Basic Information

Insect: Hypomecis atomaria
Gene Symbol: stc
Assembly: GCA_964007245.1
Location: OZ023290.1:18938305-18950857[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 4.2e+04 -4.3 1.6 15 19 539 543 538 543 0.81

2 13 0.053 1.1e+03 0.9 1.5 2 10 571 579 571 579 0.92

3 13 3.7e-05 0.78 11.0 18.1 4 19 587 602 585 602 0.93

4 13 1.6e-05 0.34 12.2 13.8 3 18 640 655 628 656 0.85

5 13 4e-06 0.083 14.1 11.7 1 18 695 712 695 713 0.98

6 13 2.5e-05 0.52 11.6 11.8 1 19 754 776 754 776 0.87

7 13 2 4.2e+04 -5.3 2.2 6 10 806 810 806 810 0.94

8 13 0.00061 13 7.1 6.8 1 13 816 828 816 828 0.97

9 13 0.019 4e+02 2.4 0.3 2 10 829 837 829 837 0.94

10 13 5.3e-08 0.0011 20.1 14.5 1 19 843 861 843 861 0.99

11 13 0.003 64 4.9 11.7 1 18 900 916 900 917 0.82

12 13 3.1e-08 0.00065 20.9 13.5 1 17 953 971 953 977 0.85

13 13 0.15 3.1e+03 -0.5 14.7 1 16 983 1000 983 1006 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	4.2e+04	-4.3	1.6	15	19	539	543	538	543	0.81
2	13	0.053	1.1e+03	0.9	1.5	2	10	571	579	571	579	0.92
3	13	3.7e-05	0.78	11.0	18.1	4	19	587	602	585	602	0.93
4	13	1.6e-05	0.34	12.2	13.8	3	18	640	655	628	656	0.85
5	13	4e-06	0.083	14.1	11.7	1	18	695	712	695	713	0.98
6	13	2.5e-05	0.52	11.6	11.8	1	19	754	776	754	776	0.87
7	13	2	4.2e+04	-5.3	2.2	6	10	806	810	806	810	0.94
8	13	0.00061	13	7.1	6.8	1	13	816	828	816	828	0.97
9	13	0.019	4e+02	2.4	0.3	2	10	829	837	829	837	0.94
10	13	5.3e-08	0.0011	20.1	14.5	1	19	843	861	843	861	0.99
11	13	0.003	64	4.9	11.7	1	18	900	916	900	917	0.82
12	13	3.1e-08	0.00065	20.9	13.5	1	17	953	971	953	977	0.85
13	13	0.15	3.1e+03	-0.5	14.7	1	16	983	1000	983	1006	0.83

