Lyun024949.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lycocerus yunnanus
Gene Symbol
nfxl1
Assembly
GCA_036346125.1
Location
JARFIX010000069.1:1703492-1710268[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2.2 2.4e+04 -3.3 0.3 14 18 105 109 105 110 0.73
2 20 4 4.3e+04 -5.0 1.9 15 19 149 153 149 153 0.85
3 20 0.25 2.7e+03 -0.3 0.4 4 10 184 190 183 190 0.95
4 20 5.7e-06 0.061 14.6 18.4 1 19 198 215 198 215 0.99
5 20 4 4.3e+04 -5.1 0.9 6 18 241 245 241 246 0.43
6 20 8.9e-07 0.0095 17.2 16.5 3 19 253 269 251 269 0.92
7 20 1.4 1.5e+04 -2.6 1.9 6 10 294 298 293 298 0.90
8 20 1.1e-08 0.00011 23.3 5.7 1 18 304 321 304 322 0.98
9 20 1 1.1e+04 -2.2 1.4 5 10 346 351 346 351 0.95
10 20 3.8e-06 0.041 15.1 10.4 1 18 357 374 357 375 0.99
11 20 0.15 1.6e+03 0.4 15.1 1 18 409 426 409 427 0.94
12 20 4e-10 4.3e-06 27.8 12.8 1 18 436 453 436 454 0.97
13 20 1.2 1.3e+04 -2.4 1.0 5 10 482 487 482 487 0.94
14 20 0.0028 30 6.0 8.8 10 19 503 512 500 512 0.89
15 20 0.0025 26 6.1 5.9 1 12 522 532 522 532 0.90
16 20 4 4.3e+04 -6.9 4.5 14 18 560 564 560 564 0.86
17 20 4.5e-05 0.48 11.7 6.1 1 11 601 611 601 612 0.97
18 20 4 4.3e+04 -4.4 0.8 5 10 628 633 628 633 0.87
19 20 2.1e-05 0.23 12.7 14.2 3 19 642 658 641 658 0.94
20 20 2.8e-05 0.3 12.4 12.5 1 18 701 720 701 721 0.89

Sequence Information

Coding Sequence
ATGGCGATACTGTATCCCCTACTCAACAAAGGCGTCAACAGCACCTCAAAATCGgagaaaaaatttcaagaagtgcaagaaaaattacaagcAGCTGTTAAGAAGCATGTAAAGGAATATGACTCTTCATCGGAGGAAGAAGAGTTAGAATCAAGTAGCATACTAGAATCAATTTTGAAGACTTACCATCAAACTGGAGCATCTAGTAATGGTTTACAGAGAACTCAAGAAATTATAAGTGATACCTTTTCATCTGGAACCACCACGTGTTTAATATGCATATCATCGATTAAGAGAAACGAATCGGTATGGAATTGTGGAGAATGTTATTGTATGTTTCATTTATTATGCATACAACGTTGGTCAAAGGATACTGTAGTTCAACAAAAACAAGCATTGGAAGGCCCAATTGTGGTTTCTTACAAAAAGGAAATTACATGGGGATGTCCCAAATGTAGACAAGAATATGGTCCCAATGATATTCCAACTACTTGCACCTGTTTTTGTAAGAAATCTGTTAACCCACAATTTCAACCATTTTTGGTACCTCATTCTTGTGGCGAGATATGTGGAAAGAATTTGAAGCCGCATTGCGGTCACGGTTGTGTATTACTCTGTCATCCAGgtCCATGTCCACCATGCCCTCAAATGGTAACAGTTACATGTTACTGTGGTGTAAAACCTCCTCAACCTCAGAGATGTTGCAATAAGGAATGGTCATGCGGATCAccatgtaataaattattgactTGCAAAAAACACAAGTGTTCACAACCTTGTCATCAAGGAGAATGCCAACCGTGTTCAAAAAAGAGCATTCAAAAATGCATATGTGGCTCAAACAGTAAATTAAGGAACTGTGCAAGCCCAATTTGGCAATGCGAGAAGGTATGTAATAAACCTTTGGAATGTGGGTTTCACAAATGCTTAGAGGTGTGTCACATTGGAGATTGTGATGTATGTGTTCTATCAAAATCTCGTACATGTCCTTGTGGTAAGTCCATATATAATTTGCCTTGTACCGAAGAAACTCCAACTTGTGAAGATACATGTGGAAAATTGTTGGAGTGTGGTGTTCACTCATGTAATCAGAGGTGTCATAAAGATAATTGCGGCACGtgttttcaAACTGTTACTAAAGTTTGTCGTTGTGAATTACATACCAAAGATGTTCAGTGTAGAAAAGTTTACTTATGTGACACTAAATGTAAGGAGATTAGAGACTGCAATAAGCACCCATGTAACCGTAAGTGTTGTGATAAAAATTGTTCACCATGCGAAAAACCATGTGGTCGTACTTTGTCTTGTGGAAATCacaaatgtacttcaatttgtcATCGTGGACCTTGTTATCCATGCAATCTAACAGAAAGTGTTAGTTGTTGTTGTGGAAAAACTGCAATTACGGTTCCATGTGGTAGAAAACAGAAAACCAAGCCTCCAAAATGTAATAAGTTGTGTTTtaatccTCCAAATTGTCATCATGTTAAGCGCGAAGAGCATCATTGTCATTTTGGCGATTGTCCACCTTGCAAGCAAATATGTAATCTTAACAGGAAAAATTGTTCTCATAAGTGTTCCGCTCCTTGTCATTCTGCAGTTCTTGTTAAAGTTGAATGTGAAAAGCCATCCATGCCTTGGGAACAAGTAAAACCTCAACTAGAATTAAAAGCACTGCCATGCCCCGATTGTATAGTTGATGTACCCATGACTTGCTTAGgAAAACATGAGACTTCTAATTttcgttgccatatggcaagaGTTTCGAGCTGTGGTAGAGCATGCGGTCGATTATTAGAGTGTGGTAACCACCAATGCTCCCAAATGTGTCATTTGGTGGAAAATGCCAAAAATGAACTATTGGCTGGAagcaattgtgaaaaatgtgaCAAGGCATGTGAAAAGGCTCGGCCAGAAGGATGTCAACATATTTGTTTTAAACCATGTCATCCTGGTGCGTGTCCACCTTGTAAGCAAATGATTCGTTTGAAATGCCACTGTGGTCTTAATCAACCATACGTTTTATGCAGCACTTGGACATCCACTGACAATAAAGAAGAATTACAAACTTGTGGAGACCGATGccctaaaaatTTTGAGTGTGGCCATCGTTGTCGTTCTAACTGCCATTCAGGCCCATGTGTTACTTCTGAACcatgtaagaaaaaaattaaagtgactTGTAGTTGTAAACGTATTAAGAAGGATTTCACGTGTGAAATGGTAAAATCAAAACTTGCCGCTGTGGAATGTGACGATCTATGTTTGAAAaaacaagaagaagaaaagaagttGAAAGACAAAGAAGACGAAATTAAGAAGAAAGAGGAAGACTTGAAAAATAAGATTGAATTAGAGAAGTTTGAAAAGAAGTTTCAAGGAAAGAGGCGGTACAAGGAGAAACGTGTTATTAATGAATCTGACAATCGTTCCTTGGTTCAAAAACATTGGTTGATGATTTTATCTCTTATGATTCTTATTACTTCCGtggtgttttattatttacttttttaa
Protein Sequence
MAILYPLLNKGVNSTSKSEKKFQEVQEKLQAAVKKHVKEYDSSSEEEELESSSILESILKTYHQTGASSNGLQRTQEIISDTFSSGTTTCLICISSIKRNESVWNCGECYCMFHLLCIQRWSKDTVVQQKQALEGPIVVSYKKEITWGCPKCRQEYGPNDIPTTCTCFCKKSVNPQFQPFLVPHSCGEICGKNLKPHCGHGCVLLCHPGPCPPCPQMVTVTCYCGVKPPQPQRCCNKEWSCGSPCNKLLTCKKHKCSQPCHQGECQPCSKKSIQKCICGSNSKLRNCASPIWQCEKVCNKPLECGFHKCLEVCHIGDCDVCVLSKSRTCPCGKSIYNLPCTEETPTCEDTCGKLLECGVHSCNQRCHKDNCGTCFQTVTKVCRCELHTKDVQCRKVYLCDTKCKEIRDCNKHPCNRKCCDKNCSPCEKPCGRTLSCGNHKCTSICHRGPCYPCNLTESVSCCCGKTAITVPCGRKQKTKPPKCNKLCFNPPNCHHVKREEHHCHFGDCPPCKQICNLNRKNCSHKCSAPCHSAVLVKVECEKPSMPWEQVKPQLELKALPCPDCIVDVPMTCLGKHETSNFRCHMARVSSCGRACGRLLECGNHQCSQMCHLVENAKNELLAGSNCEKCDKACEKARPEGCQHICFKPCHPGACPPCKQMIRLKCHCGLNQPYVLCSTWTSTDNKEELQTCGDRCPKNFECGHRCRSNCHSGPCVTSEPCKKKIKVTCSCKRIKKDFTCEMVKSKLAAVECDDLCLKKQEEEKKLKDKEDEIKKKEEDLKNKIELEKFEKKFQGKRRYKEKRVINESDNRSLVQKHWLMILSLMILITSVVFYYLLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01294648;
90% Identity
iTF_00269428;
80% Identity
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