Basic Information

Insect: Lycia hirtaria
Gene Symbol: stc
Assembly: GCA_947563715.1
Location: OX387384.1:36266503-36282411[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 2.8e+04 -4.4 1.6 15 19 545 549 544 549 0.81

2 15 0.041 5.8e+02 1.3 1.2 2 10 577 585 577 585 0.93

3 15 3.9e-05 0.55 11.0 18.1 4 19 593 608 591 608 0.93

4 15 2.7e-05 0.38 11.5 12.0 1 19 644 662 644 662 0.97

5 15 1.1 1.6e+04 -3.3 1.8 7 11 666 670 666 672 0.89

6 15 7.9e-05 1.1 10.0 10.6 1 18 701 718 701 719 0.97

7 15 0.0001 1.5 9.6 11.2 1 19 760 782 760 782 0.87

8 15 2 2.8e+04 -5.4 2.2 6 10 812 816 812 816 0.94

9 15 0.00047 6.7 7.5 7.9 1 13 822 834 822 834 0.98

10 15 0.02 2.8e+02 2.3 0.3 2 10 835 843 835 843 0.94

11 15 5.5e-08 0.00079 20.0 14.5 1 19 849 867 849 867 0.99

12 15 1.3 1.8e+04 -3.5 0.7 6 10 896 900 895 900 0.86

13 15 0.002 28 5.5 11.8 10 18 914 922 908 923 0.93

14 15 4.6e-08 0.00066 20.3 14.0 1 17 959 977 959 983 0.85

15 15 0.2 2.8e+03 -0.9 17.7 1 19 989 1006 989 1012 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	2.8e+04	-4.4	1.6	15	19	545	549	544	549	0.81
2	15	0.041	5.8e+02	1.3	1.2	2	10	577	585	577	585	0.93
3	15	3.9e-05	0.55	11.0	18.1	4	19	593	608	591	608	0.93
4	15	2.7e-05	0.38	11.5	12.0	1	19	644	662	644	662	0.97
5	15	1.1	1.6e+04	-3.3	1.8	7	11	666	670	666	672	0.89
6	15	7.9e-05	1.1	10.0	10.6	1	18	701	718	701	719	0.97
7	15	0.0001	1.5	9.6	11.2	1	19	760	782	760	782	0.87
8	15	2	2.8e+04	-5.4	2.2	6	10	812	816	812	816	0.94
9	15	0.00047	6.7	7.5	7.9	1	13	822	834	822	834	0.98
10	15	0.02	2.8e+02	2.3	0.3	2	10	835	843	835	843	0.94
11	15	5.5e-08	0.00079	20.0	14.5	1	19	849	867	849	867	0.99
12	15	1.3	1.8e+04	-3.5	0.7	6	10	896	900	895	900	0.86
13	15	0.002	28	5.5	11.8	10	18	914	922	908	923	0.93
14	15	4.6e-08	0.00066	20.3	14.0	1	17	959	977	959	983	0.85
15	15	0.2	2.8e+03	-0.9	17.7	1	19	989	1006	989	1012	0.73

