Lyun014267.1
Basic Information
- Insect
- Lycocerus yunnanus
- Gene Symbol
- tfip11
- Assembly
- GCA_036346125.1
- Location
- JARFIX010000025.1:1193606-1201925[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-95 1.4e-90 304.9 9.8 1 275 115 386 115 386 0.98 2 2 0.097 2.1e+03 -0.7 0.1 243 270 399 426 391 431 0.65
Sequence Information
- Coding Sequence
- ATGACTGGGCCACATCAACGAGTTCTGAGCGGCTATCATGCTTTAAGTGGTTTAAAAGCGCCACCAGGAGTTGAACACTTTGAAGACGTCGTTCATAAGAAGTGTTCCAACTTTGCTTTGCCCGAAATTCAACACAATTTGGACCTTTTAGTGAGCATGTGCGAACAGGACATAATCAACACTGATCGGAACACTCGATATTGTCAGGACAAGGAGGTCAACTTAAAACAAGAAGAAGTTACAGTGACCAAACTTTTAGAGGAAGAAAACATTGAAATTGAAAACCTTTCCAGTATTCTCGACCAGGTCAAGAAGCTGATCGATCCCACTCAAGATTTTTCACTTGGGCAGTTTGCACACATATTCACAGAGTTACAGgaaaCTTATACAAACGATTATCACGTTTACCGGTTATCTGAACTGGCGCCCGGATTGGTTGGACCATTAATAACGTCAGCACTGGCAAGTTGGTCGCCCTTAGCAGCGCCAAGACAATATGTTGACGTATTTCTGCAATGGAAGGATATCTTGGAAAAACCCCAACAGCGTGGGACTATAGAAGGTAATTGTATGGGAATTCAGCCGTATGATAGTCTCGTATGGCACACTTGGGTGCCTGTATTGAGATCTTGCGTTAGCGCATGGAATGTTCGTGACTGTGACCCATTAATTTCACTATTGGAGACATGGAAACCTGCATTACCTCACTGGATTATGGATAATATTCTAGACCAACTGGTAATGCCCAGATTAGGCACGGAAGTGAACAATTGGAATCCGCTCATCGACACAGTACCAATCCACTATTGGATCCACCCATGGATACCTATACTAGataCGAGGCTGAACACGGCGATTTTCCCaataataatggaaaaattaGGATCTGCACTGACTAACTGGCATCCTACAGATCGTTCTGCTCTTCTAATGTTAAAACCCTGGAAGGAAGCGTTACCCAGTGGTTCCTTTACAGCTTTTGTAGTGGCACACATTGTGCCCAAGTTGCAGCTATGCATGGAATCTTTGGTCATTAACCCCCACCAACAGCACCTGGATTCCTGGAATGCAGTAATGGATTGGAAAGACATGTTATCCGTCGTTAACTTGGCcctaattttacaaaagtattTCTTCCCACGTTGGTTGAAAACGCTGGGAATATGGTTAAACCACAAACCGGATTACAACCAAATCACGGAATGGTATTCCGGATGGAAGCAGCTGATACCTAAAGAAGTGTTAATTCAGCCAACCATCAAAGACAACTTTAATCAGGCACTTGAAATGATGAACGGTGCAGTCAACACCGAATCCCAACCTCAGCCTGGTGCTAAAGAATCCGTTTCCTATCTTACCAACATTGAAACAAACGCGCCACCTCCACCACCACCAAAAACAGAAATGTTGCCCGATATCATACACACATCTTATCAAAAACTCCAAGGTATTAAAGAAGTTCTCGGGAGGCATTGCGAGAAAAACGGTATCTTATTTGCACCAATCAACAATAAGTTTTACGAAGCTAAGCAAGTTTATCGTGTGGGTTCAAGTGGAATTCAAGTCTATTTTGATCGACATGTAATTTTTTACTCACAAAATAATTCTTCGTGGTTACCAATTTCACTGGATAGAATACTAGATAAAGTGACTTAA
- Protein Sequence
- MTGPHQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVSMCEQDIINTDRNTRYCQDKEVNLKQEEVTVTKLLEEENIEIENLSSILDQVKKLIDPTQDFSLGQFAHIFTELQETYTNDYHVYRLSELAPGLVGPLITSALASWSPLAAPRQYVDVFLQWKDILEKPQQRGTIEGNCMGIQPYDSLVWHTWVPVLRSCVSAWNVRDCDPLISLLETWKPALPHWIMDNILDQLVMPRLGTEVNNWNPLIDTVPIHYWIHPWIPILDTRLNTAIFPIIMEKLGSALTNWHPTDRSALLMLKPWKEALPSGSFTAFVVAHIVPKLQLCMESLVINPHQQHLDSWNAVMDWKDMLSVVNLALILQKYFFPRWLKTLGIWLNHKPDYNQITEWYSGWKQLIPKEVLIQPTIKDNFNQALEMMNGAVNTESQPQPGAKESVSYLTNIETNAPPPPPPKTEMLPDIIHTSYQKLQGIKEVLGRHCEKNGILFAPINNKFYEAKQVYRVGSSGIQVYFDRHVIFYSQNNSSWLPISLDRILDKVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -