Lhir012809.1
Basic Information
- Insect
- Lycia hirtaria
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947563715.1
- Location
- OX387376.1:49259765-49289778[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-15 5.9e-12 45.7 0.0 1 42 157 199 157 201 0.92 2 2 1.7e-18 1.2e-15 57.6 0.0 1 43 364 407 364 409 0.95
Sequence Information
- Coding Sequence
- ATGTTCTGTGGTAGTGTCAAAATACATCAAGTCCAATGCTCCTTGTTCCAGAGTCCTGCGTCAGAGTCGGACAGCAGCTCAGTGTCGGGAGCGAAGAGCCCCGCGGCCGCGGCACCTCCTCTCCTACAGCATCTGCTGCAACTGTCGCAGAGCCCTCAAACGATAGCacagTTCCACCAGATGATAGCAGCCATAGCGGCGCTGGGCCAGGGTATGCCCACCTACACGCCGCAGTTCCCGCCCTGGATGATGCCGAGAATGGTGCAGAATCGACACCAGCCTGATACCAGGGCGGAAGACAAGCCAGCACCGTCCTCTCCAAGCCTGGGGGAGCAGCCCCTCGACCTGAGTGCCAAGTCTACCTCCAGCGCCAGCGGCACCCCGCCGCCTGACGCCAAGACCCTTGACAACCGACTGAAACGCGCCATATTAGACGGGGTGGGCAACAGTGCACCCAGACGGAGCTACACCGAAGAGGAGCTCCAGTGCGCCTTGCGAGATATTCAGTCAGGCAAGATGGGCACGAGGCGGGCCGCCCTCGTGTACGGGATCCCTCGCTCCACGCTCAGAAACAAACTCAACAAGCTCGGACTCATGACCGAAGCGCACGAGACAGACCCTGACAGCGACCCGGAAGGAACCGACTCCCCACCCTCAGTCATCCTCAAAATACCAACGTTTCCACCGCCGGACGACAAAAGCTCTTCCCCCGCAACCTCCGTCACCACCCCCATCACACCTTTAACACCGATGCTTCCCAACCTCTCAGGGCAGGTGAACCCTTCACCTTTACTCCTACCGCCGTCTGTCTACGCAGACTCTCCGTCATCCCAGCATCTATTTTCCCTCAACGACGTCATAGCGAAAAGCATCAGCCAAAAGTTTCAACAGCCACCGGACAGGCTTCATGCAGACTTGTCCTTTATGAGAGCGCCAGAAAGACACGTCTCAGTCATCAAAACGCCTCCAGATAATCAAAGAAATCAGTACCAAGGCCCAAGCAATTCAAGAAGTCAGCCGAACAACAACGGCCAGTCGGCAGCGGGCGGGAAAGGCACGAGACCCAAACGAGGGAAATACCGAAACTACGACCGGGATAGTCTGGTGGAGGCGGTGAAGGCCGTACAGAGAGGAGAGATGTCGGTGCACCGAGCCGGGAGCTACTACGGAGTACCTCACTCCACTCTGGAGTATAAAGTTAAAGAGCGGCATCTGATGCGGCCGAGGAAACGCGAGCCGAAACCACAGCCGGACGTGAAACCGCAACCACCGAAGCCGCCGCCGCCGAAGCCGGTGACGAAGCCCTTCTCAAACGGCATGAACGGGCCCGAGACGCCCGGCTATCCACCCGGATACCCACACTTCTGGCCGGGCGCGAGCTTCACCGCGCATCCTTCGCCGGAACTGTACGCGTCGCATATGATGCGGAGGCTTCGTGAGGAGGTCCCGCCGCCCGCGAACGGTTCCTTCCTGGAGGGGATTATAAGGTCGAGCCTGAAGCGGCCGGGCGCAGCGCTGCTGCAGCAGTTGAACGAGCCGCGCACCTCGATGGCGGAGTCACCGAGCCTGCTGCGGAGGCTAGCGGGCGAGCCGGACGATGGGCCGGCAGCGCGGTGCGCGCGCCTCGCTTCCACGGACCGGCAGCTCGCCGCCGAGATGCGTGAAACGGTGCAGCGGCTGCGCGCTGACAAGATGCGCCCGCGCAACGGCACCCCCACCCCCCCTGGCGCGGCGCCGCTGTCCCCGCCCCCCGCGCCTCCTGCGCCCCCCGACCGCGCCTAG
- Protein Sequence
- MFCGSVKIHQVQCSLFQSPASESDSSSVSGAKSPAAAAPPLLQHLLQLSQSPQTIAQFHQMIAAIAALGQGMPTYTPQFPPWMMPRMVQNRHQPDTRAEDKPAPSSPSLGEQPLDLSAKSTSSASGTPPPDAKTLDNRLKRAILDGVGNSAPRRSYTEEELQCALRDIQSGKMGTRRAALVYGIPRSTLRNKLNKLGLMTEAHETDPDSDPEGTDSPPSVILKIPTFPPPDDKSSSPATSVTTPITPLTPMLPNLSGQVNPSPLLLPPSVYADSPSSQHLFSLNDVIAKSISQKFQQPPDRLHADLSFMRAPERHVSVIKTPPDNQRNQYQGPSNSRSQPNNNGQSAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPPPPKPVTKPFSNGMNGPETPGYPPGYPHFWPGASFTAHPSPELYASHMMRRLREEVPPPANGSFLEGIIRSSLKRPGAALLQQLNEPRTSMAESPSLLRRLAGEPDDGPAARCARLASTDRQLAAEMRETVQRLRADKMRPRNGTPTPPGAAPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818280;
- 90% Identity
- iTF_00033741;
- 80% Identity
- -