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCGTACGTATACAACAACCAATACCAAGGTGCCACCAACTGGAATGGTGACATAAATGCCCAGTTCGTCAATCAGGGGTATTATGCTAGACCAGAAGGAGGCCCTCAATATGTTAGCTTTAACGAATTCATGAATCAGGTACGGGGTAATAATACTGGGGCGGGTAATACTACTAATTATAATAATGTACAGTATGAAAGTTACCCTGCTCAACAATATAATTACCAAAACATGCCATCTTCTTCCCAGACTCAGCTTACCAATTATAACTATTCAGTGTCTGCAAATATGCCAACTGATGTAAAGCCGTACCAACTAAATGCCCCAAGTCAATACAATCCTCCACCAGAAACAAATTCATACACTAGTGAGATGATATTGAATTCTAACCTCACTGCAACAGCAACTGAGTTTGTGCCAAAAAATGTTTTACAACCTTCAACAAGTGTTCAGAACATTCCAGAAGCATCTACCAGTCAAAAGGTTCCAAGTGATACTCAATCTAGTTATCATAAAAAACCTGGTGGTAGCTCATCTGACAAAAACTGGAGGGAACGGCCACAAAACTTTAAACCTGAAGCCACAAGCGAAGTGAAAGAAAAGTCGGTCTCAAACGGTCACTCACATGACAATGTTAAAAGCTATAGTAATAATACCCGTAATCGTGATACATATCGTAATAATGAGGGTAACAGCAGGCATTATGATAGTAAAACTCGAGATGCTACTAATAGAGATTATGAGTCAACATCACTGAGTCAAGAATCAAGCTCTCGGAATAATGAACCTGGTAGTCGAAATGAATCTAGTAGTAATAATCAAGAAACAAATAATCGTAGCCGTAACTATGAATCTAGTAATCGTAACAATGATACTAACAGTCATAGCTATGAATCTAACAACCAAAACCAAGATTCTAACAGCAGAAACCAAGATTCTTATAGTAGAAAACAAGATTCTCACAGTAGGAACCAAGAAAATCATAGTCGAAACTATGAAAATAGTAGCCGTAGTTCAGGTAGAAACTATGAATCTAATCGTAATCAAGAATCTAGTAGAAACCAAGAGCTTAGCAATAAAAATCAAGACTCCAACTCTCGTTATGACTCTAGCCGCAACGATAGACGAAATCAGTCTAAAGGCACCTCTAAATTCAAGGGGAAAGAGTCTGACAACCGTACATTCTACAATAGTTCTATACCCAAAGATCAAGATTCACGAGGAAGGGGTGAGGGAAATGGTAGAAATAGAAACTGGGTTGGAACTCAAAGATTACGTGGATCAGAACGGAACAATATGGAAGATGAGCAGTATGCCAGCAGCTACATGCCTCAGAAAGAAGAAAAGCATGAAAAAGATAGAGCTCTTAGGGCACAACATATAGCTAGTCCTGTTAGATTTAAAAGCAAACAAGGGGACCAGGCGAATAAAGAAATGACACAACGAGAGCGACTAACAGAACAATTAGATAAAGGCACGTTAGAGTGCCTTGTGTGCTGTGATCGTGTGAAGCAGATGGATCCTGTGTGGTCGTGCAGCAACTGCTACCATGTGCTGCATTTGAGGTGTATACGAAAGTGGGCGATGAGCAGTATGGTTGAGGGTAAATGGCGGTGTCCAGCGTGCCAGAACTCGAACGACACCATCCCTACTGAGTACCGGTGCATGTGCGGAGCAGTACGCGCGCCTGAGTACAATCGCACTAGCGGAGGTGCGCACACGTGCGGACGCGCATGTCGCCGCCCGCGGTCCTGTCCACACCCTTGCACGCTGCTCTGTCACCCAGGGCCCTGTCCGCCCTGCCAGGCTACCGTCACCAGGCAATGCGGTTGCGGTGCGGAGACTCGCTCCATTCTGTGCAGCAGCAAGTTGCCCCAAGTATGCGGGCGAACGTGCGGACGGAAACTGGAGTGTGGCGCACACGCCTGCACCAAGGAGTGCCACGAGGAACCCTGTGACACTTGCACGGAGACTGTTGAACAAGTATGCCACTGTCCGGCGGGTGTCCCCCGCACGGTGCCATGCACGGCGGAAGCGGGCGCGTCGTATTCGTGCGGCGGGTCGTGCGGCCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGCGCGGCGTGCCACGCGCCGCCGTGCGCGCCCTGCAACCTCCGCCCTCAGGCGGTCGACGCCTGCCCCTGTGGAAAGATGAAACTGGAGACGGGGGCTCGCAAGTCGTGCACGGATCCGATCCCGCTGTGCGGTAACATCTGCGCCAAGCCGCTGCCGTGCGGCCCGGCCGGGGACAAACACTTCTGCAAGATCGACTGTCATGAAGGGCAGTGCCCAGTGTGCCCAGATAAGACGCTGGTGCAGTGCCGGTGCGGACACTCGAGCCGCGAGATACCCTGCGCTGACCTCCCCGAGATGACCAACAACGTGCTCTGTCAGAAGAAATGTAACAAGAAGCTGTCGTGCGGACGGCACCGGTGTCGTGCGACGTGCTGCGCAGGCGGCGCGCACCGCTGCGCCGTGCCGTGCGGCCGCTCGCTTGCCTGCGGCACGCACCGCTGCGAGGACTTCTGCCACACCGGACACTGCGCTCCGTGCCCCAGGCTCAGTTTCTCTGAGCTGACGTGCGAGTGCGGCGCCGTGGTGGTGCTGCCCCCGGTGCGGTGCGGCACGCGGCCCCCCGCCTGCGAGGCGCCCTGCCGCCGGCCCCGGCCCTGCTCGCACCCGCCGCACCACTCATGCCACTCCGGTGACTGCCCCCCCTGCGTCGTGCTCACCACCAAGCGCTGCTACGGCGACCACGAGGAGCGTAAGACGATCCCGTGTTCCCAAGAGGAGTTTTCATGCGGTCTGCCGTGCGGCAAGCCGCTGCCGTGCGGGAAGCACACCTGCATCAAGACCTGCCACAAAGGACCGTGCGACACTGGCAAATGCACGCAGCCGTGCATGGAGAAGCGTCCGTCGTGCGGGCACCCGTGCTCGGCGGCGTGCCACGCGGGCTGCGGGGGCGAGTGCCCCTCCCCCGCGCCCTGCCGCCGGATCGTGCGCGCCGCCTGCCCCTGCGGCCGCCGCCACGCCGACCGCACCTGCAGCGACAACGCACGCGACCTCGCCAAAATGATGAGCGCGCTAGCCGCCACCAAGATGCAGGAAGGCGGCTCCGTCGACCTCTCAGAGGTGCAACGTCCCGCCAACATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTAGAAGCGCGCACCCGTCAACTAGCCCTGGCGCTCCAGATCCGCAACCCGGACGTGTCGGCGAAGCTGGCGCCGCGGTACAACGACAACCTGCGAGCCACGGCGGCGCGCGAGCCCGCCTTCGCGCAGCAGATACACGACGCGCTCACCGACCTCGTGCAACGCGCCAAGAAGTCGAAACAAAAGACGCGATCGCACTCTTTCCCGAGTATGAACTGGCAGAAGCGTCAGTTCATCCATGAACTGTCGGAGCACTTCGGGTGTGAGAGCGTCGCATACGACGCCGAGCCGAACCGGAACGTCGTCGCTACTGCCGATAGAGAGAAGTCGTGGCTGCCCGCCATGAGTGTACTAGAAGTGCTGGCTCGTGAGGCAGGCAAGCGGCGCGTGCCGGGGCCGGTGTTGCGCGCGCCGCCTGCGCCCGCGCACGCCTCGCGAACCGCTGCCACGTCAGCTGCGACTAACAAGTCTTCCGGAGGGGGGTGGGCGACGCTGACGTCATCGAACGCGTGGGCGGCGCGCAGCCAGCCCAAGCAGGCGCCGCCCGAGGCCAAGATAGATTACTTCGACAACCCGCCGGACAACTAG
Protein Sequence: MSQWNNSYVYNNQYQGATNWNGDINAQFVNQGYYARPEGGPQYVSFNEFMNQVRGNNTGAGNTTNYNNVQYESYPAQQYNYQNMPSSSQTQLTNYNYSVSANMPTDVKPYQLNAPSQYNPPPETNSYTSEMILNSNLTATATEFVPKNVLQPSTSVQNIPEASTSQKVPSDTQSSYHKKPGGSSSDKNWRERPQNFKPEATSEVKEKSVSNGHSHDNVKSYSNNTRNRDTYRNNEGNSRHYDSKTRDATNRDYESTSLSQESSSRNNEPGSRNESSSNNQETNNRSRNYESSNRNNDTNSHSYESNNQNQDSNSRNQDSYSRKQDSHSRNQENHSRNYENSSRSSGRNYESNRNQESSRNQELSNKNQDSNSRYDSSRNDRRNQSKGTSKFKGKESDNRTFYNSSIPKDQDSRGRGEGNGRNRNWVGTQRLRGSERNNMEDEQYASSYMPQKEEKHEKDRALRAQHIASPVRFKSKQGDQANKEMTQRERLTEQLDKGTLECLVCCDRVKQMDPVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNSNDTIPTEYRCMCGAVRAPEYNRTSGGAHTCGRACRRPRSCPHPCTLLCHPGPCPPCQATVTRQCGCGAETRSILCSSKLPQVCGRTCGRKLECGAHACTKECHEEPCDTCTETVEQVCHCPAGVPRTVPCTAEAGASYSCGGSCGRVLSCGAHVCRAACHAPPCAPCNLRPQAVDACPCGKMKLETGARKSCTDPIPLCGNICAKPLPCGPAGDKHFCKIDCHEGQCPVCPDKTLVQCRCGHSSREIPCADLPEMTNNVLCQKKCNKKLSCGRHRCRATCCAGGAHRCAVPCGRSLACGTHRCEDFCHTGHCAPCPRLSFSELTCECGAVVVLPPVRCGTRPPACEAPCRRPRPCSHPPHHSCHSGDCPPCVVLTTKRCYGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCSAACHAGCGGECPSPAPCRRIVRAACPCGRRHADRTCSDNARDLAKMMSALAATKMQEGGSVDLSEVQRPANMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYNDNLRATAAREPAFAQQIHDALTDLVQRAKKSKQKTRSHSFPSMNWQKRQFIHELSEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPAPAHASRTAATSAATNKSSGGGWATLTSSNAWAARSQPKQAPPEAKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00207523; iTF_00826501; iTF_00045063; iTF_00143572; iTF_00827670; iTF_00033501;
90% Identity: -
80% Identity: -