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATTCTTACGTATACAACAACCAGTATCAAGGTGCCAACAACTGGAACGGCGATATGAACGCCCAGTACGTCAATCAGGGATATTATGCTAGACCAGAAGGAGGTGCCCAGTACGTGAGCTTTAACGAATTTTTGAATCAGATGCAGACTAGTAATGCTGTCGCTGGTAACGCTACTAATTACAACAACGTCCAATATGAAGCCTTCCCTGCACAGCAATACAACTACCAAAATATGCCATCTACTTCACAAACCCAGCTCAACAACTACAACTATTCAGTGCCTGCAAACGTACCCAATGAAGTGAACACCTACCAACTGAATGCCCCAACTCAGTATAATCCTCCGACCGAGTCTAATTCTTATACCAGTGAGATGATATTGAACTCTAACCTCACTGCAACAGCAACTGAATTTGTGCCAAAAACTGTTTCACAACCAGCAACAAGTGTTCCTAACATTCCAGAAGCTTCTAATAGCCAAAATGTTGCAAGTGAAGCTCAAAGTAGTTACCATAAAAAACCTGCAGGTAGCTCATCTGACAAAAACTGGAGGGAACGGCCAAAAAATTCACAACCTGCTGAAACTAAAGAAAAGCCAGTCTCAAATGGTTACTCTCAGGAAAATGCTAAGAGCTCTAGTAACAATCCCCGTAATCGTGATACATATCGTAATAATGAGGGTAATAACAggcataatgataataaaaatcaagATACTAGTAATAAAGACTATGACTCCACACCTCATACTCAAGAGCCAAGCTATAAAAATAAGGAACCTAATAGTCGAAATGAATCTAGTGAATCTAGTAGTCATAATCAAGAAAGTAGTAGTCGTAATTATGATAATCGCAGCAGAAAATCCGAATCTAACAACCGCAAATATGAGTCTAACAATGAATCTAACAGCCGAAACCAAGATTCCTATAGCCGGAACCACGAAAGTCAAAGTCGTAACTATGACAATAGTAGCCGTAATTCAGGTAGAAACTATGAACCTAATACTCGTAATCAAGAATTTAGTAGAAACCAAGAGCTTAGTAACAGGGGTCAAGAATCCAATTCTCGGAACTATGAATCTAACAACCGGAATGAAAGAAGAAACCAGCAGAAAAACAACTCTAAATTCAAGGGGAAAGAGTCTGACAACCGTACTTTCTATAACAGTTCCATGCCAAAAGACCAAGATTCCCGAGGGGGGAGGGGCGAGGGAAGTGGTAGGAATAGAAACTGGGGAGGCAGTCAGAGGCTGCGAGGATCAGACAGGAATTACACAGAAGATGAGCAGTATGCCAGCAACTACATGCCaccaaaagaagaaaaatatgaaaaagagAGGGAAAGAGCTCCTAGAGTACAGAATATCTCTAGTCcagttagatttaaaaacaaacaaggGGACCAAGttaacaAAGAAATGACACAACGAGAACGGCTAGCTGAACAGCTTGATAAAGGTACACTGGAGTGCCTTGTGTGCTGCGATAGAGTAAAACAAACAGACCCAGTGTGGTCGTGTGGTAACTGCTACCATGTCTTGCATCTCAGATGTATTCGGAAGTGGGCCATGAGCAGTATGGTTGAGGGTAAATGGCGTTGTCCCGCGTGTCAAAACTCCAACGACACTATCCCAACGGAGTATCGGTGCATGTGCGGCGCAGTCCGTTCACCCGAGTACAACCGCGGCAGTGGCGGCGCGCACACTTGCGGGCGCTCctgccgccgcccgcgcgcctGCCCGCACCCCTGCACGCTGCTGTGCCACCCGGGGCCCTGCCCGCCCTGCCAAGCCACCGTCACTAGGCAATGCGGTTGTGGCGCCGAGACTCGCTCAATTCTCTGCAGCAGCAAACTGCCTCAAGAGTGTGGTCGAATTTGCGGACGAATGCTCGATTGTTTTGAACATCAGTGCCGCCAGTACTGCCACGAGGGGCCATGCGACTCCTGCGAGGAGAGTATCCAACAAGAATGCTTCTGCCCGGCGGTGATGTGCCGCACCGTCGCGTGCACGGCGGGCCAGATGCCTTGTTTCTCGTGCGGCGAGCCGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGGTCTGTCACTCGCCGCCGTGCCAGCCCTGCGCGCTGCTGCCCGCCGCGGTGCTCACCTGCCCCTGCGGCAAGATGAAACTGCAGGCCGATGCACGCAAATCGTGCACGGACCCAATCCCGCTGTGCGGCAACATCTGCGCCAAGCCGCTGCCGTGCGGCCCCGCCGGGGACAAGCACTTCTGTAAGCTCGACTGCCATGAAGGCCCGTGTCCCGCGTGCCCGGACAAGACGCTCGTGCAGTGCCGCTGCGGGCACTCGAGCCGCGAGATCCCGTGCGCCGACCTGCCCGAGATGGCCAACAATGTGCTCTGCCAGAAGAAATGTAACAAGAAGCTGTCGTGCGGGCGGCACCGGTGTCGCGCGGCGTgctgcgcgggcggcgcgcacCGCTGCGCCGTGCCGTGCGGCCGCTCGCTGGCGTGCGGCACGCACCGCTGCGAGGACTTCTGCCACACCGGGCACTGCGCGCCCTGCCCCCGCGTCAGTTTCTCGGAGCTGACGTGCGAGTGCGGCGCGGTGGTGATACACCCGCCGGTGCGGTGCGGCACGCGGCCGCCGGCGTGCGACGCGCCGTGCCGCCGCGAGCGCGCGTGCGGACACGCGCCGCTGCACTCGTGCCACGCCGGCGCCTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCTACGGCGACCACGAGGAACGCAAGACGATCCCGTGCTCTCAAGACGAGTTTTCCTGCGGCCTGCCGTGCGGCAAGCCGCTGCCATGCGGGAAACACACGTGCATCAAGACCTGCCATAAAGGGCCCTGCGACACCGCCAAATGCACGCAGCCGTGCATGGAGAAGCGTCCGTCGTGCGGGCACCCGTGCGCCGCGCCGTGCCACCACAGCGAGGGCGGCGAGTGCCCGTCCGGCGCCGCGTGCCGCCGGCTCGTGCGCGCCGCCTGCCCCTGCGGCCGGCGACACGCGGACCGCACCTGCTGCGACAACGCGCGGGACCTAGCCAAAATGATGAGCACGCTGGTCGCGACAAAGATGCAAGAAAACGGTTCCGTCGACCTCTCCGAAGTGCAACGACCCGCTAACATGCTGAAAACTCTAGAGTGTGACGACGAGTGTCGCGTGGAAGCCCGCACTAGGCAGATGGCGCTAGCACTGCAAATCCGCAACCCGGATGTCTCAGCGAAGCTAGCACCGCGGTACAACGACAAcctccgagccacggcagcgcgcGAGCCCGCCTTCGCGCAGCAAATACACGACGCCTTGACAGACCTCGTGCAACGCGCTAAGAAGTCTAAGCAGAAGACCCGATCGCACTCGTTCCCGAGTATGAACTGGCAGAAGCGTCAGTTCATTCACGAGCTGTCGGAGCACTTCGGCTGTGAGAGCGTGGCGTATGACGCAGAGCCCAATCGAAACGTCGTCGCTACTGCTGATAGGGAGAAGTCGTGGCTGCCAGCGATGTCGATACTGGAGGTGTTGGCGCGGGAAGCGGGCCGGCGGCGCGTGCCGGGGCCCGTGCTGCGCGCGCCGCAAGCACAGAGCACGCCgcacgccgcgcccgccgcaccGACCAACAAGTAA
Protein Sequence: MSQWNNSYVYNNQYQGANNWNGDMNAQYVNQGYYARPEGGAQYVSFNEFLNQMQTSNAVAGNATNYNNVQYEAFPAQQYNYQNMPSTSQTQLNNYNYSVPANVPNEVNTYQLNAPTQYNPPTESNSYTSEMILNSNLTATATEFVPKTVSQPATSVPNIPEASNSQNVASEAQSSYHKKPAGSSSDKNWRERPKNSQPAETKEKPVSNGYSQENAKSSSNNPRNRDTYRNNEGNNRHNDNKNQDTSNKDYDSTPHTQEPSYKNKEPNSRNESSESSSHNQESSSRNYDNRSRKSESNNRKYESNNESNSRNQDSYSRNHESQSRNYDNSSRNSGRNYEPNTRNQEFSRNQELSNRGQESNSRNYESNNRNERRNQQKNNSKFKGKESDNRTFYNSSMPKDQDSRGGRGEGSGRNRNWGGSQRLRGSDRNYTEDEQYASNYMPPKEEKYEKERERAPRVQNISSPVRFKNKQGDQVNKEMTQRERLAEQLDKGTLECLVCCDRVKQTDPVWSCGNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNSNDTIPTEYRCMCGAVRSPEYNRGSGGAHTCGRSCRRPRACPHPCTLLCHPGPCPPCQATVTRQCGCGAETRSILCSSKLPQECGRICGRMLDCFEHQCRQYCHEGPCDSCEESIQQECFCPAVMCRTVACTAGQMPCFSCGEPCGRVLACGAHVCRAVCHSPPCQPCALLPAAVLTCPCGKMKLQADARKSCTDPIPLCGNICAKPLPCGPAGDKHFCKLDCHEGPCPACPDKTLVQCRCGHSSREIPCADLPEMANNVLCQKKCNKKLSCGRHRCRAACCAGGAHRCAVPCGRSLACGTHRCEDFCHTGHCAPCPRVSFSELTCECGAVVIHPPVRCGTRPPACDAPCRRERACGHAPLHSCHAGACPPCVVLTTKRCYGDHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTAKCTQPCMEKRPSCGHPCAAPCHHSEGGECPSGAACRRLVRAACPCGRRHADRTCCDNARDLAKMMSTLVATKMQENGSVDLSEVQRPANMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYNDNLRATAAREPAFAQQIHDALTDLVQRAKKSKQKTRSHSFPSMNWQKRQFIHELSEHFGCESVAYDAEPNRNVVATADREKSWLPAMSILEVLAREAGRRRVPGPVLRAPQAQSTPHAAPAAPTNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927187;
90% Identity: iTF_00827670;
80% Identity: -