCATATTCAATCAGTTCATAATATCAGCGAGAAAGACGCTATTAAATGCCACTTGTGCGAAAAAGTGTACACTAACAATAGGAACTTGAAAAGGCATATAGAAATGTTTCACGGTGTAAAGGGGGAATTCAGATGTGATATCTGCCCTAAAGTGTATACTTCGAATCAGAGTTTACGTCGGCATGCCCGAACGAGGCATAGTACTGATAATCAAGAACATTTAACGTGCAACTTTTGCATGAAAGTCATAATAGGACGAGAGAATTTCGAAAGCCATGTGCAATTTCATCACCAGGACACCGAAATAGATAACAAGAACGTAGAATACGTCTGCGAATCGTGCGGTCAAAGTTTCGAAGAAGAAACTGTATTGCGACAGCACGTGAAATCGGAGCATTCTTTTAAAACGTTCTACAAGTACTGCAAAAAGTCCTTGCTGAAACAGTATGGGATGGACACACAAAACATATACAACTGTGAATATTGTGATAATTCCTTTTTAACGGTCTACGAGTTGAAAGATCATATGCGGATGAACCATGATATAGAGTACTCCCTATCAACCTGCAATGTATGCTTCAATAAGTTTTTCAGTCATGAAACGAGAAGCGCACATAGGAACATCTGTCTACCGCCCCCAAACGTCAACACTTGCAGTTACTGTGATAAATTATTCACTGATATTTCTAGCTTGGAGTTCCATAAGAGGATCTTTCATCCACAGTCTCAAATCGCAGATTCCAACATTTCGTCAACGAATATTGATGAGGACATTCTGTCGTTTAAATGTGAGCATTGCGATCGCATTTACTACAGCGAGAGATCCCTCAAACATCATATTAAGCTAAAACATACGACAGATGAGGAAGTAGAATGCCAACTGTGTGGCAAAATCTGCAGCAACAAGTACTACTTAGCGTCACATACAAAAATAGTCCATAACAACGACTCTTGGTCTCGCTGCGAATATTGCGATAAACAGTTTAAATCTAAAAGAAATATCCGACGACATATTGAGTATACTCATTTAGGCATGCAAAGATACAAATGTATTGAATGCGAGACCTTGTTCAAAGAAAAACGGAGCCTAAGAAAGCATGTGCGGACAAAACATCCCAATTCTGCCGCTTTCCCGCAATGCCATATATGTCACAAACGGTTTGAATCCGccaaatcatgtaagatacatCTGAAACTGGTGCATTCTTTCAATATGAACACATATCCTTGCCACTTATGTTCAGTGTCATTCAGTTCCAACGAGGCTTTGACTATACATCTAGAAACGAAACATTTAGCCGAAGATCAGATCTACAAATGCGAAGAGTGCAACTTGGTTTTCAAAGGGCAGGAAAAATTCGACGCTCACAATGACGTTTGTCACGTCAATCTAGTCCCTACAATCAAGCAGAAAGTCCTACCAAGATGTATACTCTGCATGAAAGATTTTAGCACGCGAAAAACATTGAAACGTCACATCAAAAAATTCCATGAAGAATTTGACGTGGACGAATTAGCGACTTTTGGTTCTAGACGCAGAACTTTCACAGTAGATTGCGAGAACTGTATTAAGAATTTCAACGACGATTTTCATTTGAGCGTCTATAACAAGCTGAAACATTTAAGGGACACTGAAATATTTAAGTGTCAAACTTGTTTCGAGTCTTACAATTCCCTAGAGTACGCTATCCAAAGGTATAAGCTGACGAATGCAGACGCTTGCAAATCAAAGATGATTCTAAGCGAGCTGTGTACAACTGAGATGAGCGAAGAAGAAAATGATTTCTCTCATTTCGGGGAGTTACATGACATGTTGCCTGAGAGTACGACTAGTGAAGTTATCATCAAGTCTGAACCTTTCGAAGATTCTGAGTCGGAGGTAAAGATGGAACCGGCTTCGCCGTAA
Protein Sequence
MYTNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICGQNFGSPAGLLQHLSRGHNNYGQPFPECELCGRIFTRKQNINSHMITVHLQGLGYEIRCRLCEKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNISEKDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHSTDNQEHLTCNFCMKVIIGRENFESHVQFHHQDTEIDNKNVEYVCESCGQSFEEETVLRQHVKSEHSFKTFYKYCKKSLLKQYGMDTQNIYNCEYCDNSFLTVYELKDHMRMNHDIEYSLSTCNVCFNKFFSHETRSAHRNICLPPPNVNTCSYCDKLFTDISSLEFHKRIFHPQSQIADSNISSTNIDEDILSFKCEHCDRIYYSERSLKHHIKLKHTTDEEVECQLCGKICSNKYYLASHTKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLVHSFNMNTYPCHLCSVSFSSNEALTIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNDVCHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCENCIKNFNDDFHLSVYNKLKHLRDTEIFKCQTCFESYNSLEYAIQRYKLTNADACKSKMILSELCTTEMSEEENDFSHFGELHDMLPESTTSEVIIKSEPFEDSESEVKMEPASP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00447464;
90% Identity
iTF_01535147;
80% Identity
iTF_00928912;