Lyun018423.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lycocerus yunnanus
Gene Symbol
Hr39
Assembly
GCA_036346125.1
Location
JARFIX010000038.1:3194488-3201406[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.41 1.8e+04 -4.0 6.0 105 160 174 227 105 303 0.45
2 4 1.9e-08 0.00081 20.1 0.0 1 21 389 409 389 416 0.90
3 4 5.6e-05 2.4 8.7 1.1 55 148 417 504 409 526 0.59
4 4 5.1e-74 2.2e-69 236.1 0.1 202 408 521 722 508 722 0.97

Sequence Information

Coding Sequence
ATGGCCACAAACATGAGATCACCAAACGTGTCTATCACCACCATCAACGTGGACCCCTATCCGCCGACTTCTCTATCCAACGGCAGCATCCCAAAAACCACCCCCGCGTCCGCAGATTCTCAATACGCATCTTCGCCTTCCACATTAAATGATGGAGATATTTTGGATAACAGTTTGGACGCAGAGGTGGCCCAGATCGATTTTCACGCATCTTCCGTTAATTTGCGTAACAAAAAGAAATGGGAGGAGAACGACGCAGCTAGGCCCATGTCTTGGGAAGGCGAACTCTCGGATGGGGAAAGGGACATGTGTATAGATGTAGACGAAAGATCTCAGcaCACCGAAAAGCTTTCTTATGTTCAATCGAAACAGAACCTTCCATTATCCGAATTAAAGGAAAGTCCCATACTGAGAATAAAGCAACCTGCGGTGAATAATTATTCCCTTCACAGTACACCAAACAATTCGCCTCTGTTAAGCCAACGTCATGCGGCTGCGCCGGTTCTCAGTCACAAAGAAATTCTCCATAAAACCTTAAACATACCGGCAACTCCGAGTCCCGATTCGGCCATACATTCTGGTTACAGTGTGTTCAGTTCTCCAAGTCAGAGTCCTCTGACTCAAAGACACTTAACTCCTAGTTTAAGTCGTAACAATAGTGATGCTTCTCATTCGAGTTGTTGTAGTTATTCCAGTGTATCCGTGTCCGTTTCTCCTACTCAACAATTTTCGCCCACTCATAGTCCTATACAGgGTCGTCATCATATGCTAGGTGGAATTCACAATAGTCCGTTACATCACAACATTTTATATCGTAGTTTACAAGACGAAACGTCGAATTTACAATATCCTAGCGAACAAGAAAGTTTAGAGGAAGTAGAAGATAAGACTGGTTTAATTCACACATCTCTTCCTGCCCAACCGGGAATCTCGCGACAACAACTGATAAATAGccCGTGTCCAATATGTGGCGATAAAATATCAGGATTTCATTATGGAATATTTAGTTGCGAATCCTGCAAAGGTTTTTTTAAACGCACAgtgcaaaatagaaaaaattacgtTTGTTTGCGAGGCGCCGCTTGTCCAGTTACGGTTGCAACAAGAAAAAAGTGTCCGGCTTGTAGGTTCGAGAAATGTTTACAATGCGGAATGAAGCTTGaagCCATACGAGAAGACCGAACGAGAGGTGGGCGGTCCACCTACCAGTGTTCGTATTCCCTTCCGCCATCGTTAACTGGACATTCGGAATTAAGGAGCAGTTCGTCTGATCTGCGACAAAATTACGGCGATTCGCCGCAGGTTTTAAGAGTGAAAGTCGAACCGGCTGAATCGAATTCGTATACGCAGCGGTCTTCACACAGTTCCAGATTAGGGGTCCCGCCGTTATTGCAGgAAATAATGGACGTGGAGCACCTGTGGCATTACAACGAGATGAGAACTTTTAAAGAGGGTGCGTCGAGTATGGACAAAGCAAGTTCTAGCAGCTCTTCTTCTTCCTCCTCTTCGGTACCAAACTTATCGCAACATCCCTTGCTAGGTAGTACGGCGTTGGCAAATTCGTCAGAGAACACTCCCGATTTTGTGGCCAATTTGTGCAACATAGCCGACCATCGGTTGTATAAAATTGTTAAGTGGTGTAAAAGTTtaccattatttaaaaatatttctatcgACGatcaaatttgtttgttaataaattcTTGGTGCGAATTGTTATTGTTTTCGTGTTGTTTTCGATCCGTGTCGAGTCCTGGAGAAATCAGGGTGTCCTTAGGAAAGAGCATTAATTTAGAACAAGCAAAGGAGATGGGATTGGGGGTTTGTATCGAAAGGATGTTAAATTTTACCGATCATCTTAGAAGGTTGAGAGTGGATCAGTATGAATATGTTGCCATGAAAGTTATCGTTTTACTTACATCGGatACGTCGGAGTTGCGTGAACCCGAGAAGGTTAGAGCGTCGCAAGAGAAGGCTTTACAAGCTTTGCAGCATTACACTTTGGCTCACTATCCGGATGCGCCTGCCAAGTTTGGCGAACTTTTACTTAGGATTCCCGAATTGCAACGAACGTGTCAgGTTGGGAAGGAGATGTTGACGATAAAATCGAAAGACGGCGAAGGGCCAAGTTTTAACCTGCTCCTGGAGCTACTTCGTGGGGACCATTAG
Protein Sequence
MATNMRSPNVSITTINVDPYPPTSLSNGSIPKTTPASADSQYASSPSTLNDGDILDNSLDAEVAQIDFHASSVNLRNKKKWEENDAARPMSWEGELSDGERDMCIDVDERSQHTEKLSYVQSKQNLPLSELKESPILRIKQPAVNNYSLHSTPNNSPLLSQRHAAAPVLSHKEILHKTLNIPATPSPDSAIHSGYSVFSSPSQSPLTQRHLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHHMLGGIHNSPLHHNILYRSLQDETSNLQYPSEQESLEEVEDKTGLIHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTGHSELRSSSSDLRQNYGDSPQVLRVKVEPAESNSYTQRSSHSSRLGVPPLLQEIMDVEHLWHYNEMRTFKEGASSMDKASSSSSSSSSSSVPNLSQHPLLGSTALANSSENTPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVSSPGEIRVSLGKSINLEQAKEMGLGVCIERMLNFTDHLRRLRVDQYEYVAMKVIVLLTSDTSELREPEKVRASQEKALQALQHYTLAHYPDAPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLLELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00951009;
90% Identity
iTF_00271366;
80% Identity
iTF_00927801;