Lhir015769.1
Basic Information
- Insect
- Lycia hirtaria
- Gene Symbol
- Zcchc10
- Assembly
- GCA_947563715.1
- Location
- OX387380.1:12365131-12366639[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-10 4e-06 27.0 23.6 404 486 47 135 21 143 0.68
Sequence Information
- Coding Sequence
- ATGACTCTTGGAACATACAACAGACACCAAGCAGAGAGGAAGAAGCAAGCGGCGCTGGCAGCCGCTTTTCCACAAGGGATACGCTGTCAAAAGTGTCTCGAGTATGGCCACTGGAGTTACGAATGTAAGGGGAAGCGTAAGATACTGACACGCCCATCGCGTACCCAAGTGCTTAAAAAGAATCTAAAGGCTAAAGAATCGGAGACCAAGAAAGAAGATGGGTGCTGCAGTTCAAATGGCACCTGCAAAATACCCAACAAGAAAAGGCGCATCGAAAACAACAACTCCAGTTCAGAATCATCATCAGACAGTTCATCAGATTCTTCTGACAGTTCCGACTCGTCAGACAGTGACTCGAGCAGCAACTCTGACAGTGACAGCGAGAGTGACAGCGGAAGTGATTCTGGATCTTGCTCCGGGTCTGGCTCAGGTTGTGATTAA
- Protein Sequence
- MTLGTYNRHQAERKKQAALAAAFPQGIRCQKCLEYGHWSYECKGKRKILTRPSRTQVLKKNLKAKESETKKEDGCCSSNGTCKIPNKKRRIENNNSSSESSSDSSSDSSDSSDSSDSDSSSNSDSDSESDSGSDSGSCSGSGSGCